Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_K04
(624 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosi... 63 1e-10
U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical pr... 30 1.5
Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z81108-7|CAB03240.1| 465|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z81106-4|CAB03224.1| 465|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 27 8.2
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 27 8.2
>AF026213-7|AAB71308.2| 151|Caenorhabditis elegans Tetra thymosin
(four thymosin repeatprotein) protein 1 protein.
Length = 151
Score = 63.3 bits (147), Expect = 1e-10
Identities = 38/93 (40%), Positives = 51/93 (54%), Gaps = 1/93 (1%)
Frame = +3
Query: 114 DLPKVATDLKSQL-EGFNTSCLRDVDTNEKIVLPSAEDVATEKTXKSLFDGIEKFDSSQL 290
+LPK+ +L + EG L+ V+T EK VLP+ EDVA EK IE FDS++L
Sbjct: 6 ELPKMNQELAGAVREGLE---LKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKL 62
Query: 291 KHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHF 389
T +EK LP D + EK H L D + +F
Sbjct: 63 HSTPVKEKIVLPSADDIKQEKQHLELTDKINNF 95
Score = 62.9 bits (146), Expect = 2e-10
Identities = 34/72 (47%), Positives = 41/72 (56%)
Frame = +3
Query: 147 QLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTXKSLFDGIEKFDSSQLKHTETQEKNPLP 326
++E F+++ L EKIVLPSA+D+ EK L D I F S LK TET EKN LP
Sbjct: 53 EIEHFDSTKLHSTPVKEKIVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLP 112
Query: 327 DKDVVAAEKAHQ 362
VA EK Q
Sbjct: 113 SPTDVAREKTLQ 124
Score = 57.6 bits (133), Expect = 7e-09
Identities = 34/100 (34%), Positives = 43/100 (43%)
Frame = +3
Query: 285 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEHFDXXXXXXXXXXXXXXXXXXXXXXXX 464
+LK ET EKN LP K+ VA EK H + +EHFD
Sbjct: 23 ELKKVETTEKNVLPTKEDVAEEKQHVERIHEIEHFDSTKLHSTPVKEKIVLPSADDIKQE 82
Query: 465 XXXXXFLNGIENFDPTKLKHTETCEKNPLPTKDVIEQEKS 584
+ I NF LK TET EKN LP+ + +EK+
Sbjct: 83 KQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKT 122
Score = 41.5 bits (93), Expect = 5e-04
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
Frame = +3
Query: 93 VTLPPCKDLP--KVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTXKSLFDGI 266
+ LP D+ K +L ++ F + L+ +T EK VLPS DVA EKT +
Sbjct: 71 IVLPSADDIKQEKQHLELTDKINNFPSENLKKTETIEKNVLPSPTDVAREKTLQM----A 126
Query: 267 EKFDSSQLKHTET 305
FD S L H ET
Sbjct: 127 ASFDKSALHHVET 139
>U61953-3|AAC48071.3| 491|Caenorhabditis elegans Hypothetical
protein R08C7.5 protein.
Length = 491
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 10 VRQSR*VHESSIPFLIKNILIHNGLLRE*HSLPAKTSPRSPQT*RVSSKASTPAVSVTST 189
++Q V S + L + IL H +E +P+ P+ P+T SK P +
Sbjct: 264 MKQEPGVESSHVSNLRQKILNHRKRGKEVQKVPSSPPPKLPKTVVQPSKEEKPTAKTAAP 323
Query: 190 PMKRL 204
P+K L
Sbjct: 324 PVKLL 328
>Z93383-3|CAB07625.1| 309|Caenorhabditis elegans Hypothetical
protein F54B8.3 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.0
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Frame = -2
Query: 530 FRVLQLSGIEVLDAVQEFVLFLXRFDSFDRGQWILFFRR-----RVLHXSLVEVFNSVQE 366
F V+ L+ ++V A++ F ++ DR Q I +F+R LH VE++NS +
Sbjct: 99 FLVIALNDLKV--ALKHVSCFAYVDNTLDRYQNITYFKRFLKSEETLHVEEVEIWNSYVD 156
Query: 365 VLVGFLRC 342
++ LRC
Sbjct: 157 DVMTILRC 164
>Z81108-7|CAB03240.1| 465|Caenorhabditis elegans Hypothetical
protein R06C1.1 protein.
Length = 465
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +3
Query: 105 PCKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTXKSLFDGIEKFDSS 284
P + ++T S ++ F+ +RD ++ V EDV E + + +DG E
Sbjct: 377 PSVQMQSISTSCDSIVKTFDEKLIRDHQNDDVRVTQFEEDVQVEDSAE-FYDGQE----P 431
Query: 285 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEH 386
+ K+ ++ +++ P A E+ +N +DG E+
Sbjct: 432 ETKNIQSMKRHASP--ICAAQEEMKKNRIDGGEN 463
>Z81106-4|CAB03224.1| 465|Caenorhabditis elegans Hypothetical
protein R06C1.1 protein.
Length = 465
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/94 (23%), Positives = 45/94 (47%)
Frame = +3
Query: 105 PCKDLPKVATDLKSQLEGFNTSCLRDVDTNEKIVLPSAEDVATEKTXKSLFDGIEKFDSS 284
P + ++T S ++ F+ +RD ++ V EDV E + + +DG E
Sbjct: 377 PSVQMQSISTSCDSIVKTFDEKLIRDHQNDDVRVTQFEEDVQVEDSAE-FYDGQE----P 431
Query: 285 QLKHTETQEKNPLPDKDVVAAEKAHQNLLDGVEH 386
+ K+ ++ +++ P A E+ +N +DG E+
Sbjct: 432 ETKNIQSMKRHASP--ICAAQEEMKKNRIDGGEN 463
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -1
Query: 420 PSSCASXESCRS--VQLRPRGSGGLSPLRQH-LCPEAGSSPESRCASAGSNQTSRYRRIK 250
P S + + RS QL G LSP H LCP A + + SN+TS Y +
Sbjct: 348 PKSASERSAVRSGMAQLPGVGQFTLSPSAHHPLCPSADDRTTT-IRNTASNETSAYYPLS 406
Query: 249 T 247
T
Sbjct: 407 T 407
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 27.5 bits (58), Expect = 8.2
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Frame = -1
Query: 420 PSSCASXESCRS--VQLRPRGSGGLSPLRQH-LCPEAGSSPESRCASAGSNQTSRYRRIK 250
P S + + RS QL G LSP H LCP A + + SN+TS Y +
Sbjct: 348 PKSASERSAVRSGMAQLPGVGQFTLSPSAHHPLCPSADDRTTT-IRNTASNETSAYYPLS 406
Query: 249 T 247
T
Sbjct: 407 T 407
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,199,543
Number of Sequences: 27780
Number of extensions: 270849
Number of successful extensions: 998
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 995
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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