Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_J05
(654 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 42 8e-05
SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2 |... 42 8e-05
SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces pom... 41 2e-04
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 40 3e-04
SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces pomb... 39 7e-04
SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces ... 38 0.001
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 38 0.002
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 37 0.002
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 36 0.007
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 34 0.021
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 34 0.021
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 33 0.036
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 33 0.036
SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 33 0.048
SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyce... 33 0.048
SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein Pof11|Schizos... 32 0.063
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 31 0.11
SPBC713.04c |||U3 snoRNP-associated protein Utp1|Schizosaccharom... 31 0.11
SPBC17D11.08 |||WD repeat protein, human WDR68 family|Schizosacc... 31 0.15
SPCC126.01c ||SPCC576.18c|conserved fungal protein|Schizosacchar... 31 0.15
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 30 0.34
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 29 0.44
SPAC23C4.02 |crn1||actin binding protein, coronin Crn1|Schizosac... 29 0.44
SPBC16D10.05 |mok13||alpha-1,3-glucan synthase Mok13|Schizosacch... 29 0.59
SPAC31A2.14 |||WD repeat protein, human WRDR48 family|Schizosacc... 29 0.59
SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5... 29 0.59
SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces p... 29 0.77
SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9 |Schizosacchar... 28 1.0
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 27 1.8
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 27 1.8
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 27 2.4
SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1 |Schizosaccharo... 27 2.4
SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyc... 27 2.4
SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein Pop2|Schizosacchar... 26 4.1
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 26 4.1
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 26 5.5
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 25 7.2
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 25 9.5
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 41.9 bits (94), Expect = 8e-05
Identities = 27/78 (34%), Positives = 42/78 (53%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH++ V+ H+ + +LSCS D+T IW Q+ N +IL GH+ V + +H
Sbjct: 93 GHMDYVRVCTFHH-EYPWILSCSDDQTIRIWNWQSR--NCIAILTGHSHYV--MCAAFHP 147
Query: 529 DRLTIYTASTDSTIXVWE 582
I +AS D T+ VW+
Sbjct: 148 SEDLIVSASLDQTVRVWD 165
Score = 25.0 bits (52), Expect = 9.5
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 447
GH N+V H Q +LS S DKT +W L
Sbjct: 254 GHFNNVSCCLFHPHQEL-ILSASEDKTIRVWDL 285
>SPCC895.06 |||RNA polymerase II elongator complex subunit Elp2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 760
