Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_L06
(614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06) 48 8e-06
SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09) 47 1e-05
SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 43 2e-04
SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 43 2e-04
SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 4e-04
SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 5e-04
SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0) 41 0.001
SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.002
SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.002
SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0) 40 0.002
SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.002
SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4) 39 0.004
SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.) 39 0.004
SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0) 39 0.004
SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0) 38 0.005
SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44) 38 0.009
SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28) 37 0.011
SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.020
SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24) 36 0.026
SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0) 35 0.046
SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061) 35 0.046
SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07) 34 0.080
SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14) 34 0.080
SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.080
SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.14
SB_8891| Best HMM Match : Zot (HMM E-Value=2.5) 33 0.18
SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36) 33 0.18
SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05) 33 0.24
SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0) 33 0.24
SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021) 32 0.32
SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.42
SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36) 32 0.42
SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.74
SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.3
SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37) 30 1.7
SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0) 29 3.0
SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 29 3.0
SB_24381| Best HMM Match : MMR_HSR1 (HMM E-Value=2) 29 4.0
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 28 5.2
SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13) 28 5.2
SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0) 28 5.2
SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_15837| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0) 27 9.1
>SB_36627| Best HMM Match : ABC_tran (HMM E-Value=5.4e-06)
Length = 240
Score = 47.6 bits (108), Expect = 8e-06
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +3
Query: 330 VRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI- 506
V++ H+ YG + IL GL+ V G + LLG +G GKTTLL C++G G +
Sbjct: 86 VQQLHQYYGGSH----ILRGLSFDVKVGEVTCLLGRNGVGKTTLLKCLMGLIPAKEGAVQ 141
Query: 507 WVLXXXXXXXXXXXXXXXXXYMPQEVALFGEFSIRE 614
W Y+PQ +FG ++ E
Sbjct: 142 WEGQPITGFKPHQRVHAGIAYVPQGREIFGRLTVEE 177
>SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09)
Length = 562
