Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K17
(654 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 76 3e-14
SB_36560| Best HMM Match : Tropomyosin (HMM E-Value=9.6e-07) 46 3e-05
SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.007
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 35 0.050
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.27
SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0) 31 1.1
SB_12891| Best HMM Match : DUF164 (HMM E-Value=0.072) 31 1.1
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.4
SB_59609| Best HMM Match : Tektin (HMM E-Value=0) 30 1.4
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.5
SB_27455| Best HMM Match : Extensin_2 (HMM E-Value=0.75) 29 2.5
SB_25350| Best HMM Match : Collagen (HMM E-Value=0) 29 3.3
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 29 4.4
SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.8
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 28 5.8
SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098) 28 7.6
SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.6
SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027) 28 7.6
SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17) 28 7.6
SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05) 28 7.6
SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18) 28 7.6
SB_8304| Best HMM Match : PLAT (HMM E-Value=0) 28 7.6
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 75.8 bits (178), Expect = 3e-14
Identities = 39/100 (39%), Positives = 60/100 (60%)
Frame = +1
Query: 355 RXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNM 534
R + AE+EVAAL +++Q A +L+EA + ADESER RK LENR
Sbjct: 35 RADSAETEVAALTKQLQQLEDDLDAAESKLADTQGQLTEAEKQADESERARKVLENRGAS 94
Query: 535 EDDRVAILEAQLSQAKLIAEESDKKYEEVARKLAMVXADL 654
+++R+A LE Q + A EE++K+YEE++ +L + +L
Sbjct: 95 DEERLASLERQYNDALERTEEAEKQYEEISERLQELENEL 134
Score = 28.7 bits (61), Expect = 4.4
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Frame = +1
Query: 355 RXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALE----- 519
R EEAE + ++ R+Q A A++ E + ++LE
Sbjct: 112 RTEEAEKQYEEISERLQELENELEEAEQKADAAEARVKELEEEVTLVGNNLRSLEISEGK 171
Query: 520 --NRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLAMVXADL 654
R + ++++ LE +L A+ AE++++K +E+ + + A L
Sbjct: 172 ASEREDTYENQIRELETKLQDAEERAEKAEQKVQELEAQAEAMEAVL 218
>SB_36560| Best HMM Match : Tropomyosin (HMM E-Value=9.6e-07)
Length = 245
Score = 46.0 bits (104), Expect = 3e-05
Identities = 31/122 (25%), Positives = 50/122 (40%)
Frame = +1
Query: 253 LXVLKXKMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXX 432
+ VLK K+ QT K L++ R AE E L RI+
Sbjct: 1 MDVLKKKVVQTRQEIEKAENKERYIRKLLRLTSERATLAEMEADGLKNRIKEMEKQIERV 60
Query: 433 XXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKY 612
L+ AD+SE+ RKA+E + D++A+LE + + + +E + +
Sbjct: 61 NARTERLGQGLTAKESEADDSEKDRKAMEGKEYDHSDQIALLETRCADMMRLVDEKEIRL 120
Query: 613 EE 618
EE
Sbjct: 121 EE 122
>SB_833| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 242
Score = 37.9 bits (84), Expect = 0.007
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 1/103 (0%)
Frame = +1
Query: 346 EIMRXEEAE-SEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALEN 522
E EEA+ +E ++ RRI KL++ D E +RK LE+
Sbjct: 33 EARAREEAQLAEAESMQRRILLLSEELRKTEERLEEQEDKLADLKDRTDTHEEVRKELED 92
Query: 523 RTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLAMVXAD 651
D+++ LEA+L + + +E+ K E R+ ++ D
Sbjct: 93 YEMEGDEKLLDLEAKLKEVERQEKETLDKLHEAQRREVVLTKD 135
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 35.1 bits (77), Expect = 0.050
Identities = 19/68 (27%), Positives = 34/68 (50%)
Frame = +1
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
A K++E ++SE + LE + RV +LE QL++ + + +++ +E K
Sbjct: 1423 AERKITELKATLEKSEEVNYDLERELEVAKRRVMVLEDQLTKTQKQRTQCNEQLDETRVK 1482
Query: 631 LAMVXADL 654
L ADL
Sbjct: 1483 LQKTKADL 1490
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 32.7 bits (71), Expect = 0.27
Identities = 27/104 (25%), Positives = 43/104 (41%), Gaps = 4/104 (3%)
Frame = +1
Query: 355 RXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEA--SQAADES--ERIRKALEN 522
