Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J10
         (653 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_06_0116 + 31773295-31773603,31773800-31773946,31774080-317741...    29   3.2  
02_04_0543 + 23766089-23766328,23766976-23767212,23767601-23767876     28   7.5  
01_05_0735 - 24749975-24750601,24751411-24751541,24752150-247523...    28   7.5  
11_03_0142 + 10675764-10675991,10676533-10676943                       27   9.9  
02_05_0118 - 25991356-25991686,25991797-25992092,25992405-259931...    27   9.9  
02_05_0113 - 25941189-25941519,25941630-25941925,25942238-259429...    27   9.9  

>03_06_0116 +
           31773295-31773603,31773800-31773946,31774080-31774158,
           31777558-31778180
          Length = 385

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +3

Query: 378 AFSQRLTKAPGPKLGMVALQSLWRLYNNLQPNSPLRYHVY 497
           AFS+R  K   PK   + L   W L+ +  P   +R H+Y
Sbjct: 227 AFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSVRTHIY 266


>02_04_0543 + 23766089-23766328,23766976-23767212,23767601-23767876
          Length = 250

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 13/34 (38%), Positives = 20/34 (58%)
 Frame = +3

Query: 270 DACFKEPSESDIEAILNSIVSIMVSIPLXRGENL 371
           D  FKE  +  ++ IL ++  I+V I + RGE L
Sbjct: 136 DESFKESLDELVQVILATVAFILVYIHIIRGEEL 169


>01_05_0735 -
           24749975-24750601,24751411-24751541,24752150-24752336,
           24753801-24753898,24754182-24754689
          Length = 516

 Score = 27.9 bits (59), Expect = 7.5
 Identities = 12/41 (29%), Positives = 25/41 (60%)
 Frame = +3

Query: 423 MVALQSLWRLYNNLQPNSPLRYHVYYHVIXLAARVGFVREV 545
           ++A   L  +Y +L PN PL+  +Y+ +I +A  + F+ ++
Sbjct: 195 LLAADCLEIMYTSLSPNGPLK--LYHFIIIVAVALAFLSQL 233


>11_03_0142 + 10675764-10675991,10676533-10676943
          Length = 212

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 141 INTAGPCILIPFLNCILLFIIYKH*SECKN 52
           + + GP + +P +NC LL ++ K    C N
Sbjct: 147 VGSLGPMVAVPCVNCHLLVMLCKSSPACPN 176


>02_05_0118 -
           25991356-25991686,25991797-25992092,25992405-25993109,
           25993197-25993298,25993519-25993846,25994337-25994461,
           25994555-25994628,25995110-25995191,25995278-25995391,
           25995475-25995575,25995663-25995752,25996316-25996562
          Length = 864

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -2

Query: 322 LFRMASMSDSLGSLKQASQTPTILCRSSSMPLGDFXSEISAPRLVKISSQ 173
           L R  SMS  + + K A    ++ C +    +G+F +E+     V    Q
Sbjct: 603 LSRAGSMSSEISTFKDAKTNGSVACDTEFTGIGEFVAELKEMAQVHYQKQ 652


>02_05_0113 -
           25941189-25941519,25941630-25941925,25942238-25942942,
           25943030-25943131,25943352-25943679,25944170-25944294,
           25944388-25944453,25945046-25945109,25945739-25945821,
           25945917-25945943
          Length = 708

 Score = 27.5 bits (58), Expect = 9.9
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -2

Query: 322 LFRMASMSDSLGSLKQASQTPTILCRSSSMPLGDFXSEISAPRLVKISSQ 173
           L R  SMS  + + K A    ++ C +    +G+F +E+     V    Q
Sbjct: 447 LSRAGSMSSEISTFKDAKTNGSVACDTEFTGIGEFVAELKEMAQVHYQKQ 496


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,333,157
Number of Sequences: 37544
Number of extensions: 273498
Number of successful extensions: 603
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 596
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 603
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1632177336
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)