Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J24
         (476 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2; ...    34   1.4  
UniRef50_A6KYF6 Cluster: Putative uncharacterized protein; n=1; ...    32   5.7  
UniRef50_A2QI61 Cluster: Putative uncharacterized protein; n=1; ...    32   5.7  

>UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2;
           Pasteurellaceae|Rep: Putative uncharacterized protein -
           Mannheimia succiniciproducens (strain MBEL55E)
          Length = 449

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
 Frame = -2

Query: 358 LLHSIYLGLCT*ILKNYF--SGFRCFRGLQIFIKFVEAVYHRAKVFLNSLRGXRRIQLFP 185
           LL  I+LGLC   + N F  S F  F G+ +F+ F+E + +  + F+NSL     + +F 
Sbjct: 10  LLIIIFLGLCIVTIDNIFIVSDFVLF-GIFLFLLFLEVIINPKRNFINSL---VLLAVFL 65

Query: 184 SIPQLFX-SHSQPAYLGY 134
           +I  +F   HS+ +Y  Y
Sbjct: 66  NILGVFAIEHSEGSYYLY 83


>UniRef50_A6KYF6 Cluster: Putative uncharacterized protein; n=1;
           Bacteroides vulgatus ATCC 8482|Rep: Putative
           uncharacterized protein - Bacteroides vulgatus (strain
           ATCC 8482 / DSM 1447 / NCTC 11154)
          Length = 242

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 19/71 (26%), Positives = 34/71 (47%)
 Frame = -1

Query: 386 KLLFNNVENIITFDIFGVMYLDTKKLLLRLSVLPRASDFYKIR*SCLPSCQSFS*QSPGX 207
           K  FN + N    D +  +YLDTK +L+ L +       Y +      S   +  +SP  
Sbjct: 81  KKTFNLIANK-NIDDYSNVYLDTKSILVELDMAKNTPRVYLLNNGKYVSHSFYGNESPSK 139

Query: 206 KADSTFSLNSS 174
           +A++T + N++
Sbjct: 140 EANTTITFNTN 150


>UniRef50_A2QI61 Cluster: Putative uncharacterized protein; n=1;
           Aspergillus niger|Rep: Putative uncharacterized protein
           - Aspergillus niger
          Length = 100

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = +1

Query: 133 NSLNTLAESAXKTIEELREKVESALXPGDC*EKLWHDGRQL 255
           NSLN +A+S  K ++ + + V SA  PGD     W   R L
Sbjct: 37  NSLNDMAQSGVKEMKNVFDGVASAPAPGDFLNSTWEHVRSL 77


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 350,817,412
Number of Sequences: 1657284
Number of extensions: 5927234
Number of successful extensions: 15143
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14872
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15141
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)