Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_L06
         (614 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          22   4.1  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   7.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        21   7.2  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        21   7.2  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        21   7.2  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    21   9.6  

>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 9/27 (33%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
 Frame = -3

Query: 513 APRSHQNL-VFVCRLYTTAVWSCRSQK 436
           A +S + + ++VCR+  T VW   +Q+
Sbjct: 73  ADKSEKRIPLYVCRVLHTTVWVAGAQR 99


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 12/39 (30%), Positives = 18/39 (46%)
 Frame = -1

Query: 461 QCGLAAARSTQKAIYRSFSNSHIQTIQNNVRVFSCSISF 345
           QC L      QK +Y+S   SH +  ++  R   C  +F
Sbjct: 63  QCLLCQKAFDQKNLYQSHLRSHGKEGEDPYRCNICGKTF 101


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 218 DFPDVLHGYRGS 183
           D+PD+  GY G+
Sbjct: 229 DYPDIYSGYEGA 240


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 218 DFPDVLHGYRGS 183
           D+PD+  GY G+
Sbjct: 229 DYPDIYSGYEGA 240


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 218 DFPDVLHGYRGS 183
           D+PD+  GY G+
Sbjct: 229 DYPDIYSGYEGA 240


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 21.0 bits (42), Expect = 9.6
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 430 WVLLAAARPHCCRV*SAD 483
           W L A   PH CR  + D
Sbjct: 14  WELNATNSPHTCRTKNGD 31


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,768
Number of Sequences: 438
Number of extensions: 3363
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)