Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_K21
         (654 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z78412-1|CAB01655.1|  490|Caenorhabditis elegans Hypothetical pr...    89   3e-18
AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical ...    32   0.31 
Z70268-1|CAA94217.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.8  
Z19152-9|CAC35809.1|  364|Caenorhabditis elegans Hypothetical pr...    28   5.0  

>Z78412-1|CAB01655.1|  490|Caenorhabditis elegans Hypothetical
           protein M176.2 protein.
          Length = 490

 Score = 89.0 bits (211), Expect = 3e-18
 Identities = 41/79 (51%), Positives = 53/79 (67%)
 Frame = +2

Query: 413 DGHPVAVVYYRSGYEPAQYPTAREWDARLRVERSTAIKCPSIHYQLAGTKKVQQALAGPG 592
           DG  VA+VY+R+GY P  YP+ +EW+AR R+E STAIK P I  Q+A TKK QQ L+  G
Sbjct: 271 DGRQVAIVYFRAGYSPDHYPSTKEWEARERMELSTAIKTPWIGLQVANTKKTQQVLSEDG 330

Query: 593 VLEKFMGSGTSTSRVRDIF 649
           VLE+F+G       +R  F
Sbjct: 331 VLERFIGKPREARDIRASF 349


>AL032648-8|CAI46618.1|  365|Caenorhabditis elegans Hypothetical
           protein Y54G9A.10 protein.
          Length = 365

 Score = 32.3 bits (70), Expect = 0.31
 Identities = 16/49 (32%), Positives = 26/49 (53%)
 Frame = -1

Query: 267 LAVFLFDVQQVCTFIYVEFFFLI*FDFTYKALLTECRHLLSIFVLFYRK 121
           +AV +  V Q+   +    FFL  F F Y  L+T   +L++I +L Y +
Sbjct: 174 IAVAIVLVDQMFNLVVAYLFFLFYFSFFYMILITAAPNLVAITLLLYSR 222


>Z70268-1|CAA94217.1|  390|Caenorhabditis elegans Hypothetical
           protein T21E8.4 protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 16/68 (23%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
 Frame = +1

Query: 163 FCKQCFIREI--KSNQKKKFDINESTYLLNVKKKYRQFTKTSLRPEKNWQETQRACLFFL 336
           F K CF R +  +  Q+K + + ++     +K   +  ++ + + +++WQ     C   +
Sbjct: 4   FGKLCFSRPLGYEEKQEKLYRVEKTKAEKKMKILDKLLSRQAAKNQRHWQFEVFGCHEMI 63

Query: 337 NIHSNLKN 360
            I+SN KN
Sbjct: 64  GIYSNPKN 71


>Z19152-9|CAC35809.1|  364|Caenorhabditis elegans Hypothetical
           protein B0464.9 protein.
          Length = 364

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/43 (32%), Positives = 23/43 (53%)
 Frame = +3

Query: 453 TSRLSTPPQGNGMRDYASKDPRP*NVHRSTTNWRERRRSNKPW 581
           TS ++TP + N +   A    RP  V  ++T+ ++R  S  PW
Sbjct: 16  TSHVTTPHRQNDLLRQAVTHGRPPPVPSTSTSGKKREMSELPW 58


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,559,738
Number of Sequences: 27780
Number of extensions: 315081
Number of successful extensions: 929
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 929
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)