Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K21
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
12_02_0593 + 20874459-20874575,20875258-20875427,20875597-208756... 99 3e-21
12_01_0933 - 9263023-9263146,9263224-9263416,9263495-9263634,926... 98 5e-21
09_01_0138 - 2070357-2070722 34 0.11
09_01_0164 + 2424158-2424164,2424165-2424536,2428623-2428807,242... 31 0.80
07_03_1424 - 26474464-26474514,26474549-26474635,26474905-264750... 29 3.2
12_01_0015 - 111666-111747,112043-112368,112500-112635,112772-11... 28 7.5
11_01_0015 - 115965-116076,116432-116757,116889-117024,117161-11... 28 7.5
09_01_0169 - 2452623-2452754,2454585-2454761 27 9.9
01_07_0370 - 43119049-43120278,43121376-43121420,43121421-431216... 27 9.9
>12_02_0593 +
20874459-20874575,20875258-20875427,20875597-20875672,
20875764-20875894,20876570-20876692,20876780-20876893,
20877163-20877239,20877405-20877472,20877740-20877861,
20878041-20878180,20878411-20878603,20878692-20878827
Length = 488
Score = 99.1 bits (236), Expect = 3e-21
Identities = 43/80 (53%), Positives = 58/80 (72%)
Frame = +2
Query: 410 RDGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGP 589
RDG V+VVY+R+GY P YP+ EW ARL +E+S+A+KCPSI Y L GTKK+QQ LA P
Sbjct: 269 RDGKTVSVVYFRAGYTPNDYPSEAEWAARLLLEQSSAVKCPSISYHLVGTKKIQQELARP 328
Query: 590 GVLEKFMGSGTSTSRVRDIF 649
VLE+F+ + +++R F
Sbjct: 329 NVLERFLENKEEITKIRKCF 348
>12_01_0933 -
9263023-9263146,9263224-9263416,9263495-9263634,
9263760-9263881,9263970-9264039,9264463-9264498,
9264567-9264692,9265294-9265424,9265549-9265645,
9265858-9266027,9267817-9267874,9268758-9269074
Length = 527
Score = 98.3 bits (234), Expect = 5e-21
Identities = 45/81 (55%), Positives = 57/81 (70%)
Frame = +2
Query: 407 DRDGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAG 586
+RDG PVAVVY+R+GY P YP+ EW ARL +E S+AIKCPSI + L GTKK+QQ LA
Sbjct: 311 ERDGLPVAVVYFRAGYTPNDYPSEAEWRARLLIECSSAIKCPSIAHHLVGTKKIQQELAK 370
Query: 587 PGVLEKFMGSGTSTSRVRDIF 649
VLE+F+ + +VR F
Sbjct: 371 ENVLERFLDNKADIEKVRKCF 391
>09_01_0138 - 2070357-2070722
Length = 121
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/52 (38%), Positives = 22/52 (42%)
Frame = +1
Query: 487 GCEITRRKIHGHKMSIDPLPTGGNEEGPTSPGRSRGAGEVHGLRDEHLSRPG 642
G E RR HKMS + + G E PGR G GEV R PG
Sbjct: 5 GTEEWRRNTDTHKMSAEEVRAAGVEASMRPPGRGHGPGEVLHQRGRMPYGPG 56
>09_01_0164 +
2424158-2424164,2424165-2424536,2428623-2428807,
2429045-2429200
Length = 239
Score = 31.1 bits (67), Expect = 0.80
Identities = 16/36 (44%), Positives = 18/36 (50%)
Frame = +2
Query: 407 DRDGHPVAVVYYRSGYEPAQYPTAREWDARLRVERS 514
D DGHP +VY SGY AQ RLR R+
Sbjct: 82 DDDGHPQDMVYDSSGYIDAQATRQARLRCRLRTNRT 117
>07_03_1424 -
26474464-26474514,26474549-26474635,26474905-26475006,
26475149-26475260,26475405-26475463,26475559-26475633,
26475734-26475832,26476128-26476343,26476426-26476500,
26476583-26476670,26476757-26476902,26477240-26477347,
26477417-26478436,26478437-26478715,26479471-26480520,
26480636-26480692,26480780-26480837,26481379-26481458,
26481598-26481654,26481764-26481833,26481967-26482202,
26482341-26482445,26482534-26482680,26482758-26482823,
26482916-26482979,26484040-26484200,26484308-26484400,
26484487-26484600,26484684-26484803,26484893-26484976,
26485061-26485216,26485389-26485811
Length = 1885
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +2
Query: 548 LAGTKKVQQALAGPGVLEKFMGSGTSTSRVRDI 646
LAGT + AG GV ++ GTS+ RV D+
Sbjct: 79 LAGTPRAAACAAGSGVRDRTSSIGTSSRRVFDL 111
>12_01_0015 -
111666-111747,112043-112368,112500-112635,112772-112955,
113067-113135,113703-113829,115810-116051,116125-116279,
116751-116822,116908-116976,117058-117129,117217-117349,
117439-117944,118033-118567,118753-118819
Length = 924
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 436 NDCYGMTVPVNDMSLVYVRSLFEYLNFSNSNEYLK 332
N Y T+ V + + VR+ F Y NF NSN Y K
Sbjct: 78 NRKYCYTMNVRNRTRYLVRATFLYGNFDNSNVYPK 112
>11_01_0015 -
115965-116076,116432-116757,116889-117024,117161-117344,
117455-117523,118091-118217,120028-120269,120343-120497,
120969-121040,121126-121194,121276-121347,121435-121567,
121661-122166,122255-122789,122943-123018
Length = 937
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = -3
Query: 436 NDCYGMTVPVNDMSLVYVRSLFEYLNFSNSNEYLK 332
N Y T+ V + + VR+ F Y NF NSN Y K
Sbjct: 81 NRKYCYTMNVRNRTRYLVRATFLYGNFDNSNVYPK 115
>09_01_0169 - 2452623-2452754,2454585-2454761
Length = 102
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +1
Query: 277 TSLRPEKNWQETQRACLFFLNIHSNLKNSNIQIRNERIQVTC 402
T+LR Q FFL + S++K++N+Q + R V C
Sbjct: 28 TALREFAGGQSQMSHLSFFLRVWSHIKSNNLQDPSNRNIVNC 69
>01_07_0370 -
43119049-43120278,43121376-43121420,43121421-43121662,
43121908-43122686,43123123-43123463,43123565-43123785,
43123866-43124176,43124257-43124516,43124836-43124918,
43124940-43125036,43125132-43125305,43126215-43126592
Length = 1386
Score = 27.5 bits (58), Expect = 9.9
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = -3
Query: 439 VNDCYGMTVPVNDMSLVYVRSLFEYLN 359
+ D YG V + +++Y+R+L+ + N
Sbjct: 231 IQDAYGEAASVAEQAILYIRTLYSFTN 257
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,912,502
Number of Sequences: 37544
Number of extensions: 367792
Number of successful extensions: 1072
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1072
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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