Score = 41.9 bits (94), Expect = 8e-05
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 1/81 (1%)
Frame = +1
Query: 211 VACNRKPEVVXWNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSV-KWIHNHN 387
V CNR P W+ + + YGA + V DP K+ +++ H+G +N V + N
Sbjct: 9 VGCNRIPTAATWSSNLGLIYGAERLIAVADP---FKEINYLMAGHSGRINCVCELATNSE 65
Query: 388 GQTTELLSCSVDKTAVIWTLQ 450
++ +LS + DKT +W L+
Sbjct: 66 YRSPFILSGASDKTLRLWQLE 86
Score = 30.3 bits (65), Expect = 0.25
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 2/69 (2%)
Frame = +1
Query: 430 AVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLK 609
AVI + WN +LKGH+ VT I + D I +A D + + E+ +
Sbjct: 558 AVIRLYETQSWNQQQVLKGHSLTVTTI--KFSPDDRYILSAGRDRLVCLHEQAENLLDYN 615
Query: 610 Q--SISLHS 630
SI HS
Sbjct: 616 NFASIKAHS 624
Score = 25.0 bits (52), Expect = 9.5
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
Frame = -1
Query: 603 GYRTXYPFPNXNGRISGRSVNSKSVX-MVISIYISNSXCMS--LENTGDVPATVL*CPDD 433
GY + NG I+ S S++ VI +Y + S L+ T+ PDD
Sbjct: 531 GYEVYACAISNNGNIAATSCKSQTPEHAVIRLYETQSWNQQQVLKGHSLTVTTIKFSPDD 590
Query: 432 SSLIN*AREQLCCL 391
+++ R++L CL
Sbjct: 591 RYILSAGRDRLVCL 604
>SPBC354.03 |swd3||WD repeat protein Swd3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 380
Score = 40.7 bits (91), Expect = 2e-04
Identities = 28/90 (31%), Positives = 43/90 (47%)
Frame = +1
Query: 328 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTN 507
T+ H+ G ++ VKW + L S S DKT IW + C LKGHT V++
Sbjct: 91 TLFGHYRG-ISQVKWATG----SKYLASASDDKTIRIWDFEKRC--SVRCLKGHTNYVSS 143
Query: 508 IYGNYHXDRLTIYTASTDSTIXVWERIXGT 597
I +++ + + S D T+ +W GT
Sbjct: 144 I--DFNPLGTLLVSGSWDETVRIWNLQDGT 171
Score = 36.7 bits (81), Expect = 0.003
Identities = 27/90 (30%), Positives = 43/90 (47%)
Frame = +1
Query: 325 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVT 504
V L HT +V+S+ + N T L+S S D+T IW LQ+G +L H+ +
Sbjct: 131 VRCLKGHTNYVSSIDF----NPLGTLLVSGSWDETVRIWNLQDG--TCLRMLPAHSEPII 184
Query: 505 NIYGNYHXDRLTIYTASTDSTIXVWERIXG 594
++ + D TAS D +W+ + G
Sbjct: 185 SV--SISADGTLCATASYDGMARIWDVLSG 212
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 39.9 bits (89), Expect = 3e-04
Identities = 30/94 (31%), Positives = 50/94 (53%)
Frame = +1
Query: 301 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSIL 480
P+ TK +V +H +G ++SV + + HN L +CS DKT +W L+N + + L
Sbjct: 267 PDASTKPARSVHAH-SGPIHSVAF-NPHNDFI--LATCSTDKTIALWDLRNLNQRLHT-L 321
Query: 481 KGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+GH VT I + H + + + + S D VW+
Sbjct: 322 EGHEDIVTKISFSPHEEPI-LASTSADRRTLVWD 354
>SPAC57A10.05c |pof1||F-box protein Pof1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 605
Score = 38.7 bits (86), Expect = 7e-04
Identities = 33/110 (30%), Positives = 51/110 (46%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 483
N +T + +++L HT V + + +T L+S S D T +W G +T L+
Sbjct: 339 NYRTSECISILHGHTDSVLCLTF------DSTLLVSGSADCTVKLWHFSGGK-RIT--LR 389
Query: 484 GHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSG 633
GHT V ++ DR + + S DSTI +W T T + S H G
Sbjct: 390 GHTGPVNSV--RIIRDRGLVLSGSDDSTIKIWS--LETNTCLHTFSAHIG 435
Score = 32.7 bits (71), Expect = 0.048
Identities = 22/71 (30%), Positives = 30/71 (42%)
Frame = +1
Query: 397 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
