Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_J08
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical ...    31   0.71 
U80033-1|AAM15607.1|  381|Caenorhabditis elegans Synaptotagmin p...    30   1.2  
AF003139-10|AAB54160.3|  294|Caenorhabditis elegans Hypothetical...    30   1.2  
AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical ...    30   1.6  
U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical pr...    29   3.8  
AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical ...    29   3.8  
Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical pr...    28   5.0  
AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical...    28   5.0  

>AC024843-9|AAF60836.1|  263|Caenorhabditis elegans Hypothetical
           protein Y61A9LA.9 protein.
          Length = 263

 Score = 31.1 bits (67), Expect = 0.71
 Identities = 17/53 (32%), Positives = 25/53 (47%)
 Frame = -2

Query: 407 ASPSRPAEIMPLSQRTQKPRYSPPLRIPGLSISTLSGLVXFFLMTLLAFPQPP 249
           A+PS P  I     +T+KP  S P +I   S +  +  +  F  TL + P  P
Sbjct: 186 ANPSLPVHIQTFRVKTRKPVLSRPTKIRFSSEADRNSFIFSFSKTLRSLPDRP 238


>U80033-1|AAM15607.1|  381|Caenorhabditis elegans Synaptotagmin
           protein 4 protein.
          Length = 381

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 2/92 (2%)
 Frame = +2

Query: 353 VFGFVGIAALSPLDA--RVKLFHSYLGLIPNLSQFTTSESAQAGVPQAPGKSKMERNSIL 526
           V G VG+AAL  + A   V+    Y  L+    Q     + + G P+ PG  K +  S L
Sbjct: 21  VGGAVGLAALVAVAALLAVRKRRQYPSLLLPPRQVI---AVRGGFPKGPGGLK-QSPSPL 76

Query: 527 RTXXSISLDLSPLVLWNSITADRTTAMFPSQL 622
           ++  S     SP+V   ++  DRT  + PS+L
Sbjct: 77  QSPLSNDSTPSPVVPLQNLLEDRTRKLSPSEL 108


>AF003139-10|AAB54160.3|  294|Caenorhabditis elegans Hypothetical
           protein F53G12.4 protein.
          Length = 294

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 5/95 (5%)
 Frame = +1

Query: 124 FNTNSSPLSSGSVQFKVRAANDAHIALTTGPQESD-PMYEVMIGGWGNAKSVI----RKN 288
           FN +  PLS G      ++A    I    G    D  + +    G    KS++    +K 
Sbjct: 195 FNAHLPPLSMGRPPL-TKSAKSREIDAIFGSDNVDYDLEDFEQDGVAKKKSILPMEKKKE 253

Query: 289 XTKPDKVEIESPGILNGGEYRGFWVRWDSGIISAG 393
             KP + E+  P +L+ GE       +D+G++S+G
Sbjct: 254 EAKPKEQELVEPLVLSEGESIDELEDFDTGLLSSG 288


>AF047655-5|AAC04399.1|  820|Caenorhabditis elegans Hypothetical
           protein C17B7.5 protein.
          Length = 820

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 16/65 (24%), Positives = 33/65 (50%)
 Frame = +3

Query: 93  NVMDVATDDNLQYQFFPAFKWISSVQSQSSE*CPHRAHDRPARIGSYV*GDDWRLGKR*E 272
           N MD+ T+ +LQ++  P  K+   ++  ++    H    +   +GS+     WRL +R E
Sbjct: 388 NCMDIPTNGSLQFEKPPFDKFFIGIKMLNNMTTNHTNLPKIDNVGSFNVNGHWRLIRRRE 447

Query: 273 RHQEK 287
           + + +
Sbjct: 448 KFERQ 452


>U00040-4|AAM22034.1| 1139|Caenorhabditis elegans Hypothetical protein
            C18H2.5 protein.
          Length = 1139

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 14/27 (51%), Positives = 17/27 (62%)
 Frame = +3

Query: 102  DVATDDNLQYQFFPAFKWISSVQSQSS 182
            D +TDD L  QF   FK I+S + QSS
Sbjct: 921  DKSTDDKLTNQFMEVFKSIASNEPQSS 947


>AF016663-3|AAC70878.1| 1170|Caenorhabditis elegans Hypothetical
           protein F21E9.1 protein.
          Length = 1170

 Score = 28.7 bits (61), Expect = 3.8
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = -1

Query: 411 NSFTLASSGDNAAIPTNPKTTIFPSVKNSGAFNFNLIGLGXIFPDDALSVSPASNHHLIH 232
           +S  L+S   N +  + P+T+    +  S +F+F+L       P  +L +SP  ++H+IH
Sbjct: 261 SSLLLSSINSNLSHNSIPQTSP-KRISQSSSFSFSL-------PPSSLPLSPKIDNHVIH 312

Query: 231 RIR 223
           +I+
Sbjct: 313 KIK 315


>Z68215-2|CAA92451.2|  452|Caenorhabditis elegans Hypothetical
           protein C53B4.2 protein.
          Length = 452

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 14/31 (45%), Positives = 19/31 (61%)
 Frame = +2

Query: 371 IAALSPLDARVKLFHSYLGLIPNLSQFTTSE 463
           I A SPLD + K+F   +   P LS++TT E
Sbjct: 189 IKATSPLDDKSKMFMDRIVKKPYLSKYTTKE 219


>AF016427-10|AAB65348.1|  301|Caenorhabditis elegans Hypothetical
           protein F32D1.7 protein.
          Length = 301

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = -2

Query: 446 GKGSGSDQDMNGIASPSRPAEIMPLSQRTQKPRYSP 339
           G GSGS  D +G + P+R +  +P +     PR  P
Sbjct: 159 GSGSGSGNDSSGSSGPTRMSGQVPSTSGPPPPRPPP 194


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,768,717
Number of Sequences: 27780
Number of extensions: 321093
Number of successful extensions: 872
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 872
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)