Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_J06
(584 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical pr... 118 2e-27
Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical p... 29 3.2
AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical ... 29 3.2
Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical pr... 28 5.6
Z79605-6|CAB01906.3| 323|Caenorhabditis elegans Hypothetical pr... 28 5.6
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 27 9.8
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z70684-7|CAA94601.1| 143|Caenorhabditis elegans Hypothetical
protein F28D1.7 protein.
Length = 143
Score = 118 bits (285), Expect = 2e-27
Identities = 53/61 (86%), Positives = 58/61 (95%)
Frame = +2
Query: 125 KNSTKAHMGTKWKANPFGGASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAF 304
K KAH+GT+WK+NPFGGASHAKGIVLEK+GVEAKQPNSAIRKCVRVQLIKNGKK+TAF
Sbjct: 25 KRYKKAHIGTRWKSNPFGGASHAKGIVLEKIGVEAKQPNSAIRKCVRVQLIKNGKKITAF 84
Query: 305 V 307
V
Sbjct: 85 V 85
Score = 101 bits (242), Expect = 4e-22
Identities = 45/58 (77%), Positives = 50/58 (86%)
Frame = +3
Query: 309 PXDGCLNHIEXNDEXLVAGFGRKGHAVGDIPGVRFKVVKVANVSLLALYKEKKERPXS 482
P DGCLN +E NDE LV+GFGR GHAVGDIPGVRFK+VKVAN SL+AL+K KKERP S
Sbjct: 86 PNDGCLNFVEENDEVLVSGFGRSGHAVGDIPGVRFKIVKVANTSLIALFKGKKERPRS 143
Score = 27.1 bits (57), Expect = 9.8
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +1
Query: 49 LGKPRRQYERRVST*TTAREQRWADKEFNESPHGYEMEG*PFRWCISRKG 198
+GKP+ R T +EQRW DK + ++ G + PF KG
Sbjct: 1 MGKPKGLCTARKLK-THRQEQRWNDKRYKKAHIGTRWKSNPFGGASHAKG 49
>Z92838-1|CAB07406.1| 157|Caenorhabditis elegans Hypothetical
protein T03D8.2 protein.
Length = 157
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/43 (48%), Positives = 27/43 (62%)
Frame = +2
Query: 179 GASHAKGIVLEKVGVEAKQPNSAIRKCVRVQLIKNGKKVTAFV 307
G SH KGIVL+ V K+PNS RKC V+L G +V A++
Sbjct: 72 GYSHYKGIVLKTVIRHPKKPNSGNRKCAIVRL-STGAEVCAYI 113
>Z81054-7|CAB02881.1| 472|Caenorhabditis elegans Hypothetical
protein F01D4.4 protein.
Length = 472
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +3
Query: 111 AMGGQRIQRKPTWVRNGRLTLSVVH 185
AM G+ I+R W+RNG T+ V H
Sbjct: 370 AMTGEPIKRAVVWIRNGTETVPVKH 394
>Z69902-11|CAA93766.2| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 SDGRTKNSTKAHMGTKWKANP 172
+D STKA G KWK NP
Sbjct: 850 TDSEASTSTKAKKGKKWKPNP 870
>AL033535-1|CAB70217.1| 935|Caenorhabditis elegans Hypothetical
protein C47D12.8 protein.
Length = 935
Score = 28.7 bits (61), Expect = 3.2
Identities = 11/21 (52%), Positives = 12/21 (57%)
Frame = +2
Query: 110 SDGRTKNSTKAHMGTKWKANP 172
+D STKA G KWK NP
Sbjct: 850 TDSEASTSTKAKKGKKWKPNP 870
>Z81041-7|CAE17709.1| 95|Caenorhabditis elegans Hypothetical
protein C27A7.9 protein.
Length = 95
Score = 27.9 bits (59), Expect = 5.6
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = -1
Query: 272 AVHGRICGWQSWAA*LLHQLSRGRCPLREMHHRKG*PSISYPCGLSLNSLSAHRCSRAVV 93
AVH + C W +WAA S G C + S + C + N+ C+ V
Sbjct: 16 AVHSQNCTWSNWAAWTTCSDSCGNC--GNQTRARSCSSQTASCICTGNTTELQTCNNDVC 73
Query: 92 HVLTRRSYCLRGLPS 48
+ R+S C G P+
Sbjct: 74 -IFPRKS-CCSGQPA 86
>Z79605-6|CAB01906.3| 323|Caenorhabditis elegans Hypothetical
protein ZK678.4 protein.
Length = 323
Score = 27.9 bits (59), Expect = 5.6
Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
Frame = -2
Query: 343 FXSMWFRQPSXGDECGH-----FLSVLNELYTDAFADGRVGLLSF 224
F S WF QP CG F S+L L++ F R+ +L+F
Sbjct: 96 FNSFWFSQPRIFTYCGFISLMVFASLLIPLFSSCFIYFRLDILTF 140
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 418 TLKRTPGMSPTA*PLRPNPATSXSS 344
T RTP +P A P RP P+ S ++
Sbjct: 38 TTMRTPAATPAAPPTRPTPSRSSAA 62
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 27.1 bits (57), Expect = 9.8
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -2
Query: 418 TLKRTPGMSPTA*PLRPNPATSXSS 344
T RTP +P A P RP P+ S ++
Sbjct: 167 TTMRTPAATPAAPPTRPTPSRSSAA 191
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,100,836
Number of Sequences: 27780
Number of extensions: 301726
Number of successful extensions: 539
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 539
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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