Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J21
         (605 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical ...   131   4e-31
AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical...    29   1.9  
U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in bl...    29   3.4  
U64859-8|AAC69096.1|  378|Caenorhabditis elegans Prion-like-(q/n...    29   3.4  
Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p...    28   4.5  
Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical pr...    28   4.5  
AF039046-14|AAB94214.1|  388|Caenorhabditis elegans Prion-like-(...    28   4.5  
AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in...    28   5.9  
AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in ...    28   5.9  
AF016451-4|AAB65996.1|  388|Caenorhabditis elegans Activated in ...    28   5.9  
AF016451-3|AAB66001.1|  388|Caenorhabditis elegans Prion-like-(q...    28   5.9  

>AL132902-1|CAB81996.1|  246|Caenorhabditis elegans Hypothetical
           protein Y71A12B.1 protein.
          Length = 246

 Score =  131 bits (316), Expect = 4e-31
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +3

Query: 249 RAVLTNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIVDANLSVLALVIVRKGAXEIPGL 428
           + +LTN RVRLL+ KG SCYR R++G RKRKSVRGCIVDAN+S L+LVIV+KG  EI GL
Sbjct: 65  QGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGL 124

Query: 429 TDGNVPRRLGPKRASKIRKLFNLS 500
           TD  +PR+LGPKRASKIRKLFNL+
Sbjct: 125 TDSVLPRKLGPKRASKIRKLFNLT 148



 Score =  110 bits (264), Expect = 9e-25
 Identities = 48/66 (72%), Positives = 55/66 (83%)
 Frame = +2

Query: 56  MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQG 235
           M+LN +YPATG QK FEV +E KLR+F+EKRM  EV  D LGDEWKGYV+R+ GGNDKQG
Sbjct: 1   MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60

Query: 236 FPMKQG 253
           FPMKQG
Sbjct: 61  FPMKQG 66


>AF099919-13|AAC68798.1|  636|Caenorhabditis elegans Hypothetical
           protein F40G9.1 protein.
          Length = 636

 Score = 29.5 bits (63), Expect = 1.9
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
 Frame = +2

Query: 74  YPATGCQKLFEVVDEHK---LRIFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQ 232
           Y   G  ++FE+  E K    RIF EK +   +   ++ ++     L++ G NDK+
Sbjct: 6   YLHVGLNRIFEIAKEKKNGKFRIFLEKNVKNVIFLQEIFEKSLFLCLKINGSNDKK 61


>U64859-9|AAC69090.1|  378|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 9 protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +  +  +      P  ++ C
Sbjct: 43  QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSC 88


>U64859-8|AAC69096.1|  378|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 57
           protein.
          Length = 378

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +  +  +      P  ++ C
Sbjct: 43  QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSC 88


>Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical
           protein F26D2.10 protein.
          Length = 1213

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -3

Query: 111 TTSNNFWHPVAGYETFNFMSCGSIPSNVSHEKD 13
           TT N+F + +  YETF F    SI + +S+ KD
Sbjct: 419 TTPNSFGNQIVNYETF-FFPAHSIMTRLSNVKD 450


>Z71178-8|CAA94882.1|  552|Caenorhabditis elegans Hypothetical
           protein B0024.10 protein.
          Length = 552

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 16/55 (29%), Positives = 20/55 (36%)
 Frame = +2

Query: 167 ADQLGDEWKGYVLRVAGGNDKQGFPMKQGRPDKQPCSSSDVKGPLMLQTAPRWXE 331
           AD +  +W          N       KQ RP  Q  SSS   GP      P+W +
Sbjct: 494 ADAMSADWLSLNKTFMPFNSTVNDDRKQKRPQFQSSSSSSHSGPPAKSAMPKWLQ 548


>AF039046-14|AAB94214.1|  388|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 54
           protein.
          Length = 388

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 11/46 (23%), Positives = 19/46 (41%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +  +  +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQNVQVQTTQCAPACQQSC 89


>AF016451-13|AAB66007.1|  445|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 8 protein.
          Length = 445

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>AF016451-5|AAB65995.1|  438|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 7 protein.
          Length = 438

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>AF016451-4|AAB65996.1|  388|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 6 protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


>AF016451-3|AAB66001.1|  388|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 5
           protein.
          Length = 388

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 11/46 (23%), Positives = 18/46 (39%)
 Frame = -1

Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147
           Q+T +  CQ  PV     +C C Q  +     +      P  ++ C
Sbjct: 44  QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,864,279
Number of Sequences: 27780
Number of extensions: 289210
Number of successful extensions: 750
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 750
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)