BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K17
(654 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0827 - 25122413-25122430,25122970-25123063,25124210-25124535 32 0.46
04_03_1049 + 22015053-22015083,22015770-22015885,22016013-220161... 31 0.61
11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861 31 0.80
11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754 30 1.4
04_04_1668 + 35217254-35218531 30 1.4
01_06_0776 + 31912953-31914086,31914195-31915073,31915160-31915198 29 2.4
10_08_0425 - 17806117-17806401,17806862-17806984,17807076-178072... 29 3.2
01_04_0051 + 15430980-15431591 29 3.2
01_01_0601 - 4476261-4476728 29 4.3
08_01_0841 + 8223768-8223871,8227749-8228745,8228779-8228828,822... 28 5.6
07_01_1097 - 10068431-10068655,10068797-10068880,10068945-100692... 28 5.6
05_07_0125 + 27861368-27862282 28 5.6
02_05_1127 + 34292894-34293284,34293948-34295443 28 5.6
02_03_0235 - 16702768-16702956,16703956-16704492,16705084-167052... 28 5.6
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 28 5.6
11_06_0238 - 21614535-21615347,21616759-21617352 28 7.5
10_08_0614 - 19238064-19238132,19238381-19238407,19238436-192385... 28 7.5
04_03_0153 + 11919769-11919880,11920190-11920488,11921909-119220... 28 7.5
03_04_0185 - 18213830-18214552 28 7.5
02_04_0554 - 23831212-23832163,23833173-23833438,23833694-238337... 28 7.5
12_02_0118 - 13869237-13869307,13869375-13869465,13870321-138704... 27 9.9
11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160 27 9.9
11_04_0221 + 15021145-15022497 27 9.9
09_03_0179 - 13131404-13131514,13131834-13131920,13132316-131324... 27 9.9
05_01_0521 + 4500268-4500283,4500364-4500680,4500999-4501094,450... 27 9.9
03_01_0320 - 2510907-2512190 27 9.9
01_03_0202 - 13762042-13762572 27 9.9
>06_03_0827 - 25122413-25122430,25122970-25123063,25124210-25124535
Length = 145
Score = 31.9 bits (69), Expect = 0.46
Identities = 24/64 (37%), Positives = 26/64 (40%), Gaps = 1/64 (1%)
Frame = +3
Query: 360 RRS*VRSGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQP-GRR*IRANTQGAGEPHQHG 536
RR V C E P G R G R R A G+ GRR RA + AG P G
Sbjct: 35 RRLAVSPRCREVASPGGEGARRGGVGVGRGGERAASGGEEQGRRRRRAGNEVAGRPEGRG 94
Query: 537 G*SR 548
G R
Sbjct: 95 GAGR 98
>04_03_1049 +
22015053-22015083,22015770-22015885,22016013-22016108,
22016229-22016285,22016468-22016620,22016754-22016838,
22017097-22017187,22017324-22017488,22017813-22017932,
22018020-22018104,22018234-22018402,22019055-22019173,
22019250-22019440,22019746-22019957,22020905-22021500,
22022538-22022658,22023439-22023868,22024412-22024797,
22024976-22025071,22025380-22025432,22026915-22027061,
22027139-22027309,22027880-22027962,22028049-22028247,
22028668-22028789,22029752-22029818,22029960-22030010,
22030768-22031001,22031263-22031451,22032455-22032646,
22032742-22032936
Length = 1673
Score = 31.5 bits (68), Expect = 0.61
Identities = 25/87 (28%), Positives = 33/87 (37%), Gaps = 8/87 (9%)
Frame = +3
Query: 384 CPEPTYPTAGGGPREVRGASRDRHRQAV--------RGQPGRR*IRANTQGAGEPHQHGG 539
CP+ GG R G R R+ V R +P R + AN + +Q G
Sbjct: 560 CPDLGDSVGGGAERRRTGGVERRRREPVTRRRGGKERRRPSWRALAANRRRGEAANQRRG 619
Query: 540 *SRCHLGGSTVTGEAHRRGVGQEIRRG 620
+ GGS G RRG + R G
Sbjct: 620 EAATQRGGSDPAGGLRRRGEAAKRRHG 646
>11_06_0744 - 26850761-26850771,26850794-26850861,26851464-26851861
Length = 158
Score = 31.1 bits (67), Expect = 0.80
Identities = 26/75 (34%), Positives = 32/75 (42%), Gaps = 2/75 (2%)
Frame = +3
Query: 402 PTAGGGPREVRGASRDRH-RQAVRGQPGRR*IRANTQ-GAGEPHQHGG*SRCHLGGSTVT 575
P AG R RG R R+ + GRR + GAG+ + G R G
Sbjct: 2 PVAGRRRRRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEE 61
