Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K17
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein. 122 2e-28
D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein. 122 2e-28
AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical ... 122 2e-28
AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical ... 111 4e-25
AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin i... 111 4e-25
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 103 8e-23
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 103 8e-23
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 103 8e-23
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 103 8e-23
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 103 8e-23
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 103 8e-23
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 88 4e-18
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.31
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 32 0.31
AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain (... 32 0.31
AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : short... 31 0.54
Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical p... 30 1.2
Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical p... 30 1.2
Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical pr... 30 1.2
AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein. 30 1.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 30 1.6
L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical pr... 29 2.9
X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2 prot... 24 3.7
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 24 3.7
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 29 3.8
AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen prot... 29 3.8
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 28 5.0
L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy c... 28 5.0
L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated p... 28 5.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 28 5.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 5.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 5.0
AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical... 28 5.0
AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen pro... 28 5.0
AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen pro... 28 5.0
AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy... 28 5.0
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 28 6.7
Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine re... 28 6.7
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 27 8.8
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 27 8.8
>D38542-1|BAA07545.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 122 bits (294), Expect = 2e-28
Identities = 64/139 (46%), Positives = 90/139 (64%)
Frame = +1
Query: 238 QQGTILXVLKXKMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXX 417
QQ ++L VLK KMRQ ++L+ E + E+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 418 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 597
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +AK+IAE+
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAED 129
Query: 598 SDKKYEEVARKLAMVXADL 654
+D+KYEEVARKLAMV ADL
Sbjct: 130 ADRKYEEVARKLAMVEADL 148
>D38539-3|BAA07542.1| 256|Caenorhabditis elegans CeTMIII protein.
Length = 256
Score = 122 bits (294), Expect = 2e-28
Identities = 64/139 (46%), Positives = 90/139 (64%)
Frame = +1
Query: 238 QQGTILXVLKXKMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXX 417
QQ ++L VLK KMRQ ++L+ E + E+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 418 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 597
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +AK+IAE+
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAED 129
Query: 598 SDKKYEEVARKLAMVXADL 654
+D+KYEEVARKLAMV ADL
Sbjct: 130 ADRKYEEVARKLAMVEADL 148
>AL132877-5|CAD45604.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1e protein.
Length = 256
Score = 122 bits (294), Expect = 2e-28
Identities = 64/139 (46%), Positives = 90/139 (64%)
Frame = +1
Query: 238 QQGTILXVLKXKMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXX 417
QQ ++L VLK KMRQ ++L+ E + E+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 418 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 597
TAT+KL +A++AADE++R RK++E R+ +++R LE Q+ +AK+IAE+
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRARKSMETRSQQDEERANFLETQVDEAKVIAED 129
Query: 598 SDKKYEEVARKLAMVXADL 654
+D+KYEEVARKLAMV ADL
Sbjct: 130 ADRKYEEVARKLAMVEADL 148
>AL132877-3|CAC70115.1| 256|Caenorhabditis elegans Hypothetical
protein Y105E8B.1c protein.
Length = 256
Score = 111 bits (267), Expect = 4e-25
Identities = 62/139 (44%), Positives = 86/139 (61%)
Frame = +1
Query: 238 QQGTILXVLKXKMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXX 417
QQ ++L VLK KMRQ ++L+ E + E+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 418 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 597
TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L + + I E
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKLRECQSILHE 129
Query: 598 SDKKYEEVARKLAMVXADL 654
++ K EEVARKLAMV ADL
Sbjct: 130 TENKAEEVARKLAMVEADL 148
>AF298180-1|AAG10302.1| 256|Caenorhabditis elegans tropomyosin
isoform IV protein.