+ L SCS+D T W ++ L GH GV I D L + + + D + V
Sbjct: 445 SRLFSCSLDGTIKQWDIEKK--KCVHTLFGHIEGVWEIAA----DHLRLISGAHDGVVKV 498
Query: 577 WERIXGTVTLK 609
WE TLK
Sbjct: 499 WEACECVHTLK 509
>SPAC6B12.15 |cpc2|rkp1|RACK1 homologue Cpc2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 314
Score = 37.9 bits (84), Expect = 0.001
Identities = 27/95 (28%), Positives = 46/95 (48%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + V + + + +++S S DKT IW + C T GH+ V+ + + +
Sbjct: 103 GHTSDVLSV-SISPDNRQVVSGSRDKTIKIWNIIGNC-KYTITDGGHSDWVSCVRFSPNP 160
Query: 529 DRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSG 633
D LT +A D + VW+ T +L+ S H+G
Sbjct: 161 DNLTFVSAGWDKAVKVWD--LETFSLRTSHYGHTG 193
Score = 35.1 bits (77), Expect = 0.009
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 406 LSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWER 585
LS S DKT +W L+ G T GHT V ++ + D + + S D TI +W
Sbjct: 79 LSASWDKTIRLWDLEKG--ECTHQFVGHTSDVLSV--SISPDNRQVVSGSRDKTIKIWNI 134
Query: 586 I 588
I
Sbjct: 135 I 135
Score = 27.5 bits (58), Expect = 1.8
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWN---VTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIX 573
LLS S DK+ ++W L N L GH+ V++ ++ D +AS D TI
Sbjct: 31 LLSGSRDKSIILWNLVRDDVNYGVAQRRLTGHSHFVSDCALSF--DSHYALSASWDKTIR 88
Query: 574 VWERIXGTVT 603
+W+ G T
Sbjct: 89 LWDLEKGECT 98
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 37.5 bits (83), Expect = 0.002
Identities = 24/84 (28%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L +CS D T IW+ ++ + + L+GH V + + D + TAS+D +WE
Sbjct: 230 LATCSADATVNIWSTEDMSFMLERRLQGHQRWVWDC--AFSADSTYLVTASSDHVARLWE 287
Query: 583 RIXGTVTLKQSISLH-SGLCLTLH 651
G T++Q H + +C+ L+
Sbjct: 288 LSSGE-TIRQYSGHHKAAVCVALN 310
Score = 29.9 bits (64), Expect = 0.34
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 481 KGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+GHT VT I +H D + T+S D T+ VW+
Sbjct: 80 EGHTNNVTAIA--FHCDGKWLATSSEDGTVKVWD 111
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 37.1 bits (82), Expect = 0.002
Identities = 27/102 (26%), Positives = 44/102 (43%)
Frame = +1
Query: 301 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSIL 480
PN++ + +L HT V + W H N L +CS+D + W L++ + V S
Sbjct: 309 PNDRAIE--FMLHGHTRAVTDMNW-HRQNPDV--LATCSIDSSVHCWDLRSPRFPVNSFY 363
Query: 481 KGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTL 606
H G T + NY I +S + +W+ G+ L
Sbjct: 364 DWHN-GATQVKWNYKNPH--ILASSHGRLVRIWDDRYGSAPL 402
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 35.5 bits (78), Expect = 0.007
Identities = 24/84 (28%), Positives = 42/84 (50%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
V+ H+ +N+V I+ N L + S DKT +W L+N + L+GH V +
Sbjct: 276 VIQAHSKAINAVA-INPFNDYL--LATASADKTVALWDLRNP-YQRLHTLEGHEDEVYGL 331
Query: 511 YGNYHXDRLTIYTASTDSTIXVWE 582
+ H D + ++STD + +W+
Sbjct: 332 EWSPH-DEPILASSSTDRRVCIWD 354
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.9 bits (74), Expect = 0.021
Identities = 29/116 (25%), Positives = 49/116 (42%)
Frame = +1
Query: 235 VVXWNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC 414
VV +N G A N VV N K+ + + H + + +++ +T+ SC
Sbjct: 19 VVKYNRTGKYVLAAGNERVVRLWNVKSGACIHEYAGHGHEILDLDLVYD----STKFASC 74
Query: 415 SVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
DK +W + G V L GH + I Y+ D + + S DS + +W+
