Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_J06
(584 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellu... 114 2e-24
UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellul... 103 4e-21
UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4... 95 8e-19
UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Ze... 85 9e-16
UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellu... 85 2e-15
UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17; Archa... 79 8e-14
UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1; ... 74 2e-12
UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4; ce... 56 5e-07
UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondr... 54 2e-06
UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=... 51 2e-05
UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN full... 49 7e-05
UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1; ... 49 7e-05
UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2; Bilateria|... 46 7e-04
UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondria... 46 7e-04
UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S riboso... 45 0.001
UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8; Euteleostomi|... 44 0.004
UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Re... 41 0.025
UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6; Sacchar... 40 0.033
UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellul... 40 0.057
UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2; ... 39 0.100
UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit... 38 0.17
UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondria... 38 0.17
UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondria... 36 0.70
UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12; ... 36 0.70
UniRef50_A6SKP5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.2
UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2; D... 33 5.0
UniRef50_Q2ILV7 Cluster: Putative uncharacterized protein precur... 33 6.6
UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella ve... 33 6.6
UniRef50_Q26DY4 Cluster: Putative uncharacterized protein; n=2; ... 32 8.7
UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1; ... 32 8.7
UniRef50_A6LJY1 Cluster: Glycosyl transferase, group 1; n=1; The... 32 8.7
UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n... 32 8.7
>UniRef50_P62266 Cluster: 40S ribosomal protein S23; n=141; cellular
organisms|Rep: 40S ribosomal protein S23 - Homo sapiens
(Human)
Length = 143
Score = 114 bits (274), Expect = 2e-24
Identities = 54/61 (88%), Positives = 56/61 (91%)
Frame = +2
Query: 125 KNSTKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAF 304
K KAH+GT KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKK+TAF
Sbjct: 25 KQYKKAHLGTALKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKITAF 84
Query: 305 V 307
V
Sbjct: 85 V 85
Score = 109 bits (262), Expect = 5e-23
Identities = 52/58 (89%), Positives = 52/58 (89%)
Frame = +3
Query: 309 PXDGCLNHIEXNDEXLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPXS 482
P DGCLN IE NDE LVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYK KKERP S
Sbjct: 86 PNDGCLNFIEENDEVLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKGKKERPRS 143
>UniRef50_P32827 Cluster: 40S ribosomal protein S23; n=66; cellular