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/121 (21%), Positives = 51/121 (42%)
Frame = +3
Query: 252 ELIXRRNRMFKTQKSTVASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLL 431
+++ + R+ + + V+ K++G K V++ + V G ++GLL
Sbjct: 266 DVMAEKERLLGNDFGRQGNNTEYTATVKGLWKKFGRGKKGKVVVKDVYFGVTPGEVFGLL 325
Query: 432 GASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXXXXXYMPQEVALFGEFSIR 611
G +G GKTT L+ + + G + V + PQ+ ALF + ++
Sbjct: 326 GPNGAGKTTTLNMMTAGIPASRGSVSV-AGYDLQTETHKVFQHMGFCPQQDALFDDITLE 384
Query: 612 E 614
E
Sbjct: 385 E 385
>SB_16306| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 958
Score = 44.4 bits (100), Expect = 7e-05
Identities = 21/56 (37%), Positives = 32/56 (57%)
Frame = +3
Query: 345 KRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
K G + N IL +N V G + L+G SG GKTTLL+ + GR ++G++ +
Sbjct: 13 KNIGVSINGREILKTINGKVRPGEMLALMGPSGSGKTTLLNVLAGRMAKDAGDVLI 68
>SB_30636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/72 (36%), Positives = 37/72 (51%)
Frame = +3
Query: 297 TVASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIV 476
T S V ++ K YG+ N +L G+++ VA G + L+G SG GK+TLL C+
Sbjct: 13 TSGSVHAAGVSLKDLRKSYGS----NEVLKGISLDVAPGEVVCLIGPSGSGKSTLLRCVN 68
Query: 477 GRRXLNSGEIWV 512
N G I V
Sbjct: 69 LLEQPNEGTIHV 80
>SB_36388| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1570
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/44 (38%), Positives = 29/44 (65%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
L +N+ + GS+ ++G GCGK+TLLS ++G +GE++V
Sbjct: 564 LHNINLNIPDGSLVAVVGQVGCGKSTLLSALLGETEKVTGEVYV 607
>SB_31867| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 674
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
LDGL+ V G + G++GA G GK++LL+ I+G L+ G I V
Sbjct: 368 LDGLSFDVPSGCLLGVIGAVGSGKSSLLNAILGELPLSEGSIRV 411
>SB_20992| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 641
Score = 42.7 bits (96), Expect = 2e-04
Identities = 20/44 (45%), Positives = 29/44 (65%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
LDGL+ V G + G++GA G GK++LL+ I+G L+ G I V
Sbjct: 37 LDGLSFDVPSGCLLGVIGAVGSGKSSLLNAILGELPLSEGSIRV 80
>SB_36385| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 42.3 bits (95), Expect = 3e-04
Identities = 15/41 (36%), Positives = 28/41 (68%)
Frame = +3
Query: 390 LNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
+N+ + +GS+ ++G GCGK+TLLS ++G G+++V
Sbjct: 296 INLNIPEGSLVAVVGQVGCGKSTLLSALLGETEKTKGQVYV 336
>SB_34083| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 580
Score = 41.9 bits (94), Expect = 4e-04
Identities = 16/45 (35%), Positives = 30/45 (66%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
+L GLN+++ KG + G++G G GK++LLS + +G+++V
Sbjct: 79 LLSGLNLSIRKGQLIGVIGGVGSGKSSLLSALTAEMDKLTGQVFV 123
>SB_12613| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 651
Score = 41.5 bits (93), Expect = 5e-04
Identities = 25/87 (28%), Positives = 43/87 (49%), Gaps = 2/87 (2%)
Frame = +3
Query: 360 AKNPNV--ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXX 533
A N N+ IL+ +N TV GS+ ++GASG GK+TL++ ++ R + ++
Sbjct: 201 APNGNIKHILNDVNGTVKPGSLLAIMGASGAGKSTLMN-VLAHRNIADMQVSGTVMVNER 259
Query: 534 XXXXXXXXXXXYMPQEVALFGEFSIRE 614
Y+ QE G+ ++RE
Sbjct: 260 KVGLDINTISAYVQQEDLFIGKLTVRE 286
>SB_7365| Best HMM Match : ABC_membrane (HMM E-Value=0)
Length = 1301
Score = 40.7 bits (91), Expect = 0.001
Identities = 17/41 (41%), Positives = 27/41 (65%)
Frame = +3
