BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_J21 (605 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical ... 131 4e-31 AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical... 29 1.9 U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 29 3.4 U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 29 3.4 Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical p... 28 4.5 Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical pr... 28 4.5 AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(... 28 4.5 AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in... 28 5.9 AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in ... 28 5.9 AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in ... 28 5.9 AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q... 28 5.9 >AL132902-1|CAB81996.1| 246|Caenorhabditis elegans Hypothetical protein Y71A12B.1 protein. Length = 246 Score = 131 bits (316), Expect = 4e-31 Identities = 61/84 (72%), Positives = 72/84 (85%) Frame = +3 Query: 249 RAVLTNSRVRLLMSKGHSCYRPRRDGXRKRKSVRGCIVDANLSVLALVIVRKGAXEIPGL 428 + +LTN RVRLL+ KG SCYR R++G RKRKSVRGCIVDAN+S L+LVIV+KG EI GL Sbjct: 65 QGILTNGRVRLLLKKGQSCYRERKNGERKRKSVRGCIVDANMSALSLVIVKKGDGEIEGL 124 Query: 429 TDGNVPRRLGPKRASKIRKLFNLS 500 TD +PR+LGPKRASKIRKLFNL+ Sbjct: 125 TDSVLPRKLGPKRASKIRKLFNLT 148 Score = 110 bits (264), Expect = 9e-25 Identities = 48/66 (72%), Positives = 55/66 (83%) Frame = +2 Query: 56 MKLNVSYPATGCQKLFEVVDEHKLRIFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQG 235 M+LN +YPATG QK FEV +E KLR+F+EKRM EV D LGDEWKGYV+R+ GGNDKQG Sbjct: 1 MRLNFAYPATGLQKSFEVDEEKKLRLFFEKRMSQEVAIDALGDEWKGYVVRIGGGNDKQG 60 Query: 236 FPMKQG 253 FPMKQG Sbjct: 61 FPMKQG 66 >AF099919-13|AAC68798.1| 636|Caenorhabditis elegans Hypothetical protein F40G9.1 protein. Length = 636 Score = 29.5 bits (63), Expect = 1.9 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%) Frame = +2 Query: 74 YPATGCQKLFEVVDEHK---LRIFYEKRMGAEVXADQLGDEWKGYVLRVAGGNDKQ 232 Y G ++FE+ E K RIF EK + + ++ ++ L++ G NDK+ Sbjct: 6 YLHVGLNRIFEIAKEKKNGKFRIFLEKNVKNVIFLQEIFEKSLFLCLKINGSNDKK 61 >U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in blocked unfolded proteinresponse protein 9 protein. Length = 378 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/46 (23%), Positives = 19/46 (41%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + + P ++ C Sbjct: 43 QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSC 88 >U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 57 protein. Length = 378 Score = 28.7 bits (61), Expect = 3.4 Identities = 11/46 (23%), Positives = 19/46 (41%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + + P ++ C Sbjct: 43 QQTQSCSCQSAPVQQQAPSCSCAQPQQTQTVQVQSTQCAPACQQSC 88 >Z81513-13|CAB04180.2| 1213|Caenorhabditis elegans Hypothetical protein F26D2.10 protein. Length = 1213 Score = 28.3 bits (60), Expect = 4.5 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = -3 Query: 111 TTSNNFWHPVAGYETFNFMSCGSIPSNVSHEKD 13 TT N+F + + YETF F SI + +S+ KD Sbjct: 419 TTPNSFGNQIVNYETF-FFPAHSIMTRLSNVKD 450 >Z71178-8|CAA94882.1| 552|Caenorhabditis elegans Hypothetical protein B0024.10 protein. Length = 552 Score = 28.3 bits (60), Expect = 4.5 Identities = 16/55 (29%), Positives = 20/55 (36%) Frame = +2 Query: 167 ADQLGDEWKGYVLRVAGGNDKQGFPMKQGRPDKQPCSSSDVKGPLMLQTAPRWXE 331 AD + +W N KQ RP Q SSS GP P+W + Sbjct: 494 ADAMSADWLSLNKTFMPFNSTVNDDRKQKRPQFQSSSSSSHSGPPAKSAMPKWLQ 548 >AF039046-14|AAB94214.1| 388|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 54 protein. Length = 388 Score = 28.3 bits (60), Expect = 4.5 Identities = 11/46 (23%), Positives = 19/46 (41%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + + P ++ C Sbjct: 44 QQTQSCSCQSAPVQQQSPSCSCAQPQQTQNVQVQTTQCAPACQQSC 89 >AF016451-13|AAB66007.1| 445|Caenorhabditis elegans Activated in blocked unfolded proteinresponse protein 8 protein. Length = 445 Score = 27.9 bits (59), Expect = 5.9 Identities = 11/46 (23%), Positives = 18/46 (39%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + P ++ C Sbjct: 44 QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89 >AF016451-5|AAB65995.1| 438|Caenorhabditis elegans Activated in blocked unfolded proteinresponse protein 7 protein. Length = 438 Score = 27.9 bits (59), Expect = 5.9 Identities = 11/46 (23%), Positives = 18/46 (39%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + P ++ C Sbjct: 44 QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89 >AF016451-4|AAB65996.1| 388|Caenorhabditis elegans Activated in blocked unfolded proteinresponse protein 6 protein. Length = 388 Score = 27.9 bits (59), Expect = 5.9 Identities = 11/46 (23%), Positives = 18/46 (39%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + P ++ C Sbjct: 44 QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89 >AF016451-3|AAB66001.1| 388|Caenorhabditis elegans Prion-like-(q/n-rich)-domain-bearingprotein protein 5 protein. Length = 388 Score = 27.9 bits (59), Expect = 5.9 Identities = 11/46 (23%), Positives = 18/46 (39%) Frame = -1 Query: 284 QKTNTAVCQDGPVSSGILACRCRQRHEVHSPSIHRLTDQPXLRRPC 147 Q+T + CQ PV +C C Q + + P ++ C Sbjct: 44 QQTQSCSCQSAPVQQQSPSCSCAQPQQTQQVQVQSTQCAPACQQSC 89 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,864,279 Number of Sequences: 27780 Number of extensions: 289210 Number of successful extensions: 750 Number of sequences better than 10.0: 11 Number of HSP's better than 10.0 without gapping: 713 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 750 length of database: 12,740,198 effective HSP length: 78 effective length of database: 10,573,358 effective search space used: 1300523034 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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