Query: 576 GEAHRRGVGQEIRRG 620
EA RR G+E RRG
Sbjct: 62 EEAGRRKAGEEARRG 76
Score = 27.9 bits (59), Expect = 7.5
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 3/72 (4%)
Frame = +3
Query: 411 GGGPREVR--GASRDRHRQAVRGQPGRR*IRANTQ-GAGEPHQHGG*SRCHLGGSTVTGE 581
G G R+ R G R R+ + GRR + GAG+ + G R G E
Sbjct: 40 GAGKRKRRRGGGRRAAGRRKEEEEAGRRKAGEEARRGAGKRKRRRGGGRRAAGRRKEEEE 99
Query: 582 AHRRGVGQEIRR 617
A RR G+E RR
Sbjct: 100 AGRRKAGEETRR 111
>11_06_0017 - 19288171-19288437,19288770-19288989,19291630-19291754
Length = 203
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/57 (29%), Positives = 32/57 (56%)
Frame = +1
Query: 457 AKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
A L EA A+ + R+ LE + +E++R EAQ+ +A ++ ++Y+E+ R
Sbjct: 106 AALVEAQHKAERERKEREELEKK--LEEERKKAEEAQMKEAMEQQQKELERYQELER 160
>04_04_1668 + 35217254-35218531
Length = 425
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/58 (34%), Positives = 26/58 (44%), Gaps = 1/58 (1%)
Frame = +3
Query: 447 DRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLGGSTVTGE-AHRRGVGQEIRR 617
D+ V GQ R RA T PH HG R GGS+ +G +H R + + R
Sbjct: 188 DKDAGGVVGQRNRSFGRAGTTRDSLPHGHGHHRRSSSGGSSGSGSGSHLRSLSWSVSR 245
>01_06_0776 + 31912953-31914086,31914195-31915073,31915160-31915198
Length = 683
Score = 29.5 bits (63), Expect = 2.4
Identities = 21/70 (30%), Positives = 25/70 (35%), Gaps = 1/70 (1%)
Frame = +3
Query: 378 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQP-GRR*IRANTQGAGEPHQHGG*SRCH 554
SG PEPT A G VRG DR A + G GA + G
Sbjct: 192 SGMPEPTSRAAAGAEAGVRGIMMDRFLPAAQAVAIGSPQYTFRKAGAASATSNSGRELAR 251
Query: 555 LGGSTVTGEA 584
GS +G +
Sbjct: 252 AAGSNASGSS 261
>10_08_0425 -
17806117-17806401,17806862-17806984,17807076-17807222,
17807307-17807450,17808557-17808668,17808762-17808898,
17809016-17809156,17810921-17811004,17811275-17811742,
17811858-17811936,17812494-17812506,17813884-17814460,
17814502-17814774,17814899-17815045,17815354-17815413,
17816124-17816510
Length = 1058
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/43 (39%), Positives = 19/43 (44%)
Frame = -3
Query: 595 PRR*ASPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPR 467
P ASP T PPR Q P + PAP + RP PR
Sbjct: 72 PANPASPATPGPPRPQFAGSPAYASPPAPAFSYNVLPRPS-PR 113
>01_04_0051 + 15430980-15431591
Length = 203
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 411 GGGPREVRGASRDRHRQAVRGQP 479
GG P V+ A RD HR+A+R +P
Sbjct: 93 GGAPAWVQDARRDAHRRALRRRP 115
>01_01_0601 - 4476261-4476728
Length = 155
Score = 28.7 bits (61), Expect = 4.3
Identities = 23/63 (36%), Positives = 27/63 (42%)
Frame = +3
Query: 405 TAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLGGSTVTGEA 584
TAG GP + RG R+AV G GR R + A E + G S GG G
Sbjct: 36 TAGAGPTDHRG-----RRRAVTGDGGRH--RERRRAAREAARGNGGSEGEGGGGAHRGAR 88
Query: 585 HRR 593
RR
Sbjct: 89 RRR 91
>08_01_0841 +
8223768-8223871,8227749-8228745,8228779-8228828,
8228896-8230396
Length = 883
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +1
Query: 19 ISAVTIFL*RPSSVAAILFAGCVRAEPISTIRNSNDERGCQLAFSRVGRRC 171
I ++T+F S+AA++ + +RA I + N+N+ + + RVG C
Sbjct: 535 IRSLTVFNEPSESIAALICSSKLRAVRILDLSNANEFKITRRDIERVGELC 585
>07_01_1097 -
10068431-10068655,10068797-10068880,10068945-10069292,
10069477-10069510,10069617-10070230,10079179-10079553,
10079599-10079853,10079983-10080300
Length = 750
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +1
Query: 130 RGCQLAFSRVGRRCLCLLXFKHSILTQK*IKMTTN 234
R C L FS+ RCL F H+ Q +KM+ N
Sbjct: 123 RACALDFSKDWERCLPYAEFSHNNSFQASLKMSPN 157
>05_07_0125 + 27861368-27862282
Length = 304