Query: 351 YGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
Y ++N +L+GL++TV G L+G SGCGK+T++ I
Sbjct: 660 YYPSRNEVKVLNGLSLTVRSGQTVALVGESGCGKSTVIKLI 700
>SB_22546| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 844
Score = 39.9 bits (89), Expect = 0.002
Identities = 31/98 (31%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +3
Query: 324 VCVRRAHKRYGTAKNPNV-ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSG 500
V VR +Y T PNV +L GL++ V +G L+G SGCGK+T +S + G
Sbjct: 667 VQVRSVRFKYPT--RPNVKVLRGLSLEVNQGQTLALVGPSGCGKSTTVSLLERFYDPEDG 724
Query: 501 EIWVLXXXXXXXXXXXXXXXXXYMPQEVALFGEFSIRE 614
E+ + + QE LFG +SI +
Sbjct: 725 EMAIDNANVRQLNLKWLRSKIGIVSQEPVLFG-YSIAQ 761
Score = 38.3 bits (85), Expect = 0.005
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Frame = +3
Query: 369 PNV-ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
P+V +L GL++T+ G L+G SGCGK+TL+ +
Sbjct: 130 PDVKVLKGLHLTIRSGQTVALVGESGCGKSTLIKLV 165
>SB_25408| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1636
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/56 (35%), Positives = 32/56 (57%)
Frame = +3
Query: 312 RQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
R A V + K+ + V +DG+++ + +G I LLG +G GKTTL+S + G
Sbjct: 302 RLHAGVVINSLKKVFSENGKKVAVDGVSLNMYEGQITALLGHNGAGKTTLMSMLTG 357
Score = 37.1 bits (82), Expect = 0.011
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSG 500
+D L++ V G +GLLG +G GKTT + G + SG
Sbjct: 1271 VDHLSLGVPMGECFGLLGINGAGKTTTFRMLTGDETMTSG 1310
>SB_37973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 3369
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/97 (25%), Positives = 40/97 (41%)
Frame = +3
Query: 324 VCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGE 503
V ++ K + + V +D L++ + KG I LLG +G GKTT +S + G SG
Sbjct: 198 VQIKDLRKVFKGSTGSKVAVDNLSLNMYKGQITALLGHNGAGKTTTMSILTGLFTPTSGS 257
Query: 504 IWVLXXXXXXXXXXXXXXXXXYMPQEVALFGEFSIRE 614
++ PQ LF ++ E
Sbjct: 258 A-MIDNKSILTDIDGIRESLGLCPQHNVLFDRLTVEE 293
Score = 38.7 bits (86), Expect = 0.004
Identities = 20/67 (29%), Positives = 37/67 (55%)
Frame = +3
Query: 312 RQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXL 491
++++V V+ K Y + V D L + + +G +GLLG +G GKTT S + G + +
Sbjct: 1248 KKESVIVKDLTKVYHGSDRTAV--DHLCIGIPRGECFGLLGVNGAGKTTTFSMLTGDQSI 1305
Query: 492 NSGEIWV 512
+ G ++
Sbjct: 1306 SEGTAYL 1312
>SB_27093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 683
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/46 (41%), Positives = 27/46 (58%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVL 515
+L G N+ +A G YGL+G +G GKTTLL + R + I +L
Sbjct: 221 LLKGANLAIAFGRRYGLVGRNGIGKTTLLRTLSKRELFVASNISIL 266
>SB_40840| Best HMM Match : ABC-3 (HMM E-Value=2.4)
Length = 235
Score = 38.7 bits (86), Expect = 0.004
Identities = 16/41 (39%), Positives = 26/41 (63%)
Frame = +3
Query: 390 LNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
+N+ V GS+ ++G GCGK+TLLS ++G G ++V
Sbjct: 194 INLDVPAGSLVAVVGQVGCGKSTLLSALLGETERLDGMVYV 234
>SB_39005| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/62 (33%), Positives = 34/62 (54%)
Frame = +3
Query: 321 AVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSG 500
A+ +R+ K YG N L G+++ VA+G Y LLG +G GK+T + + +SG
Sbjct: 108 ALSIRQLTKTYG---NGFQALHGIDLDVAEGDFYALLGPNGAGKSTTIGILSTLVTKSSG 164
Query: 501 EI 506
+
Sbjct: 165 TV 166
>SB_33973| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1184