organisms|Rep: 40S ribosomal protein S23 - Saccharomyces
cerevisiae (Baker's yeast)
Length = 145
Score = 103 bits (246), Expect = 4e-21
Identities = 48/67 (71%), Positives = 57/67 (85%)
Frame = +2
Query: 107 NSDGRTKNSTKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNG 286
N+ N K +GT +K++PFGG+SHAKGIVLEK+G+E+KQPNSAIRKCVRVQLIKNG
Sbjct: 21 NNRWAENNYKKRLLGTAFKSSPFGGSSHAKGIVLEKLGIESKQPNSAIRKCVRVQLIKNG 80
Query: 287 KKVTAFV 307
KKVTAFV
Sbjct: 81 KKVTAFV 87
Score = 96.7 bits (230), Expect = 4e-19
Identities = 44/58 (75%), Positives = 50/58 (86%)
Frame = +3
Query: 309 PXDGCLNHIEXNDEXLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPXS 482
P DGCLN ++ NDE L+AGFGRKG A GDIPGVRFKVVKV+ VSLLAL+KEKKE+P S
Sbjct: 88 PNDGCLNFVDENDEVLLAGFGRKGKAKGDIPGVRFKVVKVSGVSLLALWKEKKEKPRS 145
>UniRef50_Q8S6I4 Cluster: Putative 40s ribosomal protein S23; n=4;
Oryza sativa|Rep: Putative 40s ribosomal protein S23 -
Oryza sativa (Rice)
Length = 301
Score = 95.5 bits (227), Expect = 8e-19
Identities = 42/57 (73%), Positives = 49/57 (85%)
Frame = +2
Query: 137 KAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
K+H G +WK PF G+SHAKGIVLEK+G+EAKQPNSAI KC RVQL+KNGKK+ AFV
Sbjct: 100 KSHFGNEWK-KPFAGSSHAKGIVLEKIGIEAKQPNSAICKCARVQLVKNGKKIAAFV 155
>UniRef50_Q8H6J0 Cluster: Putative 40S ribosomal protein; n=1; Zea
mays|Rep: Putative 40S ribosomal protein - Zea mays
(Maize)
Length = 309
Score = 85.4 bits (202), Expect = 9e-16
Identities = 39/46 (84%), Positives = 43/46 (93%)
Frame = +3
Query: 345 DEXLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPXS 482
DE L+AGFGRKGHAVGDIPGVRFKVVKV+ VSLLAL+KEKKE+P S
Sbjct: 224 DEVLIAGFGRKGHAVGDIPGVRFKVVKVSGVSLLALFKEKKEKPRS 269
>UniRef50_Q0W8G5 Cluster: 30S ribosomal protein S12P; n=20; cellular
organisms|Rep: 30S ribosomal protein S12P - Uncultured
methanogenic archaeon RC-I
Length = 142
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/48 (79%), Positives = 44/48 (91%)
Frame = +2
Query: 161 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAF 304
KA+P GA AKGIVLEKVGVEAKQPNSAIRKC+R+QLIKNG+++TAF
Sbjct: 35 KADPLEGAPQAKGIVLEKVGVEAKQPNSAIRKCIRIQLIKNGRQITAF 82
Score = 57.2 bits (132), Expect = 3e-07
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Frame = +3
Query: 309 PXDGCLNHIEXNDEXLVAGFG-RKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 476
P DG +N I+ +DE + G G R G + GDIPGVRF+V KV +VSL + K+++P
Sbjct: 84 PGDGAINFIDEHDEVTIEGIGGRMGGSYGDIPGVRFRVFKVNDVSLEEMVAGKRDKP 140
>UniRef50_Q8ZYQ4 Cluster: 30S ribosomal protein S12P; n=17;
Archaea|Rep: 30S ribosomal protein S12P - Pyrobaculum
aerophilum
Length = 147
Score = 79.0 bits (186), Expect = 8e-14
Identities = 37/54 (68%), Positives = 45/54 (83%)
Frame = +2
Query: 146 MGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
+G K +P GA A+GIVLEKVGVEA++PN+A+RKCVRVQL+KNGK VTAFV
Sbjct: 35 LGLVEKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVRVQLVKNGKVVTAFV 88
Score = 63.7 bits (148), Expect = 3e-09
Identities = 29/57 (50%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Frame = +3
Query: 309 PXDGCLNHIEXNDEXLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 476
P DG LN+I +DE ++ G +G ++GDIPGVRFKV+KV VSL A+++ KK++P
Sbjct: 89 PLDGSLNYINEHDEVVIERIGGPEGRSLGDIPGVRFKVIKVNGVSLWAIWRGKKQKP 145
>UniRef50_Q5AAQ9 Cluster: Putative uncharacterized protein; n=1;