Length = 256
Score = 111 bits (267), Expect = 4e-25
Identities = 62/139 (44%), Positives = 86/139 (61%)
Frame = +1
Query: 238 QQGTILXVLKXKMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXX 417
QQ ++L VLK KMRQ ++L+ E + E+AE+EVAALNRRI
Sbjct: 10 QQTSLLDVLKKKMRQAREEAEAAKDEADEVKRQLEEERKKREDAEAEVAALNRRIVLVEE 69
Query: 418 XXXXXXXXXATATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEE 597
TAT+KL +A++AADE++R R+AL N+ +M+DDR + LE +L + + I E
Sbjct: 70 DLERTEDRLKTATSKLEQATKAADEADRSRRALSNQIDMDDDRCSDLERKLRECQSILHE 129
Query: 598 SDKKYEEVARKLAMVXADL 654
++ K EEVARKLAMV ADL
Sbjct: 130 TENKAEEVARKLAMVEADL 148
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 103 bits (248), Expect = 8e-23
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +1
Query: 271 KMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXAT 450
KM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 49 KMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKI 108
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 169 LAMVEADL 176
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 103 bits (248), Expect = 8e-23
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +1
Query: 271 KMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXAT 450
KM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 49 KMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKI 108
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 169 LAMVEADL 176
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 103 bits (248), Expect = 8e-23
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +1
Query: 271 KMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXAT 450
KM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 49 KMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKI 108
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 169 LAMVEADL 176
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 103 bits (248), Expect = 8e-23
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +1
Query: 271 KMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXAT 450
KM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 49 KMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKI 108
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 169 LAMVEADL 176
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 103 bits (248), Expect = 8e-23
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +1
Query: 271 KMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXAT 450
KM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 49 KMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKI 108
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 169 LAMVEADL 176
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 103 bits (248), Expect = 8e-23
Identities = 56/128 (43%), Positives = 77/128 (60%)
Frame = +1
Query: 271 KMRQTXXXXXXXXXXXXXYHKRLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXAT 450
KM QT +L+ + +EAE+EVA+LNRR+
Sbjct: 49 KMTQTGDDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKI 108
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 109 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 168
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 169 LAMVEADL 176
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 88.2 bits (209), Expect = 4e-18
Identities = 41/68 (60%), Positives = 55/68 (80%)
Frame = +1
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
AT KL EA+ DESER+RK +ENR+ +++R +EAQL +A+L+AEE+D+KY+EVARK
Sbjct: 18 ATEKLEEATHNVDESERVRKVMENRSLQDEERANTVEAQLKEAQLLAEEADRKYDEVARK 77
Query: 631 LAMVXADL 654
LAMV ADL
Sbjct: 78 LAMVEADL 85
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
A+A+ A + E+++KA ++ + R LEA QAKL +E+ + EE+ +
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLK 879
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +1
Query: 451 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
A+A+ A + E+++KA ++ + R LEA QAKL +E+ + EE+ +
Sbjct: 821 ASAEKKIAKLTSQFEEKLKKAQNSQDEASESRFKTLEASAEQAKLESEQKLRALEELLK 879
>AC024201-3|AAK93866.1| 238|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 30 protein.
Length = 238
Score = 32.3 bits (70), Expect = 0.31
Identities = 17/43 (39%), Positives = 23/43 (53%)
Frame = +1
Query: 490 ESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEE 618
+ E+ RK LE R N E R Q ++ + +AEE K YEE
Sbjct: 156 DREKKRKMLEERANEEKRRSTEALVQAAEKRKLAEEFAKNYEE 198
>AF016687-1|AAC48094.2| 315|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 9 protein.
Length = 315
Score = 31.5 bits (68), Expect = 0.54
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +3
Query: 315 VRGVPQTVASGNYAXRRS*VRSGCPE-PTYPTAGGGPREVRGASRDRHRQAVRGQPGRR* 491
VRG P + R V +G P PT P GPR + G + + GQPG R
Sbjct: 183 VRGEPGSPGEKGPTGDRGKVLNGAPPGPTGPPGKVGPRGLSGGKGHDGKPGLGGQPGVRG 242
Query: 492 IRANTQGAGEP 524
AG P
Sbjct: 243 AVGARGDAGNP 253
>Z70750-13|CAA94745.2| 679|Caenorhabditis elegans Hypothetical
protein C50F4.11 protein.
