Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J15
         (650 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_05_0081 - 18924353-18924462,18925068-18925187,18925569-189260...    31   0.60 
10_07_0176 - 13826764-13827064,13827271-13827377,13827474-138278...    29   3.2  
01_06_1258 + 35806557-35806932,35807517-35807679,35807789-358078...    29   3.2  
08_02_1260 - 25680618-25680677,25680763-25680893,25681085-256811...    28   7.4  
02_03_0360 + 18104948-18106159                                         28   7.4  

>11_05_0081 -
           18924353-18924462,18925068-18925187,18925569-18926086,
           18927392-18927471,18927680-18927782,18928084-18928295,
           18928392-18929210,18929331-18929444,18929935-18929983,
           18930115-18930271,18930354-18930807,18930938-18931147
          Length = 981

 Score = 31.5 bits (68), Expect = 0.60
 Identities = 15/36 (41%), Positives = 19/36 (52%)
 Frame = +1

Query: 412 LIAVAMLSTHYYFKYLXNDWTKKGGWKVLKTKPMVL 519
           +I  A+L  H Y+ +L  DW KK  W  L   PM L
Sbjct: 578 VIVYALLIVHGYYLFLTKDWYKKTTWMYLAV-PMFL 612


>10_07_0176 - 13826764-13827064,13827271-13827377,13827474-13827836,
            13827912-13828079,13828153-13828374,13828784-13829023,
            13829640-13829719,13829853-13830018,13830720-13830783,
            13830861-13830962,13831085-13831227,13831370-13831474,
            13831551-13831706,13832125-13832241,13832315-13832392,
            13832466-13832550,13833334-13833455,13833546-13833611,
            13835190-13835284,13835427-13835523,13835873-13835983,
            13836083-13836164,13836292-13836353,13836620-13836685,
            13838002-13838232
          Length = 1142

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -2

Query: 133  LFVPFFRIIATLGSREKNA*FVLIKIRSSFFFFVNL 26
            +F+  +  I T   R++N  FV+  + S+FFF++ L
Sbjct: 992  MFIFIYSAIMTSFDRQENVYFVIYVLMSTFFFYLTL 1027


>01_06_1258 +
           35806557-35806932,35807517-35807679,35807789-35807837,
           35807943-35808866,35808954-35809049,35809142-35809257,
           35809345-35809447,35809570-35809658,35809750-35809900,
           35809995-35810141,35810238-35810366,35810451-35810529,
           35810616-35810725
          Length = 843

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = +1

Query: 412 LIAVAMLSTHYYFKYLXNDWTKKGGWKVL 498
           ++A  +L  H YF +L  +W KK  W  L
Sbjct: 481 VLAYVLLVVHSYFIFLTREWYKKTTWMYL 509


>08_02_1260 -
           25680618-25680677,25680763-25680893,25681085-25681163,
           25681250-25681280,25681358-25681410,25681441-25681511,
           25681610-25681678,25681776-25681889,25683101-25683293
          Length = 266

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 20/81 (24%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +1

Query: 157 VGRVASERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEXYWXERTNPIRRFYRK-PLD 333
           V R+  ++   + +T  + ++R + LKD  L   + +HV   W     P     +  PLD
Sbjct: 165 VNRILKDKGVYILITYGDPSYRLRLLKDLQLWTVK-LHVIDRWERSREPSWELTKPLPLD 223

Query: 334 VLFAKLTPMLGEQRAAHYXYI 396
                +  +LG +   HY Y+
Sbjct: 224 GDSTSIVSLLGPKPDVHYIYV 244


>02_03_0360 + 18104948-18106159
          Length = 403

 Score = 27.9 bits (59), Expect = 7.4
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = +1

Query: 172 SERERCLGMTDAERAWRKQWLKDQVLAAHEPVHVEXYWXE 291
           SER + L   DAER    + L++Q+LA H  V V   W +
Sbjct: 363 SERSKDLDEEDAERYEAIKNLREQMLAGHGFVLVSQEWGQ 402


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,494,292
Number of Sequences: 37544
Number of extensions: 328175
Number of successful extensions: 729
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 729
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)