Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_J05
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 53 2e-07
AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical ... 42 5e-04
AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical ... 42 5e-04
Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical p... 41 9e-04
Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical pr... 40 0.001
AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore... 40 0.001
AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore... 40 0.001
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 39 0.004
AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical ... 38 0.008
Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical pr... 37 0.014
AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein. 37 0.014
Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical pr... 36 0.019
AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical... 36 0.025
Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical pr... 36 0.033
AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical ... 35 0.044
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 34 0.077
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 34 0.077
AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical ... 34 0.077
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 34 0.10
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 34 0.10
U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical pr... 34 0.10
AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic in... 34 0.10
Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical pr... 33 0.18
Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical pr... 33 0.23
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 32 0.31
AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical ... 31 0.54
U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell l... 30 1.2
AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein. 30 1.2
Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 30 1.6
U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily ass... 30 1.6
Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical pr... 29 2.9
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 29 2.9
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 29 3.8
AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical... 29 3.8
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 29 3.8
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 29 3.8
AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical ... 29 3.8
AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical ... 29 3.8
AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical ... 29 3.8
AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical... 29 3.8
Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical pr... 28 5.0
Z50794-1|CAA90656.2| 179|Caenorhabditis elegans Hypothetical pr... 28 6.7
AF303254-1|AAG50212.1| 179|Caenorhabditis elegans XL153 protein. 28 6.7
U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transport... 27 8.8
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 53.2 bits (122), Expect = 2e-07
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 2/123 (1%)
Frame = +1
Query: 238 VXWNYDGIICYGACNAVVVCDPNEKTKDRV-TVLSHHTGHVNSVKWIHNHNGQTTELL-S 411
+ W+ D AC +C N KT +++ L H + S+ W H T LL S
Sbjct: 153 IAWSPDATKIASACKNGEICIWNAKTGEQIGKTLKRHKQWITSLAWQPMHKDPTCRLLAS 212
Query: 412 CSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIX 591
C D IW G V L GHT VT + + + L IY+ S D T+ +W
Sbjct: 213 CGKDGNIFIWDTVQG--TVVRCLSGHTASVTCL--RWGGEGL-IYSGSQDRTVKMWRADD 267
Query: 592 GTV 600
G +
Sbjct: 268 GVM 270
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/85 (27%), Positives = 35/85 (41%), Gaps = 3/85 (3%)
Frame = +1
Query: 397 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-YGNYHXDRLTIYTAST--DST 567
T++ S + IW + G + LK H +T++ + H D AS D
Sbjct: 160 TKIASACKNGEICIWNAKTG-EQIGKTLKRHKQWITSLAWQPMHKDPTCRLLASCGKDGN 218
Query: 568 IXVWERIXGTVTLKQSISLHSGLCL 642
I +W+ + GTV S S CL
Sbjct: 219 IFIWDTVQGTVVRCLSGHTASVTCL 243
>AF047651-2|AAL13318.1| 486|Caenorhabditis elegans Hypothetical
protein C05D2.10b protein.
Length = 486
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L+ H V+ +W+ GQ ++++ S D+TA +W ++ G V +IL GH + +
Sbjct: 276 LTGHRAPVSCCEWLAG--GQ--QMVTASWDRTANVWDVEKG--EVVNILSGHESELNHC- 328
Query: 514 GNYHXDRLTIYTASTDSTIXVWE 582
+ H ++ + T+S DST +W+
Sbjct: 329 -STHSNQKLVLTSSKDSTFRLWD 350
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGC---------WNVTSILKGHTXGV 501
GH + V W + S S D+TA IW+L++G +V + + V
Sbjct: 138 GHKDGV-WHVAADSTRNICASASADQTARIWSLESGACLATYTGHTGSVNCVAISNNCAV 196
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWE 582
+ G+ L + TAS D + +W+
Sbjct: 197 DSTEGSGPASGLLLATASGDESTHIWK 223
>AF047651-1|AAK67207.1| 484|Caenorhabditis elegans Hypothetical
protein C05D2.10a protein.