Length = 679
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 445 ATATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 621
+T A+ +E + A SER+R LEN + +++ + +L + K EES + +EV
Sbjct: 411 STDCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEV 470
Query: 622 ARKLAMVXA 648
V A
Sbjct: 471 LSMTLTVPA 479
>Z68298-10|CAA92607.1| 1034|Caenorhabditis elegans Hypothetical
protein F44D12.1 protein.
Length = 1034
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/104 (22%), Positives = 49/104 (47%), Gaps = 2/104 (1%)
Frame = +1
Query: 337 LQVEIMRXEEAESEVAALNRRIQ-XXXXXXXXXXXXXATATAKLSEASQAADESERIRKA 513
LQ+++ R E + E+ N+R++ + L E S+ +E +R++K
Sbjct: 40 LQIQVHRSETYKMEIEEANKRLRLQYEALQRDYEETMQERSIVLEENSRQNEERDRLQKE 99
Query: 514 LENRTNMEDDRVAILEAQLSQA-KLIAEESDKKYEEVARKLAMV 642
+E + + + VA L+ +L +L+ ++ + ARK A +
Sbjct: 100 IE-KMKEDSEEVAALKQKLENTRRLLKVNMEETAQANARKEAAI 142
Score = 27.9 bits (59), Expect = 6.7
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = +1
Query: 334 RLQVEIMRXEEAESEVAALNRRIQXXXXXXXXXXXXXATATAKLSEASQAADESER 501
RLQ EI + +E EVAAL ++++ A A A+ A E+E+
Sbjct: 95 RLQKEIEKMKEDSEEVAALKQKLENTRRLLKVNMEETAQANARKEAAIARLTEAEQ 150
>Z68219-2|CAA92476.1| 300|Caenorhabditis elegans Hypothetical
protein T05A1.2 protein.
Length = 300
Score = 30.3 bits (65), Expect = 1.2
Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
Frame = +3
Query: 387 PEPTYPTAGG--GPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHLG 560
P+P P G GPR RG + + + G PG+ R G GEP Q G + L
Sbjct: 214 PKPGQPGQPGRAGPRGPRGVAGIKGKDGAPGSPGQPGPRG---GPGEPGQDGAPGQPGLP 270
Query: 561 GSTVT 575
GS T
Sbjct: 271 GSDGT 275
>AF239998-1|AAF63494.1| 679|Caenorhabditis elegans MDF-1 protein.
Length = 679
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 445 ATATAKLSEASQAADESERIRKA-LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEV 621
+T A+ +E + A SER+R LEN + +++ + +L + K EES + +EV
Sbjct: 411 STDCARRNERLEDAFSSERVRSQDLENEKSRLSEQLELSNNELEKVKKQLEESQSQLDEV 470
Query: 622 ARKLAMVXA 648
V A
Sbjct: 471 LSMTLTVPA 479
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 29.9 bits (64), Expect = 1.6
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 6/87 (6%)
Frame = -3
Query: 652 SQXQPWPAYEQ-PLRISCPTPRR*ASPV-TVEPPRWQRDHPPCWCGSP----APCVFARI 491
S+ P P + P + P PRR SP + + PR +R SP +P R
Sbjct: 431 SKSPPAPRRRRSPSQSKSPAPRRRRSPSKSPQAPRRRRSPSGSKSRSPRRRRSPAAAPRR 490
Query: 490 HRRPGWPRTAWRWRSRDAPRTSRGPPP 410
+ P R+ R RS + SR PPP
Sbjct: 491 RQSPQRRRSPRRRRSPSSSSRSRSPPP 517
>L23646-1|AAA28041.1| 244|Caenorhabditis elegans Hypothetical
protein F44E2.3 protein.
Length = 244
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +1
Query: 448 TATAKLSEASQAADESERIRKALENRTNMEDDRVAI--LEAQLSQAKLIAEESDKKYEEV 621
+A ++ + +A E+E + E + E+ R LEA+L + L AEES KK+EE
Sbjct: 135 SARNEMEKMLRAQIEAEMAVELAECKKRDEESRKKCKQLEAELERKVLEAEESRKKFEE- 193
Query: 622 ARKLAMV 642
+LAM+
Sbjct: 194 -DRLAML 199
>X74838-1|CAA52832.1| 231|Caenorhabditis elegans cuticlin 2
protein.
