BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_K08 (654 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 288 5e-79 SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 287 7e-79 SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 287 7e-79 SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related prote... 158 6e-40 SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 156 3e-39 SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 98 8e-22 SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 50 4e-07 SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 44 2e-05 SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma su... 40 4e-04 SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 35 0.012 SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 33 0.036 SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 32 0.063 SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 32 0.063 SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 30 0.25 SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces p... 30 0.34 SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1||... 29 0.44 SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharo... 29 0.44 SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharom... 27 1.8 SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 27 2.4 >SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual Length = 460 Score = 288 bits (706), Expect = 5e-79 Identities = 136/170 (80%), Positives = 149/170 (87%) Frame = +2 Query: 143 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 322 HLIYKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY Sbjct: 26 HLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY 85 Query: 323 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGV 502 VT+IDAPGHRDFIKNMITGTSQADCAVLI+ GTGEFE GISK+GQTREHALLA+TLGV Sbjct: 86 NVTVIDAPGHRDFIKNMITGTSQADCAVLIIGGGTGEFEAGISKDGQTREHALLAYTLGV 145 Query: 503 KQLIVXVNKMDSTEPPYSEPXFXEIXXEVSSYIKXIGYNPXAVAFVPISG 652 KQLIV VNKMD+T +S+ F EI E S++IK +G+NP V FVP+SG Sbjct: 146 KQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSG 193 Score = 54.0 bits (124), Expect = 2e-08 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = +1 Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGSL 147 MGKEK HIN+VVIGHVDSGKSTTTG L Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27 >SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual Length = 460 Score = 287 bits (705), Expect = 7e-79 Identities = 135/170 (79%), Positives = 149/170 (87%) Frame = +2 Query: 143 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 322 HLIYKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY Sbjct: 26 HLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY 85 Query: 323 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGV 502 VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFE GISK+GQTREHALLA+TLGV Sbjct: 86 NVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGV 145 Query: 503 KQLIVXVNKMDSTEPPYSEPXFXEIXXEVSSYIKXIGYNPXAVAFVPISG 652 KQLIV VNKMD+T +S+ F EI E S++IK +G+NP V FVP+SG Sbjct: 146 KQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSG 193 Score = 54.0 bits (124), Expect = 2e-08 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = +1 Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGSL 147 MGKEK HIN+VVIGHVDSGKSTTTG L Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27 >SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual Length = 460 Score = 287 bits (705), Expect = 7e-79 Identities = 135/170 (79%), Positives = 149/170 (87%) Frame = +2 Query: 143 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 322 HLIYKCGGIDKRTI KFEKEA E+GKGSFKYAWVLDKLKAERERGITIDIALWKFET KY Sbjct: 26 HLIYKCGGIDKRTIEKFEKEATELGKGSFKYAWVLDKLKAERERGITIDIALWKFETPKY 85 Query: 323 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGV 502 VT+IDAPGHRDFIKNMITGTSQADCA+LI+ GTGEFE GISK+GQTREHALLA+TLGV Sbjct: 86 NVTVIDAPGHRDFIKNMITGTSQADCAILIIGGGTGEFEAGISKDGQTREHALLAYTLGV 145 Query: 503 KQLIVXVNKMDSTEPPYSEPXFXEIXXEVSSYIKXIGYNPXAVAFVPISG 652 KQLIV VNKMD+T +S+ F EI E S++IK +G+NP V FVP+SG Sbjct: 146 KQLIVAVNKMDTT--GWSQARFEEIVKETSNFIKKVGFNPKTVPFVPVSG 193 Score = 54.0 bits (124), Expect = 2e-08 Identities = 24/27 (88%), Positives = 25/27 (92%) Frame = +1 Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGSL 147 MGKEK HIN+VVIGHVDSGKSTTTG L Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHL 27 >SPBC25B2.01 ||SPBC2G5.08|elongation factor 1 alpha related protein|Schizosaccharomyces pombe|chr 2|||Manual Length = 592 Score = 158 bits (384), Expect = 6e-40 Identities = 81/169 (47%), Positives = 106/169 (62%), Gaps = 1/169 (0%) Frame = +2 Query: 146 LIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYY 325 ++++ G I+ R++ K EA GKGSF YAW+LD + ER RG+T+D+A FE+ K Sbjct: 197 IMFELGEINSRSMQKLHNEAANSGKGSFSYAWLLDTTEEERARGVTMDVASTTFESDKKI 256 Query: 326 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGVK 505 I DAPGHRDFI MI G S AD AVL+V + FE G +NGQTREHA L LG+ Sbjct: 257 YEIGDAPGHRDFISGMIAGASSADFAVLVVDSSQNNFERGFLENGQTREHAYLLRALGIS 316 Query: 506 QLIVXVNKMDSTEPPYSEPXFXEIXXEVSSY-IKXIGYNPXAVAFVPIS 649 +++V VNK+D +SE F EI VS + IK +G+ V FVPIS Sbjct: 317 EIVVSVNKLDLMS--WSEDRFQEIKNIVSDFLIKMVGFKTSNVHFVPIS 363 Score = 31.5 bits (68), Expect = 0.11 Identities = 13/27 (48%), Positives = 19/27 (70%) Frame = +1 Query: 79 KTHINIVVIGHVDSGKSTTTGSLDLQM 159 K +++VV GHVDSGKST G + ++ Sbjct: 175 KPVVHLVVTGHVDSGKSTMLGRIMFEL 201 >SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosaccharomyces pombe|chr 3|||Manual Length = 662 Score = 156 bits (378), Expect = 3e-39 Identities = 72/171 (42%), Positives = 110/171 (64%), Gaps = 2/171 (1%) Frame = +2 Query: 143 HLIYKCGGIDKRTIXKFEKEAXEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKY 322 ++++ G +DKRT+ K E+EA E GK S+ +W LD ERE+G T+++ FET Sbjct: 257 NILFLTGMVDKRTMEKIEREAKEAGKESWYLSWALDSTSEEREKGKTVEVGRAYFETEHR 316 Query: 323 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGV 502 +++DAPGH+ ++ NMI G SQAD VL+++A GEFE G + GQTREHA+LA T G+ Sbjct: 317 RFSLLDAPGHKGYVTNMINGASQADIGVLVISARRGEFEAGFERGGQTREHAVLARTQGI 376 Query: 503 KQLIVXVNKMDSTEPPYSEPXFXEIXXEVSSYIKXI-GYNPXA-VAFVPIS 649 L+V +NKMD +SE + E ++S +++ + GYN V ++P+S Sbjct: 377 NHLVVVINKMDEPSVQWSEERYKECVDKLSMFLRRVAGYNSKTDVKYMPVS 427 Score = 37.5 bits (83), Expect = 0.002 Identities = 15/23 (65%), Positives = 19/23 (82%) Frame = +1 Query: 79 KTHINIVVIGHVDSGKSTTTGSL 147 K H+NIV IGHVD+GKST G++ Sbjct: 236 KEHVNIVFIGHVDAGKSTLGGNI 258 >SPBC9B6.04c |tuf1||mitochondrial translation elongation factor EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual Length = 439 Score = 98.3 bits (234), Expect = 8e-22 Identities = 53/130 (40%), Positives = 76/130 (58%) Frame = +2 Query: 209 EMGKGSFKYAWVLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTS 388 ++G+ SF +DK E+ RGITI A ++ET + +D PGH D+IKNMITG + Sbjct: 79 DLGQASFMDYSQIDKAPEEKARGITISSAHVEYETANRHYAHVDCPGHADYIKNMITGAA 138 Query: 389 QADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGVKQLIVXVNKMDSTEPPYSEPXF 568 