Length = 484
Score = 41.5 bits (93), Expect = 5e-04
Identities = 24/83 (28%), Positives = 46/83 (55%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L+ H V+ +W+ GQ ++++ S D+TA +W ++ G V +IL GH + +
Sbjct: 274 LTGHRAPVSCCEWLAG--GQ--QMVTASWDRTANVWDVEKG--EVVNILSGHESELNHC- 326
Query: 514 GNYHXDRLTIYTASTDSTIXVWE 582
+ H ++ + T+S DST +W+
Sbjct: 327 -STHSNQKLVLTSSKDSTFRLWD 348
Score = 27.9 bits (59), Expect = 6.7
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 9/87 (10%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGC---------WNVTSILKGHTXGV 501
GH + V W + S S D+TA IW+L++G +V + + V
Sbjct: 136 GHKDGV-WHVAADSTRNICASASADQTARIWSLESGACLATYTGHTGSVNCVAISNNCAV 194
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWE 582
+ G+ L + TAS D + +W+
Sbjct: 195 DSTEGSGPASGLLLATASGDESTHIWK 221
>Z74030-18|CAA98448.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
V+ H+ GH+++V+ + H L++C+ D TA +W ++ GHT V ++
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDV-LVTCARDSTARVWDMRTKAQ--VHCFAGHTNTVADV 316
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLTLH 651
+ + TAS D+T+ +W+ G + S LT+H
Sbjct: 317 VCQSVDPQ--VITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIH 361
>Z73970-6|CAA98247.1| 494|Caenorhabditis elegans Hypothetical
protein D1054.15 protein.
Length = 494
Score = 40.7 bits (91), Expect = 9e-04
Identities = 27/107 (25%), Positives = 50/107 (46%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
V+ H+ GH+++V+ + H L++C+ D TA +W ++ GHT V ++
Sbjct: 260 VIRHYHGHLSAVQALSVHPSLDV-LVTCARDSTARVWDMRTKAQ--VHCFAGHTNTVADV 316
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLTLH 651
+ + TAS D+T+ +W+ G + S LT+H
Sbjct: 317 VCQSVDPQ--VITASHDATVRLWDLAAGRSMCTLTHHKKSVRALTIH 361
>Z73978-3|CAA98293.1| 501|Caenorhabditis elegans Hypothetical
protein ZC302.2a protein.
Length = 501
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH N V + + N Q++ + S D+T +W + G + H+ +T+I +Y+
Sbjct: 295 GHTNYV-FCCSFNPQSSLIASAGFDETVRVWDFKTGL--CVKCIPAHSDPITSI--SYNH 349
Query: 529 DRLTIYTASTDSTIXVWERIXGT 597
D T+ T+S D I VW+ G+
Sbjct: 350 DGNTMATSSYDGCIRVWDAASGS 372
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 448 QNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLH 627
+NG +++ + GHT V+ I +Y L T S D I VW + +T Q+++ H
Sbjct: 199 ENGEFSLVKTISGHTKSVSVIKFSYCGKYLG--TGSADKQIKVWNTV--DMTYLQTLASH 254
>AC024214-18|AAF36083.1| 211|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform b protein.
Length = 211
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 31/78 (39%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNY 522
H+G V V W H G L S S DK +IW Q G W H T +
Sbjct: 57 HSGPVWKVSWAHPKYGGL--LASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAP 114
Query: 523 HXDRLTIYTASTDSTIXV 576
H L + +AS D I +
Sbjct: 115 HQYGLMLASASADGDIGI 132
>AC024214-17|AAF36082.1| 313|Caenorhabditis elegans Nuclear pore
complex protein protein20, isoform a protein.