Candida albicans|Rep: Putative uncharacterized protein -
Candida albicans (Yeast)
Length = 102
Score = 74.1 bits (174), Expect = 2e-12
Identities = 40/87 (45%), Positives = 48/87 (55%)
Frame = -2
Query: 490 YTYDXGRSFFSL*RARRDTLATFTTLKRTPGMSPTA*PLRPNPATSXSSFXSMWFRQPSX 311
Y YD G SFFS +A ++T T TTL TPG+SP A PL P PA SSF S F+QPS
Sbjct: 3 YIYDLGFSFFSFHKANKETPETLTTLNLTPGISPLALPLLPKPANKTSSFSSTKFKQPSF 62
Query: 310 GDECGHFLSVLNELYTDAFADGRVGLL 230
G + FL L + F+ G L
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCL 89
Score = 55.6 bits (128), Expect = 8e-07
Identities = 24/40 (60%), Positives = 29/40 (72%)
Frame = -3
Query: 309 GTNAVTFFPFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 190
GT AVTF PFL++ T TH +AE GCL S P FS+T+P A
Sbjct: 63 GTKAVTFLPFLINWTSTHFSIAEFGCLDSIPIFSKTIPLA 102
>UniRef50_A3H7W0 Cluster: Protein splicing (Intein) site; n=4;
cellular organisms|Rep: Protein splicing (Intein) site -
Caldivirga maquilingensis IC-167
Length = 661
Score = 56.4 bits (130), Expect = 5e-07
Identities = 29/57 (50%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Frame = +3
Query: 309 PXDGCLNHIEXNDEXLVAGFGR-KGHAVGDIPGVRFKVVKVANVSLLALYKEKKERP 476
P DG LN I +DE ++ G +G A GD+PGVRFKV KV VSL A+ KK++P
Sbjct: 603 PWDGGLNLINEHDEVIIERIGGPEGRAYGDLPGVRFKVTKVNGVSLKAILLGKKQKP 659
Score = 53.6 bits (123), Expect = 3e-06
Identities = 26/49 (53%), Positives = 34/49 (69%)
Frame = +2
Query: 137 KAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKN 283
K +G K +P GA A+GIVLEKVGVEA++PN+A+RKCV + N
Sbjct: 32 KRALGFIKKYDPLEGAPMARGIVLEKVGVEARKPNAAVRKCVTPDTLIN 80
Score = 33.5 bits (73), Expect = 3.8
Identities = 15/17 (88%), Positives = 15/17 (88%)
Frame = +2
Query: 257 CVRVQLIKNGKKVTAFV 307
CVRVQL KNGK VTAFV
Sbjct: 586 CVRVQLTKNGKVVTAFV 602
>UniRef50_UPI00015B40B9 Cluster: PREDICTED: similar to mitochondrial
ribosomal protein S12; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to mitochondrial ribosomal protein
S12 - Nasonia vitripennis
Length = 173
Score = 54.4 bits (125), Expect = 2e-06
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = +2
Query: 167 NPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
NPF GA AKG+VL+ + + K+PNSA RKCV V+L NGK++TA++
Sbjct: 83 NPFNGAPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMTAYI 128
>UniRef50_Q1HPJ4 Cluster: Mitochondrial ribosomal protein S12; n=3;
Coelomata|Rep: Mitochondrial ribosomal protein S12 -
Bombyx mori (Silk moth)
Length = 111
Score = 51.2 bits (117), Expect = 2e-05
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 134 TKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
T H+ + NP G AKG+VL+ V + K+PNSA RKCV V+L NGK++ A++
Sbjct: 10 TGPHIKKRKSRNPLNGNPFAKGVVLKTVIKKPKKPNSANRKCVLVRL-SNGKEMVAYI 66
>UniRef50_Q8BGG2 Cluster: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence; n=8;
Euarchontoglires|Rep: Adult male spinal cord cDNA, RIKEN
full-length enriched library, clone:A330001L23
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 154
Score = 49.2 bits (112), Expect = 7e-05
Identities = 26/68 (38%), Positives = 36/68 (52%)
Frame = -2
Query: 310 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFR* 131
G E L VLNEL+ DA DGR+ L F + ++LC+R T +R+ L VGF
Sbjct: 25 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGTPKRIGLQGCAQVGFLV 84
Query: 130 ILCPPIAV 107
+ P+ V
Sbjct: 85 LFVMPLLV 92
