Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J15
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    24   1.2  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    23   2.2  
L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    23   2.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    23   2.9  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   2.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   8.8  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 12/36 (33%), Positives = 16/36 (44%)
 Frame = +2

Query: 5   GYFLLPVQVDKEKKRRPYFYQNKLGIFFSRTKCSYY 112
           G  LLP+Q  +    +PY      GIF     C+ Y
Sbjct: 540 GNELLPMQQSQNPPTKPYGTCRSEGIFSDPKNCAAY 575


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = -1

Query: 644 NFXENYTVCQLNCF*ITELLNFLS 573
           +F ENY     NCF  T LL  LS
Sbjct: 136 SFIENYCQFLYNCFHSTLLLMILS 159


>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 230 HCLRQALSASVIPRHLSLSLATRP 159
           HC RQ +  + + RHL +    RP
Sbjct: 42  HCDRQFVQVANLRRHLRVHTGERP 65


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 251 PLTSQFTWXNIGXSVLILFVVFTGNPWT 334
           P    +T+  +  SVL+ F+ +  N WT
Sbjct: 46  PYLKSYTYIKLVVSVLMDFIAYFFNFWT 73


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 2.9
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = -1

Query: 230 HCLRQALSASVIPRHLSLSLATRP 159
           HC RQ +  + + RHL +    RP
Sbjct: 195 HCDRQFVQVANLRRHLRVHTGERP 218


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/23 (30%), Positives = 12/23 (52%)
 Frame = +2

Query: 293 VLILFVVFTGNPWTYSLRNLPQC 361
           V+++   +    WT  L+NL  C
Sbjct: 82  VIVVTTFYKRRTWTRLLKNLESC 104


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,075
Number of Sequences: 336
Number of extensions: 3412
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)