Length = 313
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/78 (32%), Positives = 31/78 (39%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNY 522
H+G V V W H G L S S DK +IW Q G W H T +
Sbjct: 57 HSGPVWKVSWAHPKYGGL--LASASYDKKVIIWNEQQGRWQKAYEWAAHEASTTCVAFAP 114
Query: 523 HXDRLTIYTASTDSTIXV 576
H L + +AS D I +
Sbjct: 115 HQYGLMLASASADGDIGI 132
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 38.7 bits (86), Expect = 0.004
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Frame = +1
Query: 349 GHVNSVKWI-HNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
GH V + + H G+ ++S + D IW QN L GH V+++ +H
Sbjct: 183 GHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQNK--TCVQTLDGHAQNVSSVC--FH 238
Query: 526 XDRLTIYTASTDSTIXVW 579
+ I T S DST+ +W
Sbjct: 239 PELPLIITGSEDSTVRLW 256
Score = 35.9 bits (79), Expect = 0.025
Identities = 28/93 (30%), Positives = 41/93 (44%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 483
N T +RV H+ ++ S+ +H ++S S D +W N W + +
Sbjct: 85 NYNTLERVHQFEAHSDYLRSLV-VHP---TLPYVISSSDDMLVKMWDWDNK-WAMKQSFE 139
Query: 484 GHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
GHT V I N D T TAS D T+ VW+
Sbjct: 140 GHTHYVMQIAIN-PKDNNTFATASLDKTVKVWQ 171
Score = 35.1 bits (77), Expect = 0.044
Identities = 22/79 (27%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH- 525
GH + V I + + S+DKT +W + N T L+GH GV N YH
Sbjct: 140 GHTHYVMQIAINPKDNNTFATASLDKTVKVWQFGSNVPNFT--LEGHEKGV-NCVDYYHG 196
Query: 526 XDRLTIYTASTDSTIXVWE 582
++ I + + D + +W+
Sbjct: 197 GEKPYIISGADDHLVKIWD 215
>AF000265-5|AAK68197.1| 331|Caenorhabditis elegans Hypothetical
protein C18E3.5 protein.
Length = 331
Score = 37.5 bits (83), Expect = 0.008
Identities = 25/86 (29%), Positives = 41/86 (47%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXG 498
+ VL H G + VK+ N ++ L+S DKT +W ++ G + K HT
Sbjct: 70 ENFAVLKGHKGAIMEVKF----NADSSHLVSAGTDKTVRVWDMETG--SCIRNFKSHTDI 123
Query: 499 VTNIYGNYHXDRLTIYTASTDSTIXV 576
V ++ N ++ I +AS D T+ V
Sbjct: 124 VNSVDVNRRGPQM-ICSASDDGTVMV 148
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/70 (30%), Positives = 30/70 (42%), Gaps = 2/70 (2%)
Frame = +1
Query: 217 CNRKPEVVXWN--YDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNG 390
C + V +N D +IC G N + V D D VLS H + S+ HN N
Sbjct: 162 CKYQQTAVTFNDAADNVICGGIDNQIKVWDMLRN--DVRYVLSGHRDTITSLSVSHNGNF 219
Query: 391 QTTELLSCSV 420
+ + CS+
Sbjct: 220 LLSNSMDCSL 229
>Z79757-3|CAC42307.1| 585|Caenorhabditis elegans Hypothetical
protein F55B12.3b protein.
Length = 585
Score = 36.7 bits (81), Expect = 0.014
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 220 NRKPEVVXWNYDGIICYGACNAVV-VCD-PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQ 393
NR ++ + I+C G+ + + V D + ++ V +L HT + ++ N
Sbjct: 417 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNI--- 473
Query: 394 TTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIX 573
L+SC+ D +W + G +L GH +T++ R + T+S D T+
Sbjct: 474 ---LVSCNADSHVRVWDIHEG--TCVHMLSGHRSAITSL---QWFGRNMVATSSDDGTVK 525
Query: 574 VWERIXGTVTLKQSISLHSG 633
+W+ G + ++ ++L SG
Sbjct: 526 LWDIERGAL-IRDLVTLDSG 544
Score = 36.3 bits (80), Expect = 0.019
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
VL H HV + IH+ L++ S D T +W + G V L GHT GV
Sbjct: 248 VLRGHEDHVITCMQIHDD-----VLVTGSDDNTLKVWCIDKG--EVMYTLVGHTGGVWT- 299
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXGTV 600
I + STD T+ VW + G++
Sbjct: 300 -SQISQCGRYIVSGSTDRTVKVWSTVDGSL 328
>Z79757-2|CAB02129.2| 587|Caenorhabditis elegans Hypothetical
protein F55B12.3a protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.014
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 220 NRKPEVVXWNYDGIICYGACNAVV-VCD-PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQ 393
NR ++ + I+C G+ + + V D + ++ V +L HT + ++ N
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNI--- 475
Query: 394 TTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIX 573
L+SC+ D +W + G +L GH +T++ R + T+S D T+
Sbjct: 476 ---LVSCNADSHVRVWDIHEG--TCVHMLSGHRSAITSL---QWFGRNMVATSSDDGTVK 527
Query: 574 VWERIXGTVTLKQSISLHSG 633
+W+ G + ++ ++L SG
Sbjct: 528 LWDIERGAL-IRDLVTLDSG 546
Score = 36.3 bits (80), Expect = 0.019
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
VL H HV + IH+ L++ S D T +W + G V L GHT GV
Sbjct: 250 VLRGHEDHVITCMQIHDD-----VLVTGSDDNTLKVWCIDKG--EVMYTLVGHTGGVWT- 301
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXGTV 600
I + STD T+ VW + G++
Sbjct: 302 -SQISQCGRYIVSGSTDRTVKVWSTVDGSL 330
>AF020788-1|AAC47809.1| 587|Caenorhabditis elegans SEL-10 protein.
