Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K04
(624 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_0070 - 20478396-20478505,20478605-20478780,20481162-204812... 33 0.24
02_03_0171 + 15945591-15945681,15947068-15947138,15947715-159478... 33 0.24
09_02_0057 - 3697255-3698116,3698191-3698351,3698442-3698636,369... 31 0.74
03_02_1016 + 13228113-13228964 30 1.3
07_03_1577 - 27869596-27869682,27869769-27869869,27869956-278699... 30 1.7
05_01_0558 - 4880811-4880996,4881098-4881178,4881247-4881393,488... 29 2.3
09_04_0329 + 16726501-16726750,16726843-16726930,16727280-167273... 29 3.0
09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222 29 3.0
02_04_0110 - 19817506-19817847 29 3.0
01_06_0893 - 32766994-32768841,32769596-32769782,32769860-327699... 29 3.0
07_03_0735 + 21075033-21075846,21077065-21077199,21077384-210775... 29 4.0
11_01_0708 + 5817545-5818957 28 5.2
06_03_0723 + 23875008-23875204,23875311-23875576,23877166-238772... 28 5.2
03_02_0755 + 10932897-10933010,10933446-10933577,10933666-109337... 28 6.9
02_01_0290 - 1944550-1944958,1945235-1945335,1945459-1945719 28 6.9
04_04_0057 + 22410167-22411330 27 9.2
>03_05_0070 -
20478396-20478505,20478605-20478780,20481162-20481265,
20481346-20481504,20481718-20481857,20482222-20482311,
20482902-20482970,20484295-20484516,20486175-20486293,
20486377-20486492,20488058-20488146,20488790-20488883
Length = 495
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 93 VTLPPCKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 203
V L CK+L + DLKS+LEG+NT D++ + +
Sbjct: 260 VQLALCKELDERRHDLKSELEGYNTGDSDDINKKKAL 296
>02_03_0171 +
15945591-15945681,15947068-15947138,15947715-15947817,
15948189-15948328,15948535-15948693,15948775-15948878,
15950373-15950548,15952643-15952832,15953704-15953803,
15954171-15954339,15954908-15954990,15955073-15955149,
15955386-15955557
Length = 544
Score = 32.7 bits (71), Expect = 0.24
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +3
Query: 93 VTLPPCKDLPKVATDLKSQLEGFNTSCLRDVDTNEKI 203
V L CK+L + DLKS+LEG+NT D++ + +
Sbjct: 82 VQLALCKELDERMHDLKSELEGYNTGDSDDINKKKAL 118
>09_02_0057 -
3697255-3698116,3698191-3698351,3698442-3698636,
3698728-3699126,3699208-3699477,3700102-3700695
Length = 826
Score = 31.1 bits (67), Expect = 0.74
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 7/83 (8%)
Frame = +2
Query: 281 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGR----S*TLRQDSXEAHDDGRKESTAPD- 445
E R G G+R ESPP P + S +DS E D +E+ P
Sbjct: 60 EEESRSRRHGHHRDGGRRSLSPSESPPPPAAKRERSSSRAPRDSVERRDSADREAPPPSS 119
Query: 446 --RSYRXGXGKEQIPERHRELRS 508
R G G E PE + R+
Sbjct: 120 RKRKGHEGGGNESDPEGGKRARA 142
>03_02_1016 + 13228113-13228964
Length = 283
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +2
Query: 281 EPAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSXEAHD 415
E A AH +G + A+ +R C SG P P RS T HD
Sbjct: 214 EAARAHASNGGKHAAARR-CSSGNHQPVPRARSTTGMDSLGHGHD 257
>07_03_1577 -
27869596-27869682,27869769-27869869,27869956-27869995,
27870879-27870953
Length = 100
Score = 29.9 bits (64), Expect = 1.7
Identities = 10/25 (40%), Positives = 19/25 (76%)
Frame = +3
Query: 135 DLKSQLEGFNTSCLRDVDTNEKIVL 209
DL+S+L+ NT CL + + N+K+++
Sbjct: 54 DLQSKLDAVNTECLAEKEKNKKLII 78
>05_01_0558 -
4880811-4880996,4881098-4881178,4881247-4881393,
4881985-4882029,4882370-4883134
Length = 407
Score = 29.5 bits (63), Expect = 2.3
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 8/71 (11%)
Frame = +2
Query: 5 SQSDRVAECTNLLSP--SSSKIY*FTMACS------VSDTPSLQRPPQGRHRPEESARRL 160
S S R LLSP S+S+ F + S V PSL PP +P+E+ +
Sbjct: 61 SSSSRTPTAAGLLSPVISTSRTLIFLLVASLLSLSGVRPLPSLASPPPPTQQPQETEEQE 120
Query: 161 QHQLSP*RRHQ 193
Q Q S ++ Q
Sbjct: 121 QQQESEEKQQQ 131
>09_04_0329 +
16726501-16726750,16726843-16726930,16727280-16727333,
16727590-16727739,16727884-16728015,16728279-16728423,
16728514-16728552,16728638-16728712,16728935-16728994,
16729120-16729184,16729519-16729609,16729806-16729820
Length = 387
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = -1
Query: 375 RPRGSGGLSPLRQHLCPEAGSSPESRCASAG 283
R RG+ G+ LR L P A +SP ++ A+ G