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/48 (37%), Positives = 30/48 (62%)
Frame = +3
Query: 366 NPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIW 509
N NV+++ + + + +GS+ + G G GKT+LL I G L SGE++
Sbjct: 424 NNNVLINDITVQLPEGSLTAVTGPVGSGKTSLLLTISGELPLASGELY 471
>SB_29759| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1308
Score = 38.3 bits (85), Expect = 0.005
Identities = 17/39 (43%), Positives = 26/39 (66%)
Frame = +3
Query: 390 LNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
+N++V + I ++GA G GKTTLLS I+G+ G+I
Sbjct: 430 VNLSVEENDIVAVIGAVGSGKTTLLSAILGQVSCTKGKI 468
Score = 28.3 bits (60), Expect = 5.2
Identities = 13/45 (28%), Positives = 26/45 (57%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
+L +N + G+ G +G GKT+++SC++ R +G+I +
Sbjct: 1063 VLKEVNFRIGCHEKVGIAGRTGAGKTSIVSCLL-RMPEATGDIMI 1106
>SB_44672| Best HMM Match : ABC_tran (HMM E-Value=4.2039e-44)
Length = 945
Score = 37.5 bits (83), Expect = 0.009
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 363 KNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
K+ +DGLN+ + +G I LG +G GKTT +S + G
Sbjct: 512 KSGTKAVDGLNLNLYEGQIMSFLGHNGAGKTTTMSILTG 550
>SB_58013| Best HMM Match : ABC_membrane (HMM E-Value=6.3e-28)
Length = 951
Score = 37.1 bits (82), Expect = 0.011
Identities = 14/41 (34%), Positives = 26/41 (63%)
Frame = +3
Query: 390 LNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
+++ V KGS+ G+ G+ G GK++LL CI+ + G + +
Sbjct: 108 IDLEVKKGSLIGICGSVGSGKSSLLQCILSQMRKTKGRVGI 148
>SB_7501| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 625
Score = 36.3 bits (80), Expect = 0.020
Identities = 15/42 (35%), Positives = 26/42 (61%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
LD ++ + KG + ++GA G GK++LL ++G L G+I
Sbjct: 397 LDNISFEIGKGDLLVVVGAVGSGKSSLLMAVLGELPLTRGDI 438
>SB_38838| Best HMM Match : ABC_tran (HMM E-Value=0.24)
Length = 169
Score = 35.9 bits (79), Expect = 0.026
Identities = 24/82 (29%), Positives = 33/82 (40%)
Frame = +3
Query: 348 RYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXX 527
RYG + P + D + +A G GL+G SG GKTT + I +N G I +
Sbjct: 74 RYGRHEAP--LYDRFSARIAPGERVGLVGHSGSGKTTFIKLIQRLYDVNGGRIAIDGQDI 131
Query: 528 XXXXXXXXXXXXXYMPQEVALF 593
+ QE LF
Sbjct: 132 AQVRQASLRSQIAIVQQEPVLF 153
>SB_37511| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 884
Score = 35.1 bits (77), Expect = 0.046
Identities = 15/40 (37%), Positives = 25/40 (62%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSG 500
+ G++M + +G I LLG +G GK+TL+ + G +SG
Sbjct: 512 MHGISMDIYEGQITALLGHNGAGKSTLIGALTGMIQPSSG 551
>SB_37300| Best HMM Match : MMR_HSR1 (HMM E-Value=0.061)
Length = 152
Score = 35.1 bits (77), Expect = 0.046
Identities = 19/71 (26%), Positives = 32/71 (45%)
Frame = +3
Query: 402 VAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXXXXXYMPQE 581
V G + ++GASG GKTTL++ ++ R + S + + Y+ QE
Sbjct: 45 VNPGELVAVMGASGSGKTTLIN-VLAHRNIGSMHVSGVVKANNKTLGLAINSISAYIQQE 103
Query: 582 VALFGEFSIRE 614
G ++RE
Sbjct: 104 DLFIGTLTVRE 114
>SB_40697| Best HMM Match : ABC_tran (HMM E-Value=7.1e-07)
Length = 659
Score = 34.3 bits (75), Expect = 0.080
Identities = 28/102 (27%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Frame = +3
Query: 198 MEDVREIDRPITISTIX---XELIXRRNRMFKTQK--STVASRR--QQAVCVR-RAHKRY 353
++D +EI +P T + + L R F K +T+ + ++A +R +++ R
Sbjct: 340 LDDAKEIAQPSTFTALRRSGSRLSGRGMIFFGRDKGGTTIKTPNVPKKAALIRVKSNPRQ 399