Length = 587
Score = 36.7 bits (81), Expect = 0.014
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 2/140 (1%)
Frame = +1
Query: 220 NRKPEVVXWNYDGIICYGACNAVV-VCD-PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQ 393
NR ++ + I+C G+ + + V D + ++ V +L HT + ++ N
Sbjct: 419 NRVYSLLFESERSIVCSGSLDTSIRVWDFTRPEGQECVALLQGHTSLTSGMQLRGNI--- 475
Query: 394 TTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIX 573
L+SC+ D +W + G +L GH +T++ R + T+S D T+
Sbjct: 476 ---LVSCNADSHVRVWDIHEG--TCVHMLSGHRSAITSL---QWFGRNMVATSSDDGTVK 527
Query: 574 VWERIXGTVTLKQSISLHSG 633
+W+ G + ++ ++L SG
Sbjct: 528 LWDIERGAL-IRDLVTLDSG 546
Score = 36.3 bits (80), Expect = 0.019
Identities = 28/90 (31%), Positives = 39/90 (43%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
VL H HV + IH+ L++ S D T +W + G V L GHT GV
Sbjct: 250 VLRGHEDHVITCMQIHDD-----VLVTGSDDNTLKVWCIDKG--EVMYTLVGHTGGVWT- 301
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXGTV 600
I + STD T+ VW + G++
Sbjct: 302 -SQISQCGRYIVSGSTDRTVKVWSTVDGSL 330
>Z69664-1|CAA93514.1| 325|Caenorhabditis elegans Hypothetical
protein K04D7.1 protein.
Length = 325
Score = 36.3 bits (80), Expect = 0.019
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 466 VTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+T L+GHT VT I D+ T+ ++S D TI VW+
Sbjct: 8 LTGTLEGHTGWVTQIATYTRNDKTTVLSSSRDKTILVWD 46
Score = 30.7 bits (66), Expect = 0.94
Identities = 29/103 (28%), Positives = 46/103 (44%), Gaps = 7/103 (6%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL-------QNGCWNVTSILKGHT 492
L HTG V + + N +TT +LS S DKT ++W + + L GH
Sbjct: 12 LEGHTGWVTQIA-TYTRNDKTT-VLSSSRDKTILVWDVDSVAPVDEGPIGRPVRSLTGHN 69
Query: 493 XGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSIS 621
V+++ D + S D T+ +W+ G V+ +Q IS
Sbjct: 70 HFVSDVV--ISSDGQFALSGSWDKTLRLWDLNQG-VSTRQFIS 109
>AC006708-11|AAF60426.2| 1019|Caenorhabditis elegans Hypothetical
protein Y110A7A.9a protein.
Length = 1019
Score = 35.9 bits (79), Expect = 0.025
Identities = 14/45 (31%), Positives = 24/45 (53%)
Frame = +1
Query: 238 VXWNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKW 372
+ WN G+I YG+ N + V D + R+ + HH +N ++W
Sbjct: 18 IDWNDGGLIAYGSHNLIFVVDVMQ--YKRIQSIEHHQSAINIIRW 60
>Z78544-3|CAB01760.1| 395|Caenorhabditis elegans Hypothetical
protein K04G11.4 protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.033
Identities = 24/83 (28%), Positives = 39/83 (46%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH N V + N T + S S D+T IW +NG N + GH V+++ ++
Sbjct: 188 GHTNYV-FCCCFNPSGTLIASGSFDETIRIWCARNG--NTIFSIPGHEDPVSSVC--FNR 242
Query: 529 DRLTIYTASTDSTIXVWERIXGT 597
D + + S D + +W+ GT
Sbjct: 243 DGAYLASGSYDGIVRIWDSTTGT 265
>AL110501-4|CAB54510.1| 368|Caenorhabditis elegans Hypothetical
protein Y79H2A.6 protein.