R E + + + N ++Q T A++ S +A E ER+RK E
Sbjct: 3587 REAELKLDFTSTNSKLQSYVLERECWEREVKTVLAEIEHQKNSNSAKEQRLERLRKRYEQ 3646
Query: 523 RTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLAMVXADL 654
RV LE +L + A E + +E+A KLA+ D+
Sbjct: 3647 EIGFLSQRVTALERELRVVQE-ASEQQRHADEIAAKLALEAKDM 3689
>SB_56523| Best HMM Match : Pox_A_type_inc (HMM E-Value=0)
Length = 2858
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/110 (22%), Positives = 46/110 (41%), Gaps = 4/110 (3%)
Frame = +1
Query: 337 LQVEIMRXEEAE----SEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERI 504
L+V++ + E+A S VA ++ I A L A+ AAD +
Sbjct: 958 LEVKLSQQEKANQALNSVVAKKDKVIADINEKIKKYQKAADEAKRDLVAANVAADAAREE 1017
Query: 505 RKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLAMVXADL 654
++ +E + N DR+ LE ++ + K + + + KLA+ L
Sbjct: 1018 KRDMERKFNSLKDRIDALEKEIKELKAQRNNLETELSNKSHKLAITEGQL 1067
>SB_12891| Best HMM Match : DUF164 (HMM E-Value=0.072)
Length = 416
Score = 30.7 bits (66), Expect = 1.1
Identities = 25/101 (24%), Positives = 36/101 (35%), Gaps = 1/101 (0%)
Frame = +1
Query: 337 LQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKAL 516
L+ EI R E+AE + K +A + + L
Sbjct: 294 LRKEITRLEDAEKSSKKEKDELNLEISKRDRKITMLEEDMTKREKARTGTRGMRDVEEEL 353
Query: 517 ENRTNMEDDRVAILEAQLSQAKLIAEESDK-KYEEVARKLA 636
DRV LEA+L Q K +EE K + +E+ K A
Sbjct: 354 REELKQTKDRVVTLEAELEQLKAKSEERVKSQVDEIENKWA 394
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/96 (21%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = +1
Query: 355 RXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEAS----QAADESERIRKALEN 522
+ +E++ +++ L + A KL E S +A +ES +L+
Sbjct: 1225 KLKESKDKISKLEGTLNDKAKALEKAHLSLKEAETKLEEMSTNNVKAVEESNEKITSLKA 1284
Query: 523 RTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
N +DD + ++A L +A+ +E ++ EEV ++
Sbjct: 1285 LINQKDDALEKIKASLKEAEERFQELNRTLEEVQKE 1320
>SB_59609| Best HMM Match : Tektin (HMM E-Value=0)
Length = 402
Score = 30.3 bits (65), Expect = 1.4
Identities = 18/66 (27%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Frame = +1
Query: 448 TATAKLSEASQAADESERIRKALENRT-NMEDDRVAILEAQLSQAKLIAEESDKKYEEVA 624
TA + + A + DESER+R +E RT ++D L+ +++ E D+ E
Sbjct: 26 TAEKERAAAERLRDESERLRVEIEVRTVETQEDVNKKLDQRITDINFWKSELDRNQSETE 85
Query: 625 RKLAMV 642
++ M+
Sbjct: 86 EEINMM 91
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.5 bits (63), Expect = 2.5
Identities = 22/91 (24%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +1
Query: 364 EAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNME-D 540
+ +SE+A +++R++ AKLSE A++ E+ KALE+R+ E
Sbjct: 443 DKQSELARVSKRMESKTNEMKKIVKELR---AKLSEKETLANDLEQKLKALEDRSITEKS 499
Query: 541 DRVAILEAQLSQAKLIAEESDKKYEEVARKL 633
+ V + E++L+ E+ ++ + ++L
Sbjct: 500 EAVLLFESKLATLNKTIEDLTQEVSQKDKQL 530
>SB_27455| Best HMM Match : Extensin_2 (HMM E-Value=0.75)
Length = 159
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Frame = -3
Query: 562 PPRWQRD-HPPCWCGSPAPCVFARIHRRPGWPR 467
PP+W+RD PP W +P + R P W R
Sbjct: 78 PPQWKRDSSPPQWKRDSSPPQWKRDSSPPQWKR 110
Score = 29.5 bits (63), Expect = 2.5
Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 4/52 (7%)
Frame = -3
Query: 562 PPRWQRD-HPPCWCGSPAPCVFARIHRRPGW--PRTAWRW-RSRDAPRTSRG 419
PP+W+RD PP W +P + R P W T +W R P+ RG
Sbjct: 105 PPQWKRDSSPPQWKQDLSPPQWKRESTPPQWKLESTPPQWKRDSSPPQWKRG 156
Score = 27.9 bits (59), Expect = 7.6
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -3
Query: 562 PPRWQRD-HPPCWCGSPAPCVFARIHRRPGW 473
PP+W+RD PP W +P + R P W
Sbjct: 42 PPQWKRDSSPPQWKRDSSPPQWKRDSSPPQW 72
>SB_25350| Best HMM Match : Collagen (HMM E-Value=0)
Length = 1112
Score = 29.1 bits (62), Expect = 3.3
Identities = 17/53 (32%), Positives = 23/53 (43%)
Frame = +3
Query: 378 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHG 536
+G P PT G + VRGA + + + G PG + R T G P G
Sbjct: 155 TGQTGPRGPTGPPGLQGVRGAPGNEGARGLPGNPGLKGKRGATGSRGSPGNQG 207
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 28.7 bits (61), Expect = 4.4
Identities = 18/59 (30%), Positives = 33/59 (55%)
Frame = +1
Query: 460 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLA 636
+LS +Q D+ E + KALEN RV L+ + ++ ++ E S K+ + + R+L+
Sbjct: 600 ELSAKNQQLDKLENVNKALEN-------RVDALKQEYTKTQVTTEVSTKQKDALERELS 651
