Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J24
         (476 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    22   2.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    22   2.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    22   2.5  
U77974-1|AAB36556.1|  276|Tribolium castaneum transcription fact...    21   7.7  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   7.7  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +1

Query: 184 REKVESALXPGDC*EKLWHDGRQLQRIL*KSEARGSTESLRSNFLVSKYITPNISNVI 357
           R ++ SAL   +   K+W   R++++     E     E + ++   S   +P+ +N+I
Sbjct: 283 RIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSSTNLI 340


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +1

Query: 184 REKVESALXPGDC*EKLWHDGRQLQRIL*KSEARGSTESLRSNFLVSKYITPNISNVI 357
           R ++ SAL   +   K+W   R++++     E     E + ++   S   +P+ +N+I
Sbjct: 72  RIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSSTNLI 129


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = +1

Query: 184 REKVESALXPGDC*EKLWHDGRQLQRIL*KSEARGSTESLRSNFLVSKYITPNISNVI 357
           R ++ SAL   +   K+W   R++++     E     E + ++   S   +P+ +N+I
Sbjct: 72  RIEIASALQLNETQVKIWFQNRRMKQKKRMKEGLIPPEPISASLSTSNSNSPSSTNLI 129


>U77974-1|AAB36556.1|  276|Tribolium castaneum transcription factor
           homolog protein.
          Length = 276

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 173 LRN*GKKLNPPXAPETVKKNFG 238
           L+N G  LNPP     +  N G
Sbjct: 191 LQNPGLNLNPPVTQTQLPLNLG 212


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 7.7
 Identities = 11/37 (29%), Positives = 19/37 (51%)
 Frame = -1

Query: 392  HRKLLFNNVENIITFDIFGVMYLDTKKLLLRLSVLPR 282
            HRK +   ++ I+ FDI     ++ KK   +  V+ R
Sbjct: 1179 HRKKIVKFLDGIMAFDIQLKQVVNYKKKKFQRMVVAR 1215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,622
Number of Sequences: 336
Number of extensions: 1499
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)