Sbjct: 54 RRRGAHGVRALRPLLLPRASASPSAKTAAGG 84
>09_02_0479 - 9753161-9753171,9755260-9755547,9755883-9756222
Length = 212
Score = 29.1 bits (62), Expect = 3.0
Identities = 11/24 (45%), Positives = 19/24 (79%)
Frame = +1
Query: 142 RVSSKASTPAVSVTSTPMKRLCFR 213
+VSS++S+P SVT+ ++ +CFR
Sbjct: 72 QVSSQSSSPVESVTTATLRPICFR 95
>02_04_0110 - 19817506-19817847
Length = 113
Score = 29.1 bits (62), Expect = 3.0
Identities = 22/60 (36%), Positives = 27/60 (45%)
Frame = -1
Query: 474 SFPXPXR*LRSGAVDSFLPSSCASXESCRSVQLRPRGSGGLSPLRQHLCPEAGSSPESRC 295
S P R + A D PSSC S ES +LR + GG L+ PEA S + C
Sbjct: 12 SLPAVARAVSPAADDESSPSSCLSSES----ELRQQHGGGGGQLQWSDSPEATSMVLAAC 67
>01_06_0893 -
32766994-32768841,32769596-32769782,32769860-32769987,
32770080-32770283,32770373-32770523,32771424-32771533,
32772534-32772903,32773031-32773189,32773719-32773848,
32773921-32773989,32774066-32774154,32774319-32774439,
32775878-32776148
Length = 1278
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +1
Query: 37 SSIPFLIKNILIHNGLLRE*HSLPAKTSPRSPQT*RVSSKASTPAVS 177
S+ P ++K + + +G+L H++ A + +PQ RVS + P S
Sbjct: 778 SNPPQVVKTVTLPSGMLLVGHAIQAPSRSPAPQVDRVSKAIAAPTKS 824
>07_03_0735 +
21075033-21075846,21077065-21077199,21077384-21077517,
21077604-21077814,21078033-21078270,21078346-21078496,
21078593-21078931
Length = 673
Score = 28.7 bits (61), Expect = 4.0
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 198 KIVLPSAEDVATEKTXKSLFDGIEKFDSSQLKHTETQEKN 317
K VLPS E++A ++ S GIE+ + + + Q+KN
Sbjct: 361 KGVLPSGEEIAVKRLSMSSGQGIEELKNELVLVAKLQQKN 400
>11_01_0708 + 5817545-5818957
Length = 470
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -2
Query: 167 GVEAFELTLQVCGDLGEVFAGRECHSR 87
G++A L +C GE+ GRE H R
Sbjct: 205 GLQAVPSVLNICAKEGELMKGREIHGR 231
>06_03_0723 + 23875008-23875204,23875311-23875576,23877166-23877274,
23877577-23878212,23878328-23878573,23878669-23878834,
23878863-23879076,23879580-23880097,23880617-23880683,
23882131-23882215,23882292-23882367,23882593-23882756,
23883088-23883217,23883314-23883430,23883505-23883600,
23883732-23884009,23886571-23886794,23886935-23887011,
23887103-23887145,23887231-23887288,23888371-23888410,
23888891-23889418
Length = 1444
Score = 28.3 bits (60), Expect = 5.2
Identities = 28/92 (30%), Positives = 37/92 (40%)
Frame = +2
Query: 284 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSXEAHDDGRKESTAPDRSYRXG 463
P E ++DS + S + ESP S + S +HDD R+ T PD S R G
Sbjct: 1312 PGEPYQDSNKTDPSTP--VPTSESPIRDKAGSGLFKTIS--SHDDCREPLT-PDSSCRAG 1366
Query: 464 XGKEQIPERHRELRSH*AEAHGNVREEPAPHK 559
E P + +R H E P P K
Sbjct: 1367 SPLESPPRASKRIRVSSDIDHRGNNEFPPPLK 1398
>03_02_0755 +
10932897-10933010,10933446-10933577,10933666-10933750,
10934668-10934831,10934911-10935357
Length = 313
Score = 27.9 bits (59), Expect = 6.9
Identities = 17/73 (23%), Positives = 26/73 (35%), Gaps = 1/73 (1%)
Frame = +3
Query: 156 GFNTSCLRDVDTNEKIVLPSAEDVATEKTXKSLFDGIEKFDSSQLKHTETQEKNPLPDKD 335
G NT+ N + P +E + + +G+ + L P P
Sbjct: 208 GVNTAGSNSDSVNNDLPRPDSESEIVQHIVEGRTEGVSNHSRANLSRENIPRVAPTPQNP 267
Query: 336 VVAAEK-AHQNLL 371
VVA +K H LL
Sbjct: 268 VVAIQKPKHDRLL 280
>02_01_0290 - 1944550-1944958,1945235-1945335,1945459-1945719
Length = 256
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = -1
Query: 159 SLRADSSGLWRPWGGLCREGVSLTEQAIVNQYIFDEEG 46
S +++ +W W L REGV + ++A ++Q ++ G
Sbjct: 75 STHSEALDIWIQWVPLRREGVGIAKKAELHQLVYHSFG 112
>04_04_0057 + 22410167-22411330
Length = 387
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/70 (22%), Positives = 24/70 (34%)
Frame = +2
Query: 284 PAEAHRDSGEEPASGQRCCRSGESPPEPLGRS*TLRQDSXEAHDDGRKESTAPDRSYRXG 463
P A + P RC S PP P + + ++ +D RKE R
Sbjct: 187 PPPAAAAASPSPERSPRCQPSPPPPPPPHALVIPVEDEEDDSDEDDRKEEAVELEMLRSE 246
Query: 464 XGKEQIPERH 493
++P H
Sbjct: 247 RRAARLPRSH 256
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,281,203
Number of Sequences: 37544
Number of extensions: 357456
Number of successful extensions: 1269
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1267
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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