>SB_28087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1501
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = +1
Query: 463 LSEASQAADESERI--RKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
L E + DE R RK LE+ ED++ E + S IAEE +K E+ R+
Sbjct: 1199 LEEERRREDERRREEDRKRLEDLKRFEDEKRRAEEEKKSAELRIAEEVRRKAEQARRQ 1256
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/83 (19%), Positives = 39/83 (46%)
Frame = +1
Query: 355 RXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERIRKALENRTNM 534
+ +EAE+++AAL + + TA+ +L E +E++++R L+ +
Sbjct: 1053 QADEAEAKLAALRKEYENVIGELEKTQADLKTASEQLMEMHMKNEENDKLRGHLQEEEAI 1112
Query: 535 EDDRVAILEAQLSQAKLIAEESD 603
+ + ++ Q L+ E ++
Sbjct: 1113 KGIQQQTVQELERQVGLLQERNN 1135
>SB_52106| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0098)
Length = 1177
Score = 27.9 bits (59), Expect = 7.6
Identities = 22/99 (22%), Positives = 39/99 (39%)
Frame = +1
Query: 325 YHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESERI 504
Y K+ + ++ E +SEV LN R+Q A SE + E R+
Sbjct: 231 YQKKCESLMVEIESLKSEVQQLNSRLQNQDELETERKTLKQDCKALESEGEKLRGELGRV 290
Query: 505 RKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 621
R L E+ R + +L + + + E + +E+
Sbjct: 291 RDKLH---YFEESRNSQQTVELKEGESLRREISRITDEL 326
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/54 (35%), Positives = 27/54 (50%)
Frame = +1
Query: 466 SEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
SEA + E R+ L N+ ED+ A L AQ++ A E D+ EEV +
Sbjct: 573 SEADKLHGEVLRLNDILYNKELAEDEERAQLAAQVTSA---TREKDEALEEVEK 623
>SB_29054| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 515
Score = 27.9 bits (59), Expect = 7.6
Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +1
Query: 487 DESERIRKAL-ENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKLA 636
DE ERI KAL E E + A EA + + + I E E RK A
Sbjct: 300 DEDERIAKALAEREAKREAEERAKFEADMKEKRGIHEHRISMMRESERKAA 350
>SB_4371| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0027)
Length = 674
Score = 27.9 bits (59), Expect = 7.6
Identities = 20/91 (21%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +1
Query: 337 LQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADES-ERIRKA 513
+Q + + EE E ++ N+++ A + + DE + IRK
Sbjct: 441 IQAKDEQIEELERQLKEQNKKLTTIKRNQQLEREKQAQLLNDVKKQGNEHDERVDEIRKE 500
Query: 514 LENRTNMEDDRVAILEAQLSQAKLIAEESDK 606
L+ + ++R+A+LE L+++ IA E ++
Sbjct: 501 LKTK----EERIAVLEEALTESVTIAAEREE 527
>SB_54309| Best HMM Match : SH2 (HMM E-Value=5.1e-17)
Length = 1249
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 4/55 (7%)
Frame = +1
Query: 469 EASQAADESERIRKALEN----RTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 621
E +A DE +R++ ++ R E+D +A E +L + + E+ K+Y+E+
Sbjct: 442 ERQRAEDERQRVKHEMQRLKDERRRAEEDEIARQEEELRRLQEQREKELKRYKEL 496
>SB_44156| Best HMM Match : Extensin_2 (HMM E-Value=0.05)
Length = 1878
Score = 27.9 bits (59), Expect = 7.6
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 2/50 (4%)
Frame = +1
Query: 481 AADESERIRKAL--ENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVA 624
AA E ER+R++L EN R ++ + QLSQ + + +K +++A
Sbjct: 550 AAAERERLRESLSVENSVRSNLGRQSLAQVQLSQVDTLRDPRLQKVQKIA 599
>SB_31403| Best HMM Match : PAN (HMM E-Value=2.7e-18)
Length = 1051
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/38 (36%), Positives = 18/38 (47%)
Frame = +1
Query: 505 RKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 618
R LEN N + D + L A+L EE +YEE
Sbjct: 214 RDELENTVNKKQDEIEALNAKLEILTREVEEERHRYEE 251
>SB_8304| Best HMM Match : PLAT (HMM E-Value=0)
Length = 1182
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 463 LSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
++E + A ER +K +EN+ DD + LE + ++ EE K+ EE +K
Sbjct: 601 INEELRMAAAEER-KKEIENKKKEIDDEMRKLEEERTERDRQKEEERKRREEEEKK 655
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,721,207
Number of Sequences: 59808
Number of extensions: 360986
Number of successful extensions: 1158
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1015
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1669334250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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