Length = 368
Score = 35.1 bits (77), Expect = 0.044
Identities = 21/81 (25%), Positives = 32/81 (39%), Gaps = 2/81 (2%)
Frame = +1
Query: 244 WNYDG--IICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCS 417
WN D I + N + + + + LS H V + W +T ++SCS
Sbjct: 22 WNKDRTQIAVSASSNDIHIFEWRNGDWQSIHTLSEHDLPVTGLDW----GTKTNRIVSCS 77
Query: 418 VDKTAVIWTLQNGCWNVTSIL 480
DK A +WT W +L
Sbjct: 78 QDKNAFVWTFDKNVWKPELVL 98
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.077
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 397 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
T + SCS D T +W + G + LKGHT V +I + +L + S+D +I +
Sbjct: 119 TIMASCSEDATIKVWDYETG--QLERTLKGHTDAVNDIAIDAAGKQLV--SCSSDLSIKL 174
Query: 577 WE 582
W+
Sbjct: 175 WD 176
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 34.3 bits (75), Expect = 0.077
Identities = 20/62 (32%), Positives = 32/62 (51%)
Frame = +1
Query: 397 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
T + SCS D T +W + G + LKGHT V +I + +L + S+D +I +
Sbjct: 119 TIMASCSEDATIKVWDYETG--QLERTLKGHTDAVNDIAIDAAGKQLV--SCSSDLSIKL 174
Query: 577 WE 582
W+
Sbjct: 175 WD 176
>AC024770-5|AAK84605.2| 684|Caenorhabditis elegans Hypothetical
protein Y39H10A.6 protein.
Length = 684
Score = 34.3 bits (75), Expect = 0.077
Identities = 15/35 (42%), Positives = 20/35 (57%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 447
H GHVN+V W + T L+SC D T +W+L
Sbjct: 564 HRGHVNAVAW---NPADPTMLVSCGADATIRVWSL 595
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 466 VTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLT 645
+T L GHT + ++ YH + +AS+DST+ +WE G ++ + SG+ T
Sbjct: 458 LTETLTGHTDAIWSVA--YHSSNSRLVSASSDSTVRLWEPGNGEPLIRTIGAPKSGILPT 515
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/60 (30%), Positives = 31/60 (51%)
Frame = +1
Query: 466 VTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLT 645
+T L GHT + ++ YH + +AS+DST+ +WE G ++ + SG+ T
Sbjct: 458 LTETLTGHTDAIWSVA--YHSSNSRLVSASSDSTVRLWEPGNGEPLIRTIGAPKSGILPT 515
>U23412-5|AAK21467.2| 492|Caenorhabditis elegans Hypothetical
protein T10F2.4 protein.
Length = 492
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 406 LSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
L+ +DKT V++ + V KGH + + H D +T +AS DS I VW
Sbjct: 225 LTGGIDKTVVLYDYEKE--QVMQTFKGHNKKINAVV--LHPDNITAISASADSHIRVW 278
>AC024867-3|AAK68601.2| 327|Caenorhabditis elegans Eukaryotic
initiation factor protein3.I protein.
Length = 327
Score = 33.9 bits (74), Expect = 0.10
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 1/83 (1%)
Frame = +1
Query: 349 GHVNSVKWIH-NHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
GH ++ + N G T SC+ DK +W +NG GH V +I +
Sbjct: 8 GHERALTRVRFNREGDLT--FSCAKDKKPCVWYTENG--ERIGSYDGHNGAVWDI--DVS 61
Query: 526 XDRLTIYTASTDSTIXVWERIXG 594
D TAS D T+ +W+ G
Sbjct: 62 WDTTKCVTASGDLTVKIWDAELG 84
>Z80216-3|CAB02280.1| 373|Caenorhabditis elegans Hypothetical
protein F10G8.3 protein.
Length = 373
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/45 (35%), Positives = 26/45 (57%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN 453
++V V+ H G V + WI+ +N Q L++ S DKT W ++N
Sbjct: 121 NQVAVVGTHDGPVKTCHWINGNNYQC--LMTGSFDKTLRFWDMKN 163
>Z99278-1|CAB16490.1| 793|Caenorhabditis elegans Hypothetical
protein Y53C12B.1 protein.