Query: 354 GTAKNPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVG 479
K+ N++ D ++M V+ S+ ++G G GK+TLL I G
Sbjct: 400 ENDKSVNILHD-ISMEVSDDSLVAVIGPVGSGKSTLLETISG 440
>SB_13936| Best HMM Match : ABC_tran (HMM E-Value=4.6e-14)
Length = 441
Score = 34.3 bits (75), Expect = 0.080
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXL 491
+L + + G YGL+G +GCGK+T+L+ I G+R +
Sbjct: 70 LLTDAKLELNTGRKYGLIGLNGCGKSTMLTAI-GKREI 106
>SB_56043| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 626
Score = 34.3 bits (75), Expect = 0.080
Identities = 19/72 (26%), Positives = 30/72 (41%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXX 557
ILDGL+ ++ G ++G SG GK+T++ + G + V
Sbjct: 426 ILDGLSFSIPAGKKVAIVGGSGSGKSTIVRLLFRFFDPQGGRVLVAGQDIRDFSLESLRK 485
Query: 558 XXXYMPQEVALF 593
+PQE LF
Sbjct: 486 VVGVVPQECVLF 497
>SB_59357| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1716
Score = 33.9 bits (74), Expect = 0.11
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
L L+ G + + G GCGK+TLLS I+G ++SG++
Sbjct: 503 LRSLSCMAFPGELVLVTGPVGCGKSTLLSVILGEIPISSGKV 544
>SB_20094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 33.5 bits (73), Expect = 0.14
Identities = 15/43 (34%), Positives = 25/43 (58%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
+L LNMT+ I ++G SG GKTTL+ ++ + G++
Sbjct: 240 VLKELNMTIPAKKITAIVGTSGSGKTTLMKLLLKFYEPSEGDV 282
>SB_8891| Best HMM Match : Zot (HMM E-Value=2.5)
Length = 392
Score = 33.1 bits (72), Expect = 0.18
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 1/88 (1%)
Frame = +3
Query: 129 VILYSHI*LDKMPAYDNEGATISMEDVREIDRPITISTIXX-ELIXRRNRMFKTQKSTVA 305
V+ Y+ D N GA +S E ++E + + + + R +
Sbjct: 235 VVFYTPCKADMKAILHNYGAELSEERMKEYMKALKTKKFSNLGEVEKDGRQGRDVTHDDV 294
Query: 306 SRRQQAVCVRRAHKRYGTAKNPNVILDG 389
+R A VR+ KRYGTA+ P+ I G
Sbjct: 295 KQRMSAEEVRKYEKRYGTARQPDYISPG 322
Score = 27.5 bits (58), Expect = 9.1
Identities = 13/27 (48%), Positives = 17/27 (62%)
Frame = +3
Query: 309 RRQQAVCVRRAHKRYGTAKNPNVILDG 389
+R A VR+ KRYGTA+ P+ I G
Sbjct: 67 QRMSAEEVRKYEKRYGTARLPDYISPG 93
>SB_24754| Best HMM Match : ABC_tran (HMM E-Value=1.3e-36)
Length = 781
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/81 (23%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNS--GEIWVLXXXXXXXXXXXX 551
+L G+ + G + ++G SG GKTT L+ + G+ + GEI++
Sbjct: 212 VLMGVTGKIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGTRGGEIFI--NGKKEDDLDMY 269
Query: 552 XXXXXYMPQEVALFGEFSIRE 614
++PQE + +++E
Sbjct: 270 RTITGFVPQEDVMHRNLTVKE 290
>SB_58705| Best HMM Match : ABC_tran (HMM E-Value=5.7e-05)
Length = 284
Score = 32.7 bits (71), Expect = 0.24
Identities = 24/100 (24%), Positives = 44/100 (44%), Gaps = 2/100 (2%)
Frame = +3
Query: 321 AVCVRRAHKRYGTAKNPNV--ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLN 494
++C R R A P + +L ++ G++ ++GASG GK+TL++ ++ R L
Sbjct: 112 SICKRLCGSR-DDAPAPQIRQVLFDVSGRAEPGTLLAVMGASGAGKSTLMN-VLAYRNLG 169
Query: 495 SGEIWVLXXXXXXXXXXXXXXXXXYMPQEVALFGEFSIRE 614
S ++ Y+ QE G ++RE
Sbjct: 170 SIQVTGEVKVNNNNLGLAINSISAYIQQEDLFIGTLTVRE 209
>SB_33165| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1310
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
L G++ G + + G G GK+TLL I G LN+G I
Sbjct: 475 LQGVSFAAGAGDLVIITGPVGSGKSTLLMTIQGELPLNAGSI 516
>SB_53189| Best HMM Match : ABC_tran (HMM E-Value=0.021)
Length = 127
