Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_J06
(584 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein. 27 0.14
EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2 prot... 27 0.14
AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2 prot... 27 0.14
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 24 0.96
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 0.96
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 0.96
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.2
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 22 3.9
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 22 3.9
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 22 5.1
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 6.7
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 8.9
>X16709-1|CAA34681.1| 162|Apis mellifera phospholipase A-2 protein.
Length = 162
Score = 27.1 bits (57), Expect = 0.14
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 333 CGLGNRXRGTNAVTFFPFLMSCTRTH 256
CG GN+ G N + F +C RTH
Sbjct: 37 CGHGNKSSGPNELGRFKHTDACCRTH 62
>EF373554-1|ABQ28728.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 27.1 bits (57), Expect = 0.14
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 333 CGLGNRXRGTNAVTFFPFLMSCTRTH 256
CG GN+ G N + F +C RTH
Sbjct: 42 CGHGNKSSGPNELGRFKHTDACCRTH 67
>AF438408-1|AAL30844.1| 167|Apis mellifera phospholipase A2
protein.
Length = 167
Score = 27.1 bits (57), Expect = 0.14
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -3
Query: 333 CGLGNRXRGTNAVTFFPFLMSCTRTH 256
CG GN+ G N + F +C RTH
Sbjct: 42 CGHGNKSSGPNELGRFKHTDACCRTH 67
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 24.2 bits (50), Expect = 0.96
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = -3
Query: 528 TTRFPTAGHLSQCTPMXLVAPFSLCRERGETRWL 427
T F T+ + C +V PFS E E RWL
Sbjct: 80 TNYFVTSLAFADCLVGLVVMPFSAIYEVLENRWL 113
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 24.2 bits (50), Expect = 0.96
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 378 GHAVGDIPGVRFKVVKVANVSLL 446
GH V D+PGVR +V++ + LL
Sbjct: 69 GHPVNDVPGVR-RVLRNGTLVLL 90
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 24.2 bits (50), Expect = 0.96
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +3
Query: 378 GHAVGDIPGVRFKVVKVANVSLL 446
GH V D+PGVR +V++ + LL
Sbjct: 69 GHPVNDVPGVR-RVLRNGTLVLL 90
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 2.2
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +3
Query: 378 GHAVGDIPGVR 410
G AVGD+PG+R
Sbjct: 42 GSAVGDVPGLR 52
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 22.2 bits (45), Expect = 3.9
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 67 QYERRVST*TTAREQRWADKEFNESPHGYEMEG*PFRWCISRKGHRPRESWCR 225
Q++ ++ EQR DK F Y + PF + I+ +P ++ R
Sbjct: 465 QFDTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAAIR 517
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 22.2 bits (45), Expect = 3.9
Identities = 13/53 (24%), Positives = 23/53 (43%)
Frame = +1
Query: 67 QYERRVST*TTAREQRWADKEFNESPHGYEMEG*PFRWCISRKGHRPRESWCR 225
Q++ ++ EQR DK F Y + PF + I+ +P ++ R
Sbjct: 465 QFDTTINNGLLLEEQRNDDKPFLIKIRQYRLNHKPFNFHITINADKPMKAAIR 517
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 21.8 bits (44), Expect = 5.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +2
Query: 236 PNSAIRKCV 262
PNSA+RKC+
Sbjct: 584 PNSAVRKCM 592
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.4 bits (43), Expect = 6.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 185 SHAKGIVLEKVGVEAKQPNSAIR 253
+H K +VLE+ ++K P S R
Sbjct: 73 THEKKLVLERSKTKSKSPESRDR 95
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.0 bits (42), Expect = 8.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -2
Query: 325 RQPSXGDECGHFLSVLNELYT 263
R+P+ G LSVL EL T
Sbjct: 516 RRPNPGTVFARLLSVLTELRT 536
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,921
Number of Sequences: 438
Number of extensions: 3907
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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