Sbjct: 75 GGDKFIQVWDVNTG--KVDRRLGGHLAQINTI--RYNEDSSILASGSFDSKVRLWD 126
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 33.9 bits (74), Expect = 0.021
Identities = 23/83 (27%), Positives = 32/83 (38%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L H+G V + W H G T L S S D ++W G W+ H V +
Sbjct: 49 LRGHSGPVWQLGWAHPKFG--TILASASYDGHVIVWRETGGVWSELMDHTAHQASVNAVS 106
Query: 514 GNYHXDRLTIYTASTDSTIXVWE 582
H + AS+D + V E
Sbjct: 107 WAPHEYGALLACASSDGKVSVLE 129
Score = 33.1 bits (72), Expect = 0.036
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L +CS D+T +++++N + L+GH+ V + + + +AS D + VW
Sbjct: 24 LATCSSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWR 83
Query: 583 RIXG 594
G
Sbjct: 84 ETGG 87
Score = 28.7 bits (61), Expect = 0.77
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGCWNVTSI 477
L+ H V W + T L S S DK IWT + +G W T +
Sbjct: 201 LAGHVDWTRDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPL 249
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 33.1 bits (72), Expect = 0.036
Identities = 21/87 (24%), Positives = 39/87 (44%)
Frame = +1
Query: 322 RVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGV 501
R +L H + +K+ NH+G L SC+ DK +W NG +GHT +
Sbjct: 2 RPIILQGHERPLTQIKY--NHDGDL--LFSCAKDKVINVWFSHNG--ERLGTYEGHTGAI 55
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWE 582
+ + + + + D+T+ +W+
Sbjct: 56 WTC--DINKSSTLMVSGAADNTMRLWD 80
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 33.1 bits (72), Expect = 0.036
Identities = 37/125 (29%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Frame = +1
Query: 238 VXWNYDG-IICYGAC-NAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTE--- 402
V W D II G+ N + DP +K L HT + ++ W H +
Sbjct: 183 VAWAPDASIIATGSMDNTIRFWDP-KKGSPIGDALRRHTKPIMALCWQPLHLAPDSGPYL 241
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-YGNYHXDRLTIYTASTDSTIXVW 579
L S S D T IW ++ T L GHT +T + +G + IY++S D TI +W
Sbjct: 242 LASGSKDNTVRIWNVKLRTLLFT--LSGHTAPITCVRWGGQNW----IYSSSYDKTIRIW 295
Query: 580 ERIXG 594
+ G
Sbjct: 296 DAKDG 300
Score = 30.7 bits (66), Expect = 0.19
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L+S S D ++W Q +T + GH V + ++ D I TAS DS++ +W+
Sbjct: 361 LVSASDDLQLILWDPQKSTKPITK-MHGHQKVVN--HASFSPDGRCIATASFDSSVRLWD 417
>SPAC18G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 114
Score = 32.7 bits (71), Expect = 0.048
Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +1
Query: 367 KWIHNHNGQTTELLSCSVDKTAVIWTLQNGC--WNVTSILKGHTXGVTNIYGNY 522
+W+ + + + ++C D IW GC W + + +G T +T I Y
Sbjct: 14 QWVETSSLELVDSVNCVADLCHAIWMFNGGCADWRLQILKEGFTVPMTGIISQY 67
>SPBP22H7.07 |prp5|cwf1|WD repeat protein Prp5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 473
Score = 32.7 bits (71), Expect = 0.048
Identities = 27/107 (25%), Positives = 47/107 (43%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
V+ H+ GH++ V + H L++ D A +W ++ NV +L GH V ++
Sbjct: 239 VIRHYHGHLSGVYALKLHPTLDV-LVTAGRDAVARVWDMRTR-QNV-HVLSGHKSTVASL 295
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLTLH 651
+ + T S DSTI +W+ G + + L+LH
Sbjct: 296 AVQEFDPQ--VVTGSMDSTIRLWDLAAGKTLTTLTHHKKTVRALSLH 340
>SPAC29E6.01 |pof11|SPAC30.05, mug156|F-box protein
Pof11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 506
Score = 32.3 bits (70), Expect = 0.063