Length = 231
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 526 CGSPAPCVFARIHRRPGWPRTA 461
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 3.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 538 PPCWCGSPA 512
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 23.8 bits (49), Expect(2) = 3.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 526 CGSPAPCVFARIHRRPGWPRTA 461
CG PAPC A I G TA
Sbjct: 67 CGGPAPCAAAPIAAPAGGYATA 88
Score = 23.4 bits (48), Expect(2) = 3.7
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = -3
Query: 538 PPCWCGSPA 512
PPC CG+PA
Sbjct: 36 PPCGCGAPA 44
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Frame = +1
Query: 460 KLSEASQAADESER-IRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
K E + + ER IR+ +E + EDDR+A + Q++Q +L + ++ EE ARK
Sbjct: 1011 KEREKREEKERKEREIREIMERKKREEDDRIA-AKLQIAQ-QLENDRKMREAEESARK 1066
>AF003150-3|AAB54214.1| 208|Caenorhabditis elegans Collagen protein
55 protein.
Length = 208
Score = 28.7 bits (61), Expect = 3.8
Identities = 16/46 (34%), Positives = 20/46 (43%)
Frame = +3
Query: 402 PTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG 539
P GP GA ++ V GQPG + G G+P Q GG
Sbjct: 103 PAGPPGPPGQPGAQGEQGHVEVSGQPGAPRPQGPAGGPGQPVQSGG 148
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/54 (33%), Positives = 29/54 (53%)
Frame = +1
Query: 469 EASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
E Q +E RI++ E + + ++ A + + +A+L AEE K YEE RK
Sbjct: 526 ELKQREEEEARIKEEEEKQRKILEEE-ARKKQEEEEARLKAEEELKIYEEEKRK 578
>L19120-1|AAA28155.1| 815|Caenorhabditis elegans kinesin heavy
chain protein.
Length = 815
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 514 LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKL 633
+E R +DR+ ILE L +K ++ KKY++ ++
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERI 771
>L07144-3|AAK21446.1| 815|Caenorhabditis elegans Uncoordinated
protein 116 protein.
Length = 815
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 514 LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKL 633
+E R +DR+ ILE L +K ++ KKY++ ++
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERI 771
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 448 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
+ T+K S ESE + A R E D LEA+++ K E+S + E +
Sbjct: 9783 SVTSKTVVESGGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLK 9842
Query: 628 KLAMVXA 648
K A V A
Sbjct: 9843 KAAEVEA 9849
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 448 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
+ T+K S ESE + A R E D LEA+++ K E+S + E +
Sbjct: 9803 SVTSKTVVESGGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLK 9862
Query: 628 KLAMVXA 648
K A V A
Sbjct: 9863 KAAEVEA 9869
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 454 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKL 633
T+K S ESE + A R E D LEA+++ K E+S + E +K
Sbjct: 13438 TSKTVVESAGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLKKA 13497
Query: 634 AMVXA 648
A V A
Sbjct: 13498 AEVEA 13502
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +1
Query: 448 TATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVAR 627
+ T+K S ESE + A R E D LEA+++ K E+S + E +
Sbjct: 9803 SVTSKTVVESGGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLK 9862
Query: 628 KLAMVXA 648
K A V A
Sbjct: 9863 KAAEVEA 9869
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = +1
Query: 454 TAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKL 633
T+K S ESE + A R E D LEA+++ K E+S + E +K
Sbjct: 13438 TSKTVVESAGPSESETQKVADAARKQKETDEKQKLEAEITAKKSADEKSKLEAESKLKKA 13497
Query: 634 AMVXA 648
A V A
Sbjct: 13498 AEVEA 13502
>AL032627-21|CAD66221.1| 289|Caenorhabditis elegans Hypothetical
protein Y41C4A.19 protein.
