Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_K07
         (656 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical pr...   107   9e-24
Z68227-11|CAA92516.1|  225|Caenorhabditis elegans Hypothetical p...    29   2.2  

>Z72509-6|CAA96650.1|  223|Caenorhabditis elegans Hypothetical
           protein F32G8.6 protein.
          Length = 223

 Score =  107 bits (256), Expect = 9e-24
 Identities = 48/78 (61%), Positives = 59/78 (75%)
 Frame = +1

Query: 421 LPDMANSYRLLLTGLGEDPERAGLLXTPERAAKAMLFFTKGYDQSLEEVLNNAIFDEXTD 600
           L  M N+Y+ ++  +GED  R GLL TPERAAKAM+ FTKGYD  L+E+LN A+FDE  D
Sbjct: 40  LKSMCNAYQSIIQHVGEDINRQGLLKTPERAAKAMMAFTKGYDDQLDELLNEAVFDEDHD 99

Query: 601 XMVVVXDIXMFSMCEHHL 654
            MV+V DI MFS+CEHHL
Sbjct: 100 EMVIVKDIEMFSLCEHHL 117


>Z68227-11|CAA92516.1|  225|Caenorhabditis elegans Hypothetical
           protein F49C12.14 protein.
          Length = 225

 Score = 29.5 bits (63), Expect = 2.2
 Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -1

Query: 221 LRFGALFNVTVTATKIGNGFC*TQGVLDCNDKKPDRLVI-RFTYILRPKGLRLSKRAVTV 45
           L    L  +T   T + N  C T   + C DK  D+L I R    L P GL L  + + +
Sbjct: 3   LNMKKLLILTAIGTSLANASCDTTKFVACQDKFADKLGIDRVFNWLNPLGLTLQIQDIYI 62

Query: 44  XRG 36
             G
Sbjct: 63  NGG 65


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,219,103
Number of Sequences: 27780
Number of extensions: 287881
Number of successful extensions: 610
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 601
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 610
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)