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQ--NGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
++S S D TA +W L + +L+GH V ++ Y I TAS+D T+
Sbjct: 316 IISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSV--QYSSKTGLIVTASSDRTLRT 373
Query: 577 WERIXG 594
W+ G
Sbjct: 374 WDITTG 379
Score = 27.1 bits (57), Expect = 2.4
Identities = 16/60 (26%), Positives = 32/60 (53%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
++S S D+T +W + + + L GH+ V + ++ R + + S+DSTI +W+
Sbjct: 234 MVSGSKDRTVSVWDVNSRF--ILYKLYGHSGSVLCL--DFCRRRNLLVSGSSDSTIIIWD 289
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/20 (40%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
Frame = +1
Query: 211 VACNRKPEVVXWNY-DGIIC 267
+AC E++ WN+ DG+ C
Sbjct: 484 IACTHSSEILVWNFDDGLDC 503
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 31.5 bits (68), Expect = 0.11
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH+++V +I + LLSCS DK+ ++W G L+ + G + +
Sbjct: 253 GHIDTVAYIR-WSPDDRYLLSCSCDKSVILWDAFTG-----EKLRDYKHGFSVSCCCWLP 306
Query: 529 DRLTIYTASTDSTIXVWERIXGTVTLK 609
D L+ T S D I W + G + K
Sbjct: 307 DGLSFITGSPDCHITHWS-LNGEILYK 332
>SPBC713.04c |||U3 snoRNP-associated protein
Utp1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 854
Score = 31.5 bits (68), Expect = 0.11
Identities = 23/80 (28%), Positives = 38/80 (47%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNY 522
+TGH + + I + + + +S S D TA + ++ L GH V + G +
Sbjct: 142 YTGHFDDIVSI-SWSADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVS--GFF 198
Query: 523 HXDRLTIYTASTDSTIXVWE 582
D+ TIYT S D + VW+
Sbjct: 199 SKDQQTIYTVSKDGALFVWK 218
>SPBC17D11.08 |||WD repeat protein, human WDR68
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 435
Score = 31.1 bits (67), Expect = 0.15
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 3/66 (4%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ---NGCWNVTSILKGHTXGVT 504
L H G VN+VKW+ G ++L +C D +W L N T + G T G+T
Sbjct: 311 LRGHKGDVNAVKWM---PGSKSKLATCGDDCVVSLWDLDQPVNPSPAPTLSVSGTTPGMT 367
Query: 505 NIYGNY 522
Y
Sbjct: 368 GSTSEY 373
>SPCC126.01c ||SPCC576.18c|conserved fungal
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 369
Score = 31.1 bits (67), Expect = 0.15
Identities = 23/92 (25%), Positives = 40/92 (43%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 483
N T + V L HT +V + + LLS S D + ++W + + + L
Sbjct: 118 NVSTGECVETLIGHTDYVKCLLLLEEEG----LLLSGSTDASLIVWDVSSQPSRLLYKLT 173
Query: 484 GHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
GH+ G+ I + D +T ++S+I W
Sbjct: 174 GHSRGIECITRQPNTD--IFWTCGSESSIRCW 203
Score = 26.2 bits (55), Expect = 4.1
Identities = 23/84 (27%), Positives = 34/84 (40%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH ++V + + L + S DKT W+L G T + H T++
Sbjct: 220 GHQSNVYCLLFDPQDSEALWTASADKTVREWSLYQGIHEETRM--EHPDVCTDVLTLADG 277
Query: 529 DRLTIYTASTDSTIXVWERIXGTV 600
+ I TA D I VW+ G V
Sbjct: 278 N---IATACRDEEIRVWDTTTGNV 298
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 29.9 bits (64), Expect = 0.34
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 3/52 (5%)
Frame = +1
Query: 436 IWTLQNGCWNV---TSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+W L+ G + V T I GH VT+I + I T STD + +WE
Sbjct: 270 LWDLRQGQYPVSFTTIISGGHLEPVTDITYINNPPSNNIVTCSTDGLVHIWE 321
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 29.5 bits (63), Expect = 0.44