>UniRef50_A3B198 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 128
Score = 49.2 bits (112), Expect = 7e-05
Identities = 21/27 (77%), Positives = 24/27 (88%)
Frame = +3
Query: 345 DEXLVAGFGRKGHAVGDIPGVRFKVVK 425
DE L++GFG KGHAVGDI GVRF+VVK
Sbjct: 67 DEVLISGFGHKGHAVGDIRGVRFEVVK 93
>UniRef50_UPI00004CC6C0 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 143
Score = 47.2 bits (107), Expect = 3e-04
Identities = 25/68 (36%), Positives = 35/68 (51%)
Frame = -2
Query: 310 GDECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFRTHVGFR* 131
G E L VLNEL+ DA DGR+ L F + ++LC+R +R+ L VGF
Sbjct: 56 GHERCDLLPVLNELHPDALPDGRIWLFGLNPYFFQHNSLCMRGAPKRIGLQGCAQVGFLV 115
Query: 130 ILCPPIAV 107
+ P+ V
Sbjct: 116 LFVMPLLV 123
Score = 38.3 bits (85), Expect = 0.13
Identities = 14/31 (45%), Positives = 26/31 (83%)
Frame = -1
Query: 455 VESEERHVGYFYHLKTNSGNVTDGVTFTTES 363
++S++R++GYF HLK +S ++T +TF+T+S
Sbjct: 9 LQSQQRNIGYFNHLKEDSRDITYSMTFSTKS 39
>UniRef50_Q9NEH6 Cluster: EG:BACH59J11.1 protein; n=2;
Bilateria|Rep: EG:BACH59J11.1 protein - Drosophila
melanogaster (Fruit fly)
Length = 154
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 143 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++
Sbjct: 56 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 109
>UniRef50_P10735 Cluster: 40S ribosomal protein S12, mitochondrial
precursor; n=7; Coelomata|Rep: 40S ribosomal protein
S12, mitochondrial precursor - Drosophila melanogaster
(Fruit fly)
Length = 140
Score = 46.0 bits (104), Expect = 7e-04
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 143 HMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
H+ T+ P G AKG+VL+ + + K+PNSA RKCV V+L GK++ A++
Sbjct: 42 HIKTRPPRQPLDGKPFAKGVVLKTLIKKPKKPNSANRKCVLVRL-STGKEMVAYI 95
>UniRef50_UPI0000D55D7C Cluster: PREDICTED: similar to 40S ribosomal
protein S12, mitochondrial precursor (MT-RPS12)
(Technical knockout locus protein); n=2; Coelomata|Rep:
PREDICTED: similar to 40S ribosomal protein S12,
mitochondrial precursor (MT-RPS12) (Technical knockout
locus protein) - Tribolium castaneum
Length = 156
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/58 (39%), Positives = 35/58 (60%)
Frame = +2
Query: 134 TKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
T H+ + P G KG+VL+ + + K+PNSA RKCV V+L NGK++ A++
Sbjct: 57 TGPHIKERKPRRPLDGKPFMKGVVLKTLIKKPKKPNSANRKCVLVRL-SNGKEMVAYI 113
>UniRef50_Q7SZ18 Cluster: Mrps12-prov protein; n=8;
Euteleostomi|Rep: Mrps12-prov protein - Xenopus laevis
(African clawed frog)
Length = 150
Score = 43.6 bits (98), Expect = 0.004
Identities = 22/46 (47%), Positives = 30/46 (65%)
Frame = +2
Query: 170 PFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
P G KG+VL+ + + K+PNSA RKC RV+L NGK+V F+
Sbjct: 62 PTFGCPQLKGVVLKTMIRKPKKPNSANRKCARVRL-SNGKEVICFI 106
>UniRef50_Q1PPX2 Cluster: Em1-tg19B; n=1; Euplotes aediculatus|Rep:
Em1-tg19B - Euplotes aediculatus
Length = 139
Score = 40.7 bits (91), Expect = 0.025
Identities = 22/52 (42%), Positives = 30/52 (57%)
Frame = -2
Query: 307 DECGHFLSVLNELYTDAFADGRVGLLSFYTNFLEDDALCVRCTTERVSLPFR 152
+E HFL VL EL++DA ++G V LL F + DDA C +E + L R
Sbjct: 70 NESSHFLVVLFELHSDALSNGCVWLLGFDCDLFYDDACCAWSNSEWLILGSR 121
>UniRef50_A5DX89 Cluster: 30S ribosomal protein S12; n=6;
Saccharomycetales|Rep: 30S ribosomal protein S12 -
Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 183
Score = 40.3 bits (90), Expect = 0.033
Identities = 17/38 (44%), Positives = 29/38 (76%)
Frame = +2
Query: 194 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
+G++L + ++ K+PNSA+RKC RV+L NGK ++A +
Sbjct: 90 RGVILRIMILKPKKPNSALRKCARVRL-SNGKVISALI 126
>UniRef50_O70089 Cluster: 30S ribosomal protein S12; n=35; cellular
organisms|Rep: 30S ribosomal protein S12 - Aquifex
aeolicus
Length = 128
Score = 39.5 bits (88), Expect = 0.057
Identities = 21/51 (41%), Positives = 30/51 (58%)
Frame = +2
Query: 155 KWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
K KA G +G+ + V K+PNSA+RK RV+L NG +VTA++
Sbjct: 18 KSKAPALQGCPQKRGVCVRVYTVTPKKPNSALRKVARVRL-SNGIEVTAYI 67
>UniRef50_Q9XTY5 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 157
Score = 38.7 bits (86), Expect = 0.100
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 179 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
G SH KGIVL+ V K+PNS RKC V+L G +V A++
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYI 113
>UniRef50_O14182 Cluster: Mitochondrial ribosomal protein subunit
S12; n=2; Ascomycota|Rep: Mitochondrial ribosomal
protein subunit S12 - Schizosaccharomyces pombe (Fission
yeast)
Length = 146
Score = 37.9 bits (84), Expect = 0.17
Identities = 20/61 (32%), Positives = 33/61 (54%)
Frame = +2
Query: 125 KNSTKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAF 304
+N K T ++ G+ +G+ V+ K+PNSA+RK RV+L G+ VTA+
Sbjct: 29 RNKEKRPEKTNKQSVALEGSPFRRGVCTRVFTVKPKKPNSAVRKVARVRL-STGRSVTAY 87
Query: 305 V 307
+
Sbjct: 88 I 88
>UniRef50_O15235 Cluster: 28S ribosomal protein S12, mitochondrial
precursor; n=13; Deuterostomia|Rep: 28S ribosomal
protein S12, mitochondrial precursor - Homo sapiens
(Human)
Length = 138
Score = 37.9 bits (84), Expect = 0.17
Identities = 20/49 (40%), Positives = 27/49 (55%)
Frame = +2
Query: 161 KANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
K P G KG+VL + K+PNSA RKC RV+L G++ F+
Sbjct: 48 KLGPTEGRPQLKGVVLCTFTRKPKKPNSANRKCCRVRL-STGREAVCFI 95
>UniRef50_P53732 Cluster: 37S ribosomal protein S12, mitochondrial
precursor; n=18; Dikarya|Rep: 37S ribosomal protein S12,
mitochondrial precursor - Saccharomyces cerevisiae
(Baker's yeast)
Length = 153
Score = 35.9 bits (79), Expect = 0.70
Identities = 18/38 (47%), Positives = 27/38 (71%)
Frame = +2
Query: 194 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
KG+VL + ++ K+PNSA RK RV+L NG V+A++
Sbjct: 59 KGVVLRVMVLKPKKPNSAQRKACRVRL-TNGNVVSAYI 95
>UniRef50_P14149 Cluster: Chloroplast 30S ribosomal protein S12;
n=5; cellular organisms|Rep: Chloroplast 30S ribosomal
protein S12 - Chlamydomonas reinhardtii
Length = 133
Score = 35.9 bits (79), Expect = 0.70
Identities = 21/59 (35%), Positives = 31/59 (52%)
Frame = +2
Query: 131 STKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
S + + K K+ +GI L V K+PNSA+RK RV+L G +VTA++
Sbjct: 10 SARKKITKKTKSPALKSCPQRRGICLRVYTVTPKKPNSALRKVARVRL-TTGFEVTAYI 67
>UniRef50_A6SKP5 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 659
Score = 34.3 bits (75), Expect = 2.2
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 40 YPTLGKPRRQYERRVST*TTAREQRWADKEFNESPHGY 153
+P++G P + R ST TAR Q +EF+ +P+G+
Sbjct: 202 FPSMGTPTPRQNHRFSTPATARRQANTSEEFSPAPYGH 239
>UniRef50_Q5K6X0 Cluster: Ribosomal protein S12, putative; n=2;