Length = 289
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 1/73 (1%)
Frame = -3
Query: 595 PRR*ASPVTVEPPRWQRDHPPCWCGSPAPCVFARIHRRPGWPRTAWRWRSRDAPRTSRGP 416
P + P+T P R PP GSP P A +PG+ + + P+ RG
Sbjct: 122 PAQPCDPITPPPCRPCPQGPPGAPGSPGPQGDAGAPGQPGF-GSGFGAPGPAGPKGQRGA 180
Query: 415 PPAVGYVGS-GQP 380
P G G+ GQP
Sbjct: 181 PGHPGQAGAPGQP 193
>AF022985-12|AAB69959.1| 319|Caenorhabditis elegans Collagen
protein 143 protein.
Length = 319
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +3
Query: 378 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHL 557
+G P P P GP+ G + RG PG R + G+P G
Sbjct: 136 AGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGR 195
Query: 558 GGSTVTG 578
GG G
Sbjct: 196 GGQRSRG 202
>AF022985-10|AAB69961.1| 325|Caenorhabditis elegans Collagen
protein 142 protein.
Length = 325
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/67 (26%), Positives = 23/67 (34%)
Frame = +3
Query: 378 SGCPEPTYPTAGGGPREVRGASRDRHRQAVRGQPGRR*IRANTQGAGEPHQHGG*SRCHL 557
+G P P P GP+ G + RG PG R + G+P G
Sbjct: 136 AGAPGPAGPPGAPGPKGNNGQPGAPAQSGGRGPPGPRGPAGDAGSPGQPGHPGSPGNPGR 195
Query: 558 GGSTVTG 578
GG G
Sbjct: 196 GGQRSRG 202
>AB017163-1|BAA32594.1| 815|Caenorhabditis elegans kinesin Heavy
chain protein.
Length = 815
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 514 LENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARKL 633
+E R +DR+ ILE L +K ++ KKY++ ++
Sbjct: 732 MEARLRGREDRIKILETALRDSKQRSQAERKKYQQEVERI 771
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +1
Query: 496 ERIRKALENRTNMEDDRVAILEAQLSQAKLIAEESDKKYEEVARK 630
E +RK R N+E R L+ L K E ++KK+EE+ ++
Sbjct: 106 EDVRKVELQRANLEKQRTEALDIHLETMK---ELNEKKFEEIRQQ 147
>Z81063-6|CAB02957.2| 296|Caenorhabditis elegans Hypothetical
protein F15D3.8 protein.
Length = 296
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/58 (34%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +1
Query: 460 KLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQAKLIAE-ESDKKYEEVARK 630
K+ E +Q + E R++LEN M+D R IL + A LI + E + K E R+
Sbjct: 10 KMEEDAQRRHQ-ELNRQSLENAAEMKDSRRKILNKEFEGAILIKQVEHETKQVEKKRE 66
>AF016450-6|AAB65982.1| 311|Caenorhabditis elegans Serpentine
receptor, class t protein67 protein.
Length = 311
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = -2
Query: 242 CCMFVVILIHFCVKIECLNXNKQRHLRPTRENAN*QPRSS 123
C ++++ H ++I+CL K R+ T++ PRSS
Sbjct: 272 CHPIIILIFHKTIRIDCLLKLKLRYNSSTQQRVWKPPRSS 311
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 27.5 bits (58), Expect = 8.8
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 6/66 (9%)
Frame = +1
Query: 457 AKLSEASQAADESERIRKALENRTNMED------DRVAILEAQLSQAKLIAEESDKKYEE 618
A+L +A QAA +++ + + + E + A EAQL+Q IAEE KK E
Sbjct: 1229 AQLIQALQAAKDAQTAKLVAQEKAKKEAQEKARREAEAKKEAQLAQLMKIAEERSKK--E 1286
Query: 619 VARKLA 636
A K A
Sbjct: 1287 AAEKKA 1292
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 27.5 bits (58), Expect = 8.8
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -3
Query: 634 PAYEQPLRISCPTPRR*ASPVTVEPPRWQRDHPPCWCGS 518
PA P R CP P A P PP + P CGS
Sbjct: 123 PAPPNPPRTCCPPPTPAAPPPPPPPPPPAPEAPTQCCGS 161
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,808,269
Number of Sequences: 27780
Number of extensions: 269168
Number of successful extensions: 975
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 956
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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