Identities = 15/60 (25%), Positives = 25/60 (41%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L++CS DK IW L G + + H + + + D +T S D + W+
Sbjct: 591 LVTCSADKNVKIWGLDFG--DCHKSIFAHQDSIMEV--TFQPDTYNFFTCSKDREVRYWD 646
>SPAC23C4.02 |crn1||actin binding protein, coronin
Crn1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 601
Score = 29.5 bits (63), Expect = 0.44
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH V + H L S S D T +W + G +V+ LK V +++
Sbjct: 132 GHSRKVGLVQYHPTAANVLASSSADNTIKLWDCEKGVAHVS--LK---MDVMCQSMSFNA 186
Query: 529 DRLTIYTASTDSTIXVWE 582
D + T S D + VW+
Sbjct: 187 DGTRLVTTSRDKKVRVWD 204
>SPBC16D10.05 |mok13||alpha-1,3-glucan synthase
Mok13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2358
Score = 29.1 bits (62), Expect = 0.59
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -2
Query: 518 FPYILVTPXVCPLRILVTFQQPFCNVQMTAVLSTEQE 408
F LV+P +C L ++ FQ+ F V++ + +QE
Sbjct: 1062 FSLFLVSPLICALATMLAFQKFFYQVRLNKGIEKKQE 1098
>SPAC31A2.14 |||WD repeat protein, human WRDR48
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 962
Score = 29.1 bits (62), Expect = 0.59
Identities = 16/34 (47%), Positives = 20/34 (58%)
Frame = +1
Query: 478 LKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
L GHT V +I D TI TAS+D+TI +W
Sbjct: 212 LVGHTDNVRDIL--ISDDGRTILTASSDATIKLW 243
>SPCC5E4.03c |taf72||transcription factor TFIID complex subunit 5
Taf72|Schizosaccharomyces pombe|chr 3|||Manual
Length = 643
Score = 29.1 bits (62), Expect = 0.59
Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-YGNYHXDRLTIYTASTDSTIXVW 579
LLSCS D +A +W++ V KGHT V ++ +G + TAS D T +W
Sbjct: 394 LLSCSEDASARLWSVDTKTALVA--YKGHTGPVWDVAFGPFGH---YFATASHDQTAQLW 448
>SPAC13G7.08c |crb3||WD repeat protein Crb3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 446
Score = 28.7 bits (61), Expect = 0.77
Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 2/84 (2%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-YGNYHXDRLTIYTASTDSTIXVW 579
L+S VD+ + T N S GH + ++ G +YTAS D+TI +W
Sbjct: 146 LISTLVDQNSTFET-SNSSVKAISHFSGHKRSIVSMEIGPGPIVSGRLYTASEDNTIRIW 204
Query: 580 ERIXGTVTLKQSISLHS-GLCLTL 648
+ T L +I+L S C+T+
Sbjct: 205 D--VSTGNLLTTIALPSTPSCMTV 226
>SPAC2E1P5.05 |||U3 snoRNP-associated protein Rrp9
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 524
Score = 28.3 bits (60), Expect = 1.0
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +1
Query: 316 KDRVTVLSHHTG--HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 447
+D VT+ H H ++V + G T E+ SCS D++ +W+L
Sbjct: 235 RDSVTLEPQHCWKHHRDAVMGLAMRRG-TNEMFSCSADRSIKVWSL 279
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 27.5 bits (58), Expect = 1.8
Identities = 19/61 (31%), Positives = 27/61 (44%)
Frame = +1
Query: 310 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGH 489
KT + L H G V W + G T L++ S D+T +W L+ G + GH
Sbjct: 434 KTGVLIRSLEEHEGDV----WTFEYVGDT--LVTGSTDRTVRVWDLRTG--ECKQVFYGH 485
Query: 490 T 492
T
Sbjct: 486 T 486
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 27.5 bits (58), Expect = 1.8
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 11/104 (10%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN-----GCWNV-TSILKGHTX 495
LS HTG+V +V W + L S S D T +W ++ C ++ L +
Sbjct: 185 LSGHTGNVLAVDWCPKNE---FVLASGSADGTCRLWDIRKVSSSFACMDLHNKYLPSNQT 241