D A+++V+A G+ QTREH LLA +GVKQ++V +NK+D EP E Sbjct: 139 TMDGAIIVVSATDGQMP-------QTREHLLLARQVGVKQIVVYINKVDMVEPDMIELVE 191 Query: 569 XEIXXEVSSY 598 E+ +S Y Sbjct: 192 MEMRELLSEY 201 Score = 34.7 bits (76), Expect = 0.012 Identities = 13/25 (52%), Positives = 19/25 (76%) Frame = +1 Query: 73 KEKTHINIVVIGHVDSGKSTTTGSL 147 ++K H+NI IGHVD GK+T T ++ Sbjct: 49 RKKPHVNIGTIGHVDHGKTTLTAAI 73 >SPBC660.10 |||translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 813 Score = 49.6 bits (113), Expect = 4e-07 Identities = 34/98 (34%), Positives = 47/98 (47%) Frame = +2 Query: 242 VLDKLKAERERGITIDIALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAA 421 V+D L AER+RGITI+ A F + +ID PGH DF + + D AV I+ Sbjct: 67 VMDYLPAERQRGITINSAAISFTWRNQRINLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126 Query: 422 GTGEFEXGISKNGQTREHALLAFTLGVKQLIVXVNKMD 535 G QT+ A G+ + ++ VNKMD Sbjct: 127 SAG-------VEAQTKVVWKQATKRGIPK-VIFVNKMD 156 Score = 25.0 bits (52), Expect = 9.5 Identities = 8/16 (50%), Positives = 13/16 (81%) Frame = +1 Query: 91 NIVVIGHVDSGKSTTT 138 N+ +I H+D+GK+T T Sbjct: 30 NVGIIAHIDAGKTTLT 45 >SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces pombe|chr 1|||Manual Length = 646 Score = 44.0 bits (99), Expect = 2e-05 Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 4/101 (3%) Frame = +2 Query: 245 LDKLKAERERGITIDIA----LWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 412 LDKL+ ER RGIT+ ++ + Y + +ID PGH DF ++ + + +L+ Sbjct: 95 LDKLEVERRRGITVKAQTCSMIYYYHGQSYLLNLIDTPGHVDFRAEVMHSLAACEGCILL 154 Query: 413 VAAGTGEFEXGISKNGQTREHALLAFTLGVKQLIVXVNKMD 535 V A G QT + +AF+ + +I +NK+D Sbjct: 155 VDASQG-------IQAQTLSNFYMAFSQNL-VIIPVLNKVD 187 >SPBC17G9.09 |tif213||translation initiation factor eIF2 gamma subunit|Schizosaccharomyces pombe|chr 2|||Manual Length = 446 Score = 39.5 bits (88), Expect = 4e-04 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = +2 Query: 323 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREHALLAFTLGV 502 +V+ +D PGH + M+ G + D A+L++A QT EH + + Sbjct: 109 HVSFVDCPGHDILMATMLNGAAVMDAALLLIAGNES------CPQPQTSEHLAAIEIMQL 162 Query: 503 KQLIVXVNKMDSTEPPYSEPXFXEI 577 K +I+ NK+D +E + I Sbjct: 163 KHIIILQNKVDLIRESAAEEHYQSI 187 Score = 25.4 bits (53), Expect = 7.2 Identities = 12/29 (41%), Positives = 16/29 (55%) Frame = +1 Query: 61 PKMGKEKTHINIVVIGHVDSGKSTTTGSL 147 P + + INI IGHV GKST ++ Sbjct: 15 PAIISRQATINIGTIGHVAHGKSTVVKAI 43 >SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual Length = 686 Score = 34.7 bits (76), Expect = 0.012 Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 2/74 (2%) Frame = +2 Query: 215 GKGSFKYAWVLDKLKAERERGITIDIALWK--FETXKYYVTIIDAPGHRDFIKNMITGTS 388 GK + A+ + + GIT I + F+ ++T +D PGH F G + Sbjct: 183 GKTTLLDAFRKSTIASTEHGGITQKIGAFTVPFDKGSKFITFLDTPGHMAFEAMRKRGAN 242 Query: 389 QADCAVLIVAAGTG 430 AD VL+VA G Sbjct: 243 IADIVVLVVAGDDG 256 >SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schizosaccharomyces pombe|chr 2|||Manual Length = 770 Score = 33.1 bits (72), Expect = 0.036 Identities = 18/52 (34%), Positives = 26/52 (50%) Frame = +2 Query: 320 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEXGISKNGQTREH 475 Y + IID PGH DF + D AVL++ A +G I+ + Q R + Sbjct: 145 YNINIIDTPGHIDFTIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRY 196 >SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosaccharomyces pombe|chr 3|||Manual Length = 842 Score = 32.3 bits (70), Expect = 0.063 Identities = 16/27 (59%), Positives = 17/27 (62%) Frame = +1 Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGSL 147 MGK N+ VI HVD GKST T SL Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSL 39 Score = 27.9 bits (59), Expect = 1.