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXX 557
+L G+ + G + ++G SG GKTT L+ + G+ + +
Sbjct: 6 VLAGVTGKINSGEVTAVMGPSGAGKTTFLNTLSGKAYYGNRGGDIFINGVKESDFDKYRT 65
Query: 558 XXXYMPQEVALFGEFSIRE 614
++PQE + +++E
Sbjct: 66 ITGFVPQEDVMHRNLTVKE 84
>SB_26620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 433
Score = 32.3 bits (70), Expect = 0.32
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVLXXXXXXXXXXXXXX 557
+L G+ + G + ++G SG GKTT L+ + G+ + +
Sbjct: 330 VLMGVTGKIKSGEVTAVMGPSGAGKTTFLNTLSGKAYYGNRGGDIFINGVKESDFDKYRT 389
Query: 558 XXXYMPQEVALFGEFSIRE 614
++PQE + +++E
Sbjct: 390 ITGFVPQEDVMHRNLTVKE 408
>SB_40345| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1250
Score = 31.9 bits (69), Expect = 0.42
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +3
Query: 381 LDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
L + + + + + G GCGKT+LLS I+G + G++ V
Sbjct: 431 LSHVTLELRNSDLVLVTGPVGCGKTSLLSAILGELSVRKGDLSV 474
>SB_20224| Best HMM Match : ABC_tran (HMM E-Value=2.2e-36)
Length = 380
Score = 31.9 bits (69), Expect = 0.42
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 366 NPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIW 509
+P L L+ + +G + + G G GK+TLL I+ + G+IW
Sbjct: 159 SPKSSLSRLSFRINQGGLLAVTGPIGSGKSTLLLTILHELPKHRGQIW 206
>SB_58724| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 228
Score = 31.5 bits (68), Expect = 0.56
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGR 482
+L + + G + ++G SG GKTTLL+ + G+
Sbjct: 153 VLQSVTGEIRAGEVTAIMGPSGAGKTTLLNTLSGK 187
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 31.1 bits (67), Expect = 0.74
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +3
Query: 411 GSIYGLLGASGCGKTTLLSCIVGRRXLNSG 500
G + GL+G +G GK+T L + G++ N G
Sbjct: 111 GEVLGLVGTNGIGKSTALKILAGKQKPNLG 140
>SB_30376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1758
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/39 (38%), Positives = 23/39 (58%)
Frame = +3
Query: 390 LNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
L++ A+G + G +GCGKT+LL I G SG++
Sbjct: 1565 LDLVFARGQNVLITGMAGCGKTSLLRVIRGLWEPLSGDV 1603
>SB_39746| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 639
Score = 29.9 bits (64), Expect = 1.7
Identities = 13/45 (28%), Positives = 24/45 (53%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWV 512
+LD ++ V G + L+G SG GK+T ++ + GE+ +
Sbjct: 369 VLDNVSFMVEPGQVVALVGPSGGGKSTCINLLEHLYEPTGGEVLI 413
>SB_27355| Best HMM Match : ABC_tran (HMM E-Value=1.1e-37)
Length = 226
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +3
Query: 417 IYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
I GL+G +G GKTTLL + G SG I
Sbjct: 3 IIGLVGENGNGKTTLLRSLCGELNPTSGTI 32
>SB_8906| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1116
Score = 29.5 bits (63), Expect = 2.3
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
IL +N+ ++ + ++G G GK+TLLS I G G+I
Sbjct: 337 ILGKINLDLSGNRLALVIGPVGSGKSTLLSAICGASSSYKGKI 379
>SB_34997| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 845
Score = 29.1 bits (62), Expect = 3.0
Identities = 15/47 (31%), Positives = 21/47 (44%)
Frame = +3
Query: 366 NPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
N L LNM + + G G GK+TLL ++G + G I
Sbjct: 487 NQETALQNLNMRANAKELTLINGPGGSGKSTLLLAVLGELPVTEGSI 533
>SB_48764| Best HMM Match : RhoGAP (HMM E-Value=0)
Length = 583
Score = 29.1 bits (62), Expect = 3.0