Query: 496 GVTNIYGN-----YHXDRLTIYTASTDSTIXVWERIXGTVTLKQ 612
+++ YG + D + + TD I VW G TL++
Sbjct: 242 NISH-YGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLRE 284
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 27.1 bits (57), Expect = 2.4
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW-TLQNGCWNVTSILKGHTXGVTNIYGN 519
HT + + W N+ LLS S+DKTA +W ++ C H+ VT+I +
Sbjct: 308 HTADILDLSWSRNNF-----LLSSSMDKTARLWHPVRKDCLCCFE----HSDFVTSIAFH 358
Query: 520 YHXDRLTIYTASTDSTIXVW 579
DR + + S D + +W
Sbjct: 359 PKDDRFFL-SGSLDCKLRLW 377
>SPAC664.15 |||CCR4-Not complex subunit Caf4/Mdv1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 651
Score = 27.1 bits (57), Expect = 2.4
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +1
Query: 463 NVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHS 630
N+ + H+ +T++ ++ T+ TASTD T+ VW+ + G V L S+ HS
Sbjct: 323 NLVKQFQAHSEYITSL--DFSHPFGTLATASTDKTVKVWD-MAGVVYL-GSLKGHS 374
>SPAC17H9.19c |cdt2|sev1|WD repeat protein Cdt2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 490
Score = 27.1 bits (57), Expect = 2.4
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +1
Query: 352 HVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
H +SVK ++ N L+SCS D + + W ++
Sbjct: 227 HSHSVKQVNFCNDSPYNLVSCSRDGSIIFWDMR 259
>SPAC4D7.03 |pop2|sud1|F-box/WD repeat protein
Pop2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 703
Score = 26.2 bits (55), Expect = 4.1
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGH 489
GH V + H L+S S+DKT +W ++ T I +GH
Sbjct: 389 GHKEGVWAVKIHENT---LVSGSIDKTVRVWNIEKA--KCTHIFRGH 430
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 26.2 bits (55), Expect = 4.1
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +1
Query: 328 TVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
T++ GH SV I + ++ LLS S+DKT +W LQ
Sbjct: 475 TLVERLEGHKESVYSIA-FSPDSSILLSGSLDKTIKVWELQ 514
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 25.8 bits (54), Expect = 5.5
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = -1
Query: 444 CPDDSSLIN*AREQLCCLAIMIVYPFYRVYVSCMVTQY 331
C + S N E L L ++ +PFYR + +V QY
Sbjct: 267 CRNSSPHDNPILEYLFALVSLLAWPFYRRKLDSLVYQY 304
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 25.4 bits (53), Expect = 7.2
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +1
Query: 271 GACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
GA V V D KT D+V + H G + S+ W + +++ ++ S + IW
Sbjct: 208 GADGKVYVFDG--KTGDQVYEIDAHKGSIFSISW----SPDSSQFVTSSAGYSCKIWDAN 261
Query: 451 NG 456
G
Sbjct: 262 TG 263
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 25.0 bits (52), Expect = 9.5
Identities = 19/62 (30%), Positives = 24/62 (38%)
Frame = +1
Query: 397 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
T LS S DKT +W L G V L GH V + + D TI +
Sbjct: 137 TTFLSGSDDKTVKVWDLSTGA--VQYDLSGHEDYVRTA---SWMSATRLVSGGYDGTIRL 191
Query: 577 WE 582
W+
Sbjct: 192 WD 193
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,321,437
Number of Sequences: 5004
Number of extensions: 43949
Number of successful extensions: 192
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 162
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 295793106
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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