Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J24
         (476 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1085 + 27491735-27492754,27492854-27492978,27493088-274932...    31   0.64 
10_08_0850 + 21050164-21050189,21050874-21050979,21051186-210512...    27   5.9  
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880...    27   5.9  
05_07_0224 + 28500745-28500978,28501933-28502332,28502416-285024...    27   7.8  

>06_03_1085 +
           27491735-27492754,27492854-27492978,27493088-27493232,
           27493328-27493591
          Length = 517

 Score = 30.7 bits (66), Expect = 0.64
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 124 KEDNSLNTLAESAXKTIEELREKVESALXPGDC*EKLWHDGR 249
           +E N L+ L +   K + ELR KVE A+  G    KL+ DG+
Sbjct: 49  EESNFLDDLKDGERKALAELRAKVEEAIVDG----KLFDDGK 86


>10_08_0850 +
           21050164-21050189,21050874-21050979,21051186-21051257,
           21051775-21051828,21052077-21052184,21052653-21052802,
           21052914-21053258,21053361-21054801,21054844-21055675,
           21057060-21057325,21057530-21059603,21060172-21060442,
           21060556-21060990
          Length = 2059

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 225 LTVSGAQGGFNFFPQFLNCFXRTLSQ 148
           L VSG  G  +F+PQ L+C   TL++
Sbjct: 4   LFVSGGLGAPDFYPQTLSCAEETLTK 29


>03_05_0825 -
           27986393-27986767,27987541-27987625,27987936-27988036,
           27988144-27988227,27988868-27988939,27989203-27989319,
           27989386-27989526,27989951-27990122,27990324-27990372,
           27990773-27990821,27991240-27991270,27991301-27991371
          Length = 448

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 121 PKEDNSLNTLAESAXKTIEELREKVE 198
           PKE ++  T+A +  KT EE+R +++
Sbjct: 91  PKESSTATTMAAATEKTAEEIRRELQ 116


>05_07_0224 +
           28500745-28500978,28501933-28502332,28502416-28502480,
           28502633-28502692,28502865-28503014,28503386-28503541,
           28503648-28503785,28503874-28503947,28504172-28504273,
           28505415-28505604,28505756-28505830
          Length = 547

 Score = 27.1 bits (57), Expect = 7.8
 Identities = 11/27 (40%), Positives = 18/27 (66%)
 Frame = +1

Query: 115 DAPKEDNSLNTLAESAXKTIEELREKV 195
           + PK+D   ++L ES  +T +E+ EKV
Sbjct: 516 EKPKQDRDEDSLTESMDETADEVSEKV 542


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,017,984
Number of Sequences: 37544
Number of extensions: 152283
Number of successful extensions: 310
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 310
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 979080328
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)