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 320 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 415 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elongation factor 2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 842 Score = 32.3 bits (70), Expect = 0.063 Identities = 16/27 (59%), Positives = 17/27 (62%) Frame = +1 Query: 67 MGKEKTHINIVVIGHVDSGKSTTTGSL 147 MGK N+ VI HVD GKST T SL Sbjct: 13 MGKPSNVRNMSVIAHVDHGKSTLTDSL 39 Score = 27.9 bits (59), Expect = 1.4 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +2 Query: 320 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 415 + V +ID+PGH DF + D A+++V Sbjct: 98 FLVNLIDSPGHVDFSSEVTAALRVTDGALVVV 129 >SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 1000 Score = 30.3 bits (65), Expect = 0.25 Identities = 13/37 (35%), Positives = 21/37 (56%) Frame = +2 Query: 320 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 430 Y + +ID+PGH DF + + + D A ++V A G Sbjct: 94 YLINLIDSPGHVDFSSEVSSASRLCDGAFVLVDAVEG 130 >SPAPYUG7.03c |mid2||anillin homologue Mid2|Schizosaccharomyces pombe|chr 1|||Manual Length = 704 Score = 29.9 bits (64), Expect = 0.34 Identities = 14/43 (32%), Positives = 23/43 (53%) Frame = -1 Query: 285 IVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMVRLSIPPH 157 I IP+ A S+ N++ + +D LP + S V+L +P H Sbjct: 171 IPIPKKNPARSVCNSKLFNEDTLPAEFEEVSISPPVKLELPTH 213 >SPAC9G1.11c |spn4||septin Spn4|Schizosaccharomyces pombe|chr 1|||Manual Length = 380 Score = 29.5 bits (63), Expect = 0.44 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 3/44 (6%) Frame = +2 Query: 248 DKLKAER-ERGITIDIALWKFETXKYYV--TIIDAPGHRDFIKN 370 +K++A+ E+ + I+I + E +++ T+ID PG DFI N Sbjct: 60 EKVRAKHAEKTVEIEITKAELEEKNFHLRLTVIDTPGFGDFINN 103 >SPAC56F8.03 |||translation initiation factor IF2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 1079 Score = 29.5 bits (63), Expect = 0.44 Identities = 12/28 (42%), Positives = 16/28 (57%) Frame = +2 Query: 332 IIDAPGHRDFIKNMITGTSQADCAVLIV 415 IID PGH F GTS + A+L++ Sbjct: 553 IIDTPGHESFTNLRSRGTSLCNIAILVI 580 >SPCC63.03 |||DNAJ domain protein, DNAJC11 family|Schizosaccharomyces pombe|chr 3|||Manual Length = 642 Score = 27.5 bits (58), Expect = 1.8 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -1 Query: 309 SNFQRAISIVIPRSRSAFSLSNTQAYLKDPLPISWASFSNXSMV 178 S F IS+ +P FSL+ ++ K LPI W S + S V Sbjct: 403 STFGVNISVGVPTGSITFSLNWSRLGQKISLPIMWCSVFDRSAV 446 >SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces pombe|chr 2|||Manual Length = 983 Score = 27.1 bits (57), Expect = 2.4 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 5/56 (8%) Frame = +2 Query: 263 ERERGITID-----IALWKFETXKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 415 ERER ++I +A+ + + ID PGH DF+ + + +D VL+V Sbjct: 185 ERERVMSIKSTPLTLAVSDMKGKTFAFQCIDTPGHVDFVDEVAAPMAISDGVVLVV 240 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 2,329,581 Number of Sequences: 5004 Number of extensions: 41004 Number of successful extensions: 139 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 114 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 132 length of database: 2,362,478 effective HSP length: 70 effective length of database: 2,012,198 effective search space used: 295793106 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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