Length = 793
Score = 32.7 bits (71), Expect = 0.23
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL-----QNGCWNVTSI--LKGHTXGVTN 507
GH SV + + T+ L SCS D + + W L + C + + GH VT
Sbjct: 358 GHTESVLSVVSPTWDTSLLASCSKDNSIIFWRLVTSPENDSCSTLVPVAAATGHANTVTA 417
Query: 508 IYGNYHXDRLTIYTASTDSTIXVW 579
+ + + + STD TI +W
Sbjct: 418 LAISNTGRAPFLASVSTDCTIKLW 441
Score = 28.3 bits (60), Expect = 5.0
Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL-QNGCWNVTSILKGHTXGVTNI 510
LS H V VK+ N + +L SCS D T IW + + C S GH+ V +
Sbjct: 519 LSGHRRGVGDVKFAKNSH----KLASCSGDMTIKIWNISEKSCLQTIS---GHSCAVFRV 571
Query: 511 YGNYHXDRLTIYTASTDSTIXVW 579
+ + + +A + I +W
Sbjct: 572 I--FARNDSQLISADSAGIIKIW 592
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 32.3 bits (70), Expect = 0.31
Identities = 25/95 (26%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWN--VTSILKGHTXGVTNIYGN 519
TGH SV+ + +T L SCS D + +W ++ + V ++ K H V I N
Sbjct: 272 TGHKKSVEDLAWSPTETGLLASCSADGSIKLWDTRSAPKDACVCTVQKAHESDVNVISWN 331
Query: 520 YHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISL 624
H + I + D + +W T+ Q ++L
Sbjct: 332 RHEN--LIVSGGDDGELKIWS--LKTIQFGQPVAL 362
>AL021481-1|CAA16333.1| 363|Caenorhabditis elegans Hypothetical
protein Y43F4B.4 protein.
Length = 363
Score = 31.5 bits (68), Expect = 0.54
Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQ-NGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+ +C+ D T IW + +G W ++ K H V + + + T S D TI +W
Sbjct: 32 MATCASDMTMAIWDRKPDGNWRRSAHWKCHGGAVWRVIWAHPEFGQIVATCSYDRTIVIW 91
Query: 580 E 582
E
Sbjct: 92 E 92
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/36 (44%), Positives = 19/36 (52%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
H G V V W H GQ + +CS D+T VIW Q
Sbjct: 61 HGGAVWRVIWAHPEFGQI--VATCSYDRTIVIWEEQ 94
>U28730-7|AAA68258.2| 665|Caenorhabditis elegans Abnormal cell
lineage protein 23 protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 421 DKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
D T IW ++ ++ + IL GHT V + D I + S+D+T+ VW+
Sbjct: 241 DNTIKIWDRKD--YSCSRILSGHTGSVLCL----QYDNRVIISGSSDATVRVWD 288
>AF275253-1|AAG28037.1| 665|Caenorhabditis elegans LIN-23 protein.
Length = 665
Score = 30.3 bits (65), Expect = 1.2
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 421 DKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
D T IW ++ ++ + IL GHT V + D I + S+D+T+ VW+
Sbjct: 241 DNTIKIWDRKD--YSCSRILSGHTGSVLCL----QYDNRVIISGSSDATVRVWD 288
>Z81097-15|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 29.9 bits (64), Expect = 1.6
Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Frame = +1
Query: 310 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC-SVDKTAVIWTLQNGCWNVTSILKG 486
++K ++T + H T VN + + N + +L+ SVDKT +W ++N + + LK
Sbjct: 253 QSKPQLTAVGH-TAEVNCITF----NPFSEYILATGSVDKTVALWDMRNMRKKMYT-LKH 306
Query: 487 HTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
H + + + H + + + ++ +D + VW+
Sbjct: 307 HNDEIFQVSFSPHYETV-LASSGSDDRVIVWD 337
>U80447-5|AAB37809.1| 439|Caenorhabditis elegans Temporarily
assigned gene nameprotein 345 protein.
Length = 439
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +1
Query: 310 KTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
KTK + + H V++V+W ++G SCS D T V W L+
Sbjct: 267 KTKVPMVTIGGHRDKVSAVEWCPWNSGHA---FSCSWDHTIVEWDLE 310
>Z66561-2|CAA91460.1| 331|Caenorhabditis elegans Hypothetical
protein F08G12.2 protein.
Length = 331
Score = 29.1 bits (62), Expect = 2.9
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXG 498
+ + + H+G V +K+ + ++ L+SC DK+ +W ++ G + HