Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J15
         (650 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_45117| Best HMM Match : Band_41 (HMM E-Value=7.4e-26)               28   5.7  
SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)               28   7.6  

>SB_45117| Best HMM Match : Band_41 (HMM E-Value=7.4e-26)
          Length = 458

 Score = 28.3 bits (60), Expect = 5.7
 Identities = 14/36 (38%), Positives = 19/36 (52%)
 Frame = +2

Query: 5   GYFLLPVQVDKEKKRRPYFYQNKLGIFFSRTKCSYY 112
           G FL PV +D++     YF Q KLG + S+     Y
Sbjct: 178 GKFLKPVSIDQQAVLDSYFAQLKLGDYDSKKNSKGY 213


>SB_8470| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 3133

 Score = 27.9 bits (59), Expect = 7.6
 Identities = 12/40 (30%), Positives = 17/40 (42%)
 Frame = +3

Query: 303  YSSFLPETLGRTLCETYPNAGRTTCCTLXIYIWKTWFNRC 422
            + S   + + R L E  P  G+TT C   +  W     RC
Sbjct: 978  FKSKTKKRMKRVLLEGNPGVGKTTLCKKLVNSWALGVQRC 1017


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,768,798
Number of Sequences: 59808
Number of extensions: 407371
Number of successful extensions: 857
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 815
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 857
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1657237625
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)