Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_K14
         (638 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.          22   5.8  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    22   5.8  
AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.      22   5.8  
DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channe...    21   7.6  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   7.6  

>EF625896-1|ABR45903.1|  683|Apis mellifera hexamerin protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 267 PTLRSSYIQILIGIHTRIS 323
           P     Y+Q++  +HTRIS
Sbjct: 316 PLHMQKYVQMIHDLHTRIS 334


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 6/16 (37%), Positives = 14/16 (87%)
 Frame = +3

Query: 96  LITKILKKSKCDISLI 143
           L+ ++++ +KCD+SL+
Sbjct: 402 LVDELVRGTKCDVSLL 417


>AY601637-1|AAT11850.1|  683|Apis mellifera hexamerin 70b protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 267 PTLRSSYIQILIGIHTRIS 323
           P     Y+Q++  +HTRIS
Sbjct: 316 PLHMQKYVQMIHDLHTRIS 334


>DQ667183-1|ABG75735.1|  463|Apis mellifera GABA-gated ion channel
           protein.
          Length = 463

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = -3

Query: 387 FPTVLFQLNLFYF*AFLVR 331
           FP     +N+FY+ A+L R
Sbjct: 431 FPLFFLAINVFYWFAYLSR 449


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/21 (38%), Positives = 13/21 (61%)
 Frame = +3

Query: 279 SSYIQILIGIHTRISQKALQE 341
           SS+   ++G H  I +K +QE
Sbjct: 357 SSFFLAVMGCHPDIQEKVIQE 377


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,271
Number of Sequences: 438
Number of extensions: 2651
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19193721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)