Score = 28.3 bits (60), Expect = 5.6
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 3/73 (4%)
Frame = +3
Query: 411 GGGPREVRGASRD---RHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLGGSTVTGE 581
GG R G SR RHR+ R + R R +G G+ ++ GG GG G
Sbjct: 186 GGRSRRSHGRSRSPSPRHRRGNRDRDDFRRERDGYRGGGDGYRGGGGGG---GGDGYRGG 242
Query: 582 AHRRGVGQEIRRG 620
RG G RRG
Sbjct: 243 DSYRGGGGGGRRG 255
>02_05_1127 + 34292894-34293284,34293948-34295443
Length = 628
Score = 28.3 bits (60), Expect = 5.6
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Frame = +3
Query: 387 PEPTYPTAGGGPR----EVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCH 554
P PT PR E R R R+A GQP RR ++ G GG S H
Sbjct: 55 PRPTRRAHPASPRASWAEAARLERRRRRRAT-GQPKRRWPPGSSGGGARGGSSGGDSDGH 113
Query: 555 LGGSTVTGE 581
GG + G+
Sbjct: 114 QGGPSGGGD 122
>02_03_0235 -
16702768-16702956,16703956-16704492,16705084-16705233,
16705310-16705625,16707005-16707286,16707895-16707971,
16708121-16708186,16708700-16709246,16709435-16709565,
16709642-16709746,16709859-16710039,16710123-16710185,
16711000-16711109,16711576-16711638,16711859-16712191
Length = 1049
Score = 28.3 bits (60), Expect = 5.6
Identities = 21/70 (30%), Positives = 25/70 (35%)
Frame = -3
Query: 652 SQXQPWPAYEQPLRISCPTPRR*ASPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGW 473
S+ + W A +Q R+ R S PRW P W P P R P W
Sbjct: 7 SRVESW-ARDQAARLPAWARPRPPSAAAAAVPRWPWPWPWSWSWPPPP-------RAPAW 58
Query: 472 PRTAWRWRSR 443
P R R R
Sbjct: 59 PGDRRRQRER 68
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 28.3 bits (60), Expect = 5.6
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 5/67 (7%)
Frame = -3
Query: 652 SQXQPWPAYEQPLRISCP--TPRR*ASPVTVEPPRWQ---RDHPPCWCGSPAPCVFARIH 488
S Q A++ P+R S P TP + + P D PP +P P +R H
Sbjct: 279 SSSQTGTAHKPPIRGSAPAETPLPQNTNMPAVPKNGSSVSHDRPPSTVAAPKPATSSRYH 338
Query: 487 RRPGWPR 467
R G P+
Sbjct: 339 GRGGAPK 345
>11_06_0238 - 21614535-21615347,21616759-21617352
Length = 468
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -3
Query: 382 PLRTQLLLFA*FPLATVCGTPRTRPYIFPFPLSFDAF 272
P+ Q+L A V G RPYI F ++FD F
Sbjct: 312 PMSEQILFLASLVARRVFGLAGVRPYIPDFKMAFDHF 348
>10_08_0614 -
19238064-19238132,19238381-19238407,19238436-19238510,
19238637-19239317,19239423-19239554,19239676-19239723,
19239828-19239878,19240015-19240134,19241121-19241261,
19241701-19241865,19241981-19242160,19242314-19242445,
19242536-19242643,19242779-19242883,19243217-19243321,
19243407-19243463,19243991-19244010,19244299-19244377,
19245021-19245080,19245562-19245615,19246535-19246600,
19246938-19246990,19247361-19247450,19248152-19248249,
19248348-19248721
Length = 1029
Score = 27.9 bits (59), Expect = 7.5
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 544 RVAILEAQLSQAKLIAEESDKKYEEVARKLAMVXADL 654
R A LEA L++ + + EE KK++E +K + DL
Sbjct: 859 REAALEAALAEKEHLEEEYKKKFDEAKKKELSLENDL 895
>04_03_0153 +
11919769-11919880,11920190-11920488,11921909-11922024,
11922113-11922248,11922959-11923006,11924130-11924228,
11924317-11924385,11924465-11924599,11924687-11924755,
11925221-11925276,11925465-11925624,11926534-11926698,
11927484-11927568,11927646-11927849,11928396-11928487,
11928571-11928613,11930727-11930884,11931520-11931630,
11931947-11932012,11933716-11933784,11934181-11934255,
11934330-11934506,11934598-11934683,11936259-11936313,
11936901-11936939,11938105-11938230,11938319-11938432,
11939208-11939265,11939485-11939623,11939698-11939783,
11939842-11940041
Length = 1148
Score = 27.9 bits (59), Expect = 7.5
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +3
Query: 339 ASGNYAXRRS*VRSGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQP 479