Dikarya|Rep: Ribosomal protein S12, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 176
Score = 33.1 bits (72), Expect = 5.0
Identities = 19/58 (32%), Positives = 31/58 (53%), Gaps = 2/58 (3%)
Frame = +2
Query: 140 AHMGTKWKANP--FGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
A TK K++ G K + + + ++PNSA+RK RV+L NG+ TA++
Sbjct: 62 ARKSTKRKSSVPLLDGCFQKKAVCAKVYTTKPRKPNSAVRKVARVKL-SNGQMTTAYI 118
>UniRef50_Q2ILV7 Cluster: Putative uncharacterized protein
precursor; n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep:
Putative uncharacterized protein precursor -
Anaeromyxobacter dehalogenans (strain 2CP-C)
Length = 370
Score = 32.7 bits (71), Expect = 6.6
Identities = 23/60 (38%), Positives = 29/60 (48%)
Frame = -3
Query: 255 LRMAELGCLASTPTFSRTMPFA*DAPPKGLAFHFVPMWAFVEFFVRPSLFTSGGSRAYAP 76
L +A GC+ +TP S P A APP+ L +W + E FV P F GG Y P
Sbjct: 39 LAIAASGCVVATPVPSEPPPVAMPAPPQPL-----QVWYYGEHFV-PDTF--GGGWCYEP 90
>UniRef50_A7S120 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 110
Score = 32.7 bits (71), Expect = 6.6
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +2
Query: 194 KGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
KG+ ++ + K+PNSA RKC ++L NGK ++A++
Sbjct: 36 KGVCVKVFIRKPKKPNSAQRKCALLKL-SNGKTISAYI 72
>UniRef50_Q26DY4 Cluster: Putative uncharacterized protein; n=2;
Bacteroidetes|Rep: Putative uncharacterized protein -
Flavobacteria bacterium BBFL7
Length = 394
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 379 PLRPNPATSXSSFXSMWFRQPSXGDECGHFLSVLNELYTD 260
P P T +WF S D GHF++ L+E Y D
Sbjct: 158 PWCPRNITDGDENSGIWFDNGSVYDVSGHFIATLDEFYND 197
>UniRef50_Q11EN9 Cluster: Putative uncharacterized protein; n=1;
Mesorhizobium sp. BNC1|Rep: Putative uncharacterized
protein - Mesorhizobium sp. (strain BNC1)
Length = 338
Score = 32.3 bits (70), Expect = 8.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 285 PFLMSCTRTHLRMAELGCLASTPTFSRTMPFA 190
P + R+H ++ E+ C + P +S T+PFA
Sbjct: 240 PTAFNSARSHNKILEIACFGAAPVYSSTVPFA 271
>UniRef50_A6LJY1 Cluster: Glycosyl transferase, group 1; n=1;
Thermosipho melanesiensis BI429|Rep: Glycosyl
transferase, group 1 - Thermosipho melanesiensis BI429
Length = 383
Score = 32.3 bits (70), Expect = 8.7
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 146 CGLSLNSLSAHRCSRAVVHVLTRRSYCLRGLPSV 45
C +++ SL HR VL R YC RG+P V
Sbjct: 280 CDIAIGSLGMHRIGLRKSSVLKVREYCARGIPFV 313
>UniRef50_Q9TMN0 Cluster: Apicoplast 30S ribosomal protein S12; n=3;
Eukaryota|Rep: Apicoplast 30S ribosomal protein S12 -
Toxoplasma gondii
Length = 121
Score = 32.3 bits (70), Expect = 8.7
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 122 TKNSTKAHMGTKWKANPFGGAS--HAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKV 295
T N H K K + + KG+ ++ K+PNSA+RK +++L KN K++
Sbjct: 3 TNNQLLKHSRIKKKKQSYNFYTKPQIKGLCIKVFTRTPKKPNSALRKIAKIKL-KNKKEI 61
Query: 296 TAFV 307
A++
Sbjct: 62 LAYI 65
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,044,599
Number of Sequences: 1657284
Number of extensions: 12921311
Number of successful extensions: 26848
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 26016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26839
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40820699206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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