Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J10
         (653 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p pro...   224   7e-59
AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA...   224   7e-59
AF252287-1|AAF98331.1|  694|Drosophila melanogaster MIND-MELD pr...    29   7.3  
AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB...    29   7.3  
AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA...    29   7.3  
AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-P...    29   7.3  

>AY118924-1|AAM50784.1|  387|Drosophila melanogaster LD23767p
           protein.
          Length = 387

 Score =  224 bits (548), Expect = 7e-59
 Identities = 102/153 (66%), Positives = 123/153 (80%)
 Frame = +3

Query: 195 LGAEISEXKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIMVSIPLXRGENLI 374
           LGAEIS  KS KG+EDDLHKI+GVCD CFK+   S I+ ILNSIVSIM++IPL RGEN++
Sbjct: 26  LGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDGILNSIVSIMITIPLDRGENIV 85

Query: 375 LAFSQRLTKAPGPKLGMVALQSLWRLYNNLQPNSPLRYHVYYHVIXLAARVGFVREVFTG 554
           LA+ +++TKAP   LG V LQSLWRL+NNL   SPLRYHVYYH++ +A +   V EVF+G
Sbjct: 86  LAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFSG 145

Query: 555 VEQLXKEFANCPPSNEQMQKLYRLLHQVLKDQN 653
           V+QL  +FANCPPS+EQMQKLYRLLH V KD N
Sbjct: 146 VDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTN 178



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 119 MQGPAVFMDISLEDQALELRRYFNE 193
           M    VF+D+SL++Q  ELR+YF +
Sbjct: 1   MTSHPVFIDLSLDEQVQELRKYFKK 25


>AE013599-1830|AAF58289.1|  387|Drosophila melanogaster CG8309-PA
           protein.
          Length = 387

 Score =  224 bits (548), Expect = 7e-59
 Identities = 102/153 (66%), Positives = 123/153 (80%)
 Frame = +3

Query: 195 LGAEISEXKSPKGIEDDLHKIVGVCDACFKEPSESDIEAILNSIVSIMVSIPLXRGENLI 374
           LGAEIS  KS KG+EDDLHKI+GVCD CFK+   S I+ ILNSIVSIM++IPL RGEN++
Sbjct: 26  LGAEISSEKSNKGVEDDLHKIIGVCDVCFKDGEPSQIDGILNSIVSIMITIPLDRGENIV 85

Query: 375 LAFSQRLTKAPGPKLGMVALQSLWRLYNNLQPNSPLRYHVYYHVIXLAARVGFVREVFTG 554
           LA+ +++TKAP   LG V LQSLWRL+NNL   SPLRYHVYYH++ +A +   V EVF+G
Sbjct: 86  LAYCEKMTKAPNLPLGKVCLQSLWRLFNNLDTASPLRYHVYYHLVQVAKQCEQVLEVFSG 145

Query: 555 VEQLXKEFANCPPSNEQMQKLYRLLHQVLKDQN 653
           V+QL  +FANCPPS+EQMQKLYRLLH V KD N
Sbjct: 146 VDQLKSQFANCPPSSEQMQKLYRLLHDVTKDTN 178



 Score = 30.3 bits (65), Expect = 2.4
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = +2

Query: 119 MQGPAVFMDISLEDQALELRRYFNE 193
           M    VF+D+SL++Q  ELR+YF +
Sbjct: 1   MTSHPVFIDLSLDEQVQELRKYFKK 25


>AF252287-1|AAF98331.1|  694|Drosophila melanogaster MIND-MELD
           protein.
          Length = 694

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 268 QTPTILCRSSS-MPLGDFXSEISAPRLVKISSQ-FECLIFQGYVHKHSWPLH 119
           Q  T+ C+     P+ D   ++ +  ++ I  Q FEC    G V  +S+P H
Sbjct: 496 QCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEH 547


>AE014298-2299|AAS65376.1|  783|Drosophila melanogaster CG9163-PB,
           isoform B protein.
          Length = 783

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 268 QTPTILCRSSS-MPLGDFXSEISAPRLVKISSQ-FECLIFQGYVHKHSWPLH 119
           Q  T+ C+     P+ D   ++ +  ++ I  Q FEC    G V  +S+P H
Sbjct: 585 QCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEH 636


>AE014298-2298|AAF48548.3|  840|Drosophila melanogaster CG9163-PA,
           isoform A protein.
          Length = 840

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
 Frame = -2

Query: 268 QTPTILCRSSS-MPLGDFXSEISAPRLVKISSQ-FECLIFQGYVHKHSWPLH 119
           Q  T+ C+     P+ D   ++ +  ++ I  Q FEC    G V  +S+P H
Sbjct: 585 QCGTLQCKDGERQPVNDGIDQLYSRTIISIKGQEFECKATSGQVGSNSYPEH 636


>AE014297-3720|ABC66189.2| 1519|Drosophila melanogaster CG34027-PA
           protein.
          Length = 1519

 Score = 28.7 bits (61), Expect = 7.3
 Identities = 15/41 (36%), Positives = 24/41 (58%)
 Frame = +3

Query: 168 SN*EDILTSLGAEISEXKSPKGIEDDLHKIVGVCDACFKEP 290
           +N +DI T+L  E ++   P+ IE  L+K+   C+   KEP
Sbjct: 248 NNADDIDTTLSQEDTKNYEPQTIEAKLNKLYSNCENPEKEP 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,066,120
Number of Sequences: 53049
Number of extensions: 479448
Number of successful extensions: 1100
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2786177250
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)