A G RRS RS T P A G P + + DR R A+ QP
Sbjct: 76 ARGILPVRRSSARSSTTALTCPAAAGDPNSL---ANDRKRDAIPKQP 119
>03_04_0185 - 18213830-18214552
Length = 240
Score = 27.9 bits (59), Expect = 7.5
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = +3
Query: 18 NQCGNDIFVASKFGGGHFIRRLCSCR 95
N C +F S G GH IR + SC+
Sbjct: 101 NYCHKILFACSSGGTGHLIRHIKSCK 126
>02_04_0554 -
23831212-23832163,23833173-23833438,23833694-23833748,
23834384-23834436,23834512-23834588,23834730-23834862,
23834958-23835098,23835840-23835960,23836137-23836242,
23836523-23836592,23836716-23836885,23837253-23837277,
23837662-23837777,23838926-23839217
Length = 858
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -3
Query: 541 HPPCWCGSP-APCVFARIHRRPGWPRTAWRWRSRDAPRTSR 422
HPP P AP ++A + R P +P AW+WR A +R
Sbjct: 14 HPPALRARPLAPHLYAALPRAP-YP--AWQWRGARAASPAR 51
>12_02_0118 -
13869237-13869307,13869375-13869465,13870321-13870440,
13870668-13870795,13871159-13871270,13871719-13871817,
13871918-13871992,13872099-13872320,13873177-13874034
Length = 591
Score = 27.5 bits (58), Expect = 9.9
Identities = 17/50 (34%), Positives = 21/50 (42%)
Frame = -3
Query: 523 GSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGPPPAVGYVGSGQPLR 374
G PAP P WP T A +S+ PPP +G G+ P R
Sbjct: 228 GPPAPSQQVPFGGAPQWPGTQPPPFGAQAAPSSQ-PPPFMGVPGNAPPFR 276
>11_06_0453 + 23781803-23781814,23782700-23782781,23783334-23784160
Length = 306
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = -3
Query: 634 PAYEQPLRISCPTPRR*---ASPVTVEPPRWQRDHPPCWCGSPAPC 506
P E+P C P A+P VE P W P C +P PC
Sbjct: 194 PVVEKPRPPPCARPFYPVDMATPTMVEIPSWPAAPAPPSCCAPPPC 239
>11_04_0221 + 15021145-15022497
Length = 450
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = -3
Query: 460 WRWRSRDAPRTSRGPPPAV 404
W +RDAPRT+ PPP V
Sbjct: 330 WDSPARDAPRTTPPPPPPV 348
>09_03_0179 -
13131404-13131514,13131834-13131920,13132316-13132448,
13133079-13133319,13133423-13133540,13133546-13133731,
13133864-13134049,13134443-13134652,13135171-13135347,
13135823-13135964,13136385-13136927,13137565-13138022
Length = 863
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +1
Query: 445 ATATAKLSEASQAADESERIRKALENRTNMEDDRVA-ILEAQLSQAKLIAEESDKKYEEV 621
A A+ E AA+E+ER+R + + R+A + + + +++ E S+ ++++V
Sbjct: 98 AAREAEARERDLAAEEAERLRGVVRRQRKELRARIAEVAREEAERKRVLGERSNARHKQV 157
>05_01_0521 +
4500268-4500283,4500364-4500680,4500999-4501094,
4501219-4501296,4501333-4501557,4502842-4502910,
4502946-4503200
Length = 351
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 405 TAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 539
+ G G R RG R R RG GR ++ ++ PH+H G
Sbjct: 36 SGGRGGRGGRGGRTPRGRGGGRGGGGRGGMKGGSKVVVVPHKHDG 80
>03_01_0320 - 2510907-2512190
Length = 427
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/43 (32%), Positives = 18/43 (41%)
Frame = -3
Query: 562 PPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDAP 434
PP+ +R P CW PAP + R R+ DAP
Sbjct: 14 PPQPRRGKPGCWNTPPAPPKVCHYWKSGRCSRNPCRFLHTDAP 56
>01_03_0202 - 13762042-13762572
Length = 176
Score = 27.5 bits (58), Expect = 9.9
Identities = 15/30 (50%), Positives = 17/30 (56%), Gaps = 1/30 (3%)
Frame = -3
Query: 493 IHRRPGWPRTAW-RWRSRDAPRTSRGPPPA 407
I RRP TA R R+R PRT R PP+
Sbjct: 44 IRRRPSASATATVRRRARTRPRTRRSKPPS 73
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,206,320
Number of Sequences: 37544
Number of extensions: 374033
Number of successful extensions: 1388
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1382
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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