Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K04
(624 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory pro... 23 2.7
AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 2.7
AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless pr... 23 2.7
S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Triboliu... 22 3.6
AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein. 22 3.6
X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein. 22 4.8
U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein. 22 4.8
AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain tran... 22 4.8
AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein. 22 4.8
>DQ855488-1|ABH88175.1| 112|Tribolium castaneum chemosensory
protein 1 protein.
Length = 112
Score = 22.6 bits (46), Expect = 2.7
Identities = 7/13 (53%), Positives = 11/13 (84%)
Frame = +2
Query: 338 CRSGESPPEPLGR 376
C +GE+P +P+GR
Sbjct: 51 CATGEAPCDPVGR 63
>AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain
transcription factor Prothoraxlessprotein.
Length = 323
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 101 PSLQRPPQGRHRPEESARRLQHQLSP*RRHQ 193
P Q+P QG+ P +A L L P R Q
Sbjct: 209 PIQQQPNQGQQPPGNTAAALPSPLYPWMRSQ 239
>AF228509-1|AAF69136.1| 325|Tribolium castaneum prothoraxless
protein.
Length = 325
Score = 22.6 bits (46), Expect = 2.7
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +2
Query: 101 PSLQRPPQGRHRPEESARRLQHQLSP*RRHQ 193
P Q+P QG+ P +A L L P R Q
Sbjct: 211 PIQQQPNQGQQPPGNTAAALPSPLYPWMRSQ 241
>S73225-1|AAB30811.1| 327|Tribolium castaneum protein ( Tribolium
castaneum homeodomainprotein mRNA, complete cds. ).
Length = 327
Score = 22.2 bits (45), Expect = 3.6
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +1
Query: 46 PFLIKNILIHNGLLRE*HSLPAKTSPRSPQT*RVSSKASTPAVS 177
P KNI H + + + +SP + R+SS +ST + S
Sbjct: 39 PLSFKNIESHLNAISQITNSTLDPGRKSPSSPRISSPSSTKSGS 82
>AF321227-1|AAK16421.1| 290|Tribolium castaneum Ftz protein.
Length = 290
Score = 22.2 bits (45), Expect = 3.6
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = +2
Query: 506 SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVT 613
+H E + +V+EEP R + LNH+ +VT
Sbjct: 40 THNNEMYHSVKEEPIYESCRFSINQPYLNHFDNSVT 75
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 240 SSQWRRLQQTEAQSFHWCRRHGDS 169
S++ + + A + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178
>X97819-1|CAA66399.1| 251|Tribolium castaneum ZEN Tc protein.
Length = 251
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 115 TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPXSLYS-TVSRS 273
++PRS SS + S S+ ++ RLL +P+ YS T+ S
Sbjct: 152 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNS 205
>U14732-1|AAC46491.1| 322|Tribolium castaneum fushi-tarazu protein.
Length = 322
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 506 SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVT 613
+H E + V+EEP R + LNH+ +VT
Sbjct: 40 THNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVT 75
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 240 SSQWRRLQQTEAQSFHWCRRHGDS 169
S++ + + A + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178
>AY043292-2|AAK96032.1| 290|Tribolium castaneum homeodomain
transcription factor Fushitarazu protein.
Length = 290
Score = 21.8 bits (44), Expect = 4.8
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 506 SH*AEAHGNVREEPAPHKGRH*AREISLNHYFITVT 613
+H E + V+EEP R + LNH+ +VT
Sbjct: 40 THNNEMYHRVKEEPIYESCRFSINQPYLNHFDNSVT 75
Score = 21.0 bits (42), Expect = 8.4
Identities = 7/24 (29%), Positives = 13/24 (54%)
Frame = -1
Query: 240 SSQWRRLQQTEAQSFHWCRRHGDS 169
S++ + + A + W + HGDS
Sbjct: 155 SAEENSVSEPPANFYPWMKAHGDS 178
>AF321227-4|AAK16424.1| 246|Tribolium castaneum Zen protein.
Length = 246
Score = 21.8 bits (44), Expect = 4.8
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +1
Query: 115 TSPRSPQT*RVSSKASTPAVSVTSTPMKRLCFRLLKTSPLRRPXSLYS-TVSRS 273
++PRS SS + S S+ ++ RLL +P+ YS T+ S
Sbjct: 143 STPRSSPAETASSLSPQSVASTASSADHQIVDRLLSHAPIDSANQWYSQTIDNS 196
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 127,755
Number of Sequences: 336
Number of extensions: 2572
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15979473
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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