Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_K07
         (656 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    24   0.96 
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   2.9  
AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine recombi...    22   5.1  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   5.1  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.7  
AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.    21   8.9  
AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.    21   8.9  

>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 24.2 bits (50), Expect = 0.96
 Identities = 11/28 (39%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -3

Query: 582 DGVVQ-NLFQALVVSFREEEHSFGGTFG 502
           +G+V  +L++AL+      + +FGGTFG
Sbjct: 511 NGLVDYSLWKALIFQISNLQTTFGGTFG 538


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -1

Query: 116 RLVIRFTYILRPKGLRLSKRAVT 48
           RLV+  + + +P+ LRLS   VT
Sbjct: 376 RLVLTVSSVSKPEALRLSGSVVT 398


>AY531876-2|AAT08871.1|  340|Tribolium castaneum tyrosine
           recombinase protein.
          Length = 340

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -1

Query: 428 SGNNAXPGGRSVVQXQVMVEGAVLVTIVIXLLGKSESSV 312
           S + A PGGR++V+  +  +G       I L   ++ S+
Sbjct: 12  SASEAFPGGRTLVEKGLRKQGVPREATKITLSSLAKGSL 50


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 529 FFTKGYDQSLEEVLN 573
           FF +GY+ S +E+ N
Sbjct: 92  FFNQGYELSKQEIFN 106


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = +2

Query: 452 YSPAWGRTLKGQGS*XRPNVPPKLCS 529
           Y  +WG    G G     ++ P LC+
Sbjct: 28  YYASWGAQRPGNGQFVPEDINPDLCT 53


>AY584475-1|AAS93634.1|  209|Tribolium castaneum homothorax protein.
          Length = 209

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 551 WSYPFVKKSIALAARSGVFKSPALSGS 471
           WS P   ++ + AAR GV  S    GS
Sbjct: 125 WSSPPDARAASDAARRGVLYSSVFLGS 151


>AJ518941-1|CAD57735.1|  456|Tribolium castaneum homothorax protein.
          Length = 456

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = -1

Query: 551 WSYPFVKKSIALAARSGVFKSPALSGS 471
           WS P   ++ + AAR GV  S    GS
Sbjct: 281 WSSPPDARAASDAARRGVLYSSVFLGS 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,058
Number of Sequences: 336
Number of extensions: 3201
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16969115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)