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = -2
Query: 493 FSXRLPTIHDSSVVLPQPEAPKRPYIDPLATVIFRPSKI 377
+ R +++D+ + PEAP Y P+ T +RP I
Sbjct: 474 YDNRPASVYDNEPTIKAPEAPLYRYSSPVFTTNYRPDAI 512
>SB_46433| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/42 (30%), Positives = 22/42 (52%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGE 503
+L + + + + G+ G G GK++LL I+ L SGE
Sbjct: 263 VLSDITLKLKGSRLIGITGPCGSGKSSLLLAILNEMSLISGE 304
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +3
Query: 375 VILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
V L ++++ + + GA GCGKT+LL I+ + G +
Sbjct: 415 VTLSDVSLSAHSSQLVMVTGAVGCGKTSLLMAILREIPIKHGSV 458
>SB_24381| Best HMM Match : MMR_HSR1 (HMM E-Value=2)
Length = 110
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/37 (37%), Positives = 24/37 (64%)
Frame = +3
Query: 372 NVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGR 482
+ I+D +++ V G+ ++G SG GK+TLL VG+
Sbjct: 23 DAIVD-VSLGVNPGTFAAVMGPSGSGKSTLLGLAVGK 58
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 28.3 bits (60), Expect = 5.2
Identities = 22/74 (29%), Positives = 30/74 (40%)
Frame = +3
Query: 273 RMFKTQKSTVASRRQQAVCVRRAHKRYGTAKNPNVILDGLNMTVAKGSIYGLLGASGCGK 452
RM K + + Q +R A P DG N ++ +LGA+G GK
Sbjct: 278 RMPKGSLAPLGPEEQYKPVDTLTRRRASLAPKPKDPKDGNNNKPSEKYSMVVLGAAGVGK 337
Query: 453 TTLLSCIVGRRXLN 494
T L+ V R LN
Sbjct: 338 TALVVRFVTGRFLN 351
>SB_4521| Best HMM Match : TPR_2 (HMM E-Value=1.7e-13)
Length = 829
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/33 (48%), Positives = 18/33 (54%), Gaps = 2/33 (6%)
Frame = +3
Query: 381 LDGLNMTVAKGSI--YGLLGASGCGKTTLLSCI 473
LDGLN + I L GASG GKTTL +
Sbjct: 104 LDGLNKLLGNRFIKAVNLFGASGVGKTTLAQVV 136
>SB_11108| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1266
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = +3
Query: 366 NPNVILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEI 506
N ++ L ++++ + + G+ GCGKT+LL I+ + G +
Sbjct: 442 NGSLALRNVSLSATHDKLVMVTGSVGCGKTSLLMAILKEIPIKHGSV 488
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
+LDG+++ V G++G +G GK++L++ +
Sbjct: 1041 VLDGVSLEVLPKEKVGIVGRTGAGKSSLVAAL 1072
>SB_216| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1315
Score = 28.3 bits (60), Expect = 5.2
Identities = 10/32 (31%), Positives = 22/32 (68%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCI 473
+L+G+N+ V G++G +G GK++L++ +
Sbjct: 1091 VLEGVNLEVDPKEKIGIVGRTGAGKSSLVAAL 1122
>SB_15837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 192 SWLLHCRKLAFCLVKYGYTRSQSTL 118
SWL C KLA +++ GY+R+ S L
Sbjct: 10 SWLFPCWKLAIHVLEAGYSRAGSWL 34
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 192 SWLLHCRKLAFCLVKYGYTRSQSTL 118
SWL C KLA +++ GY+R+ S L
Sbjct: 126 SWLFTCWKLAIPVLEAGYSRAGSWL 150
>SB_1653| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1702
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/46 (39%), Positives = 25/46 (54%)
Frame = +3
Query: 378 ILDGLNMTVAKGSIYGLLGASGCGKTTLLSCIVGRRXLNSGEIWVL 515
IL + + V+ + ++G G GK+TLLS I G L SG I L
Sbjct: 797 ILQDIELDVSGSCLVVVVGPVGSGKSTLLSTICG---LESGFIGFL 839
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,621,073
Number of Sequences: 59808
Number of extensions: 383002
Number of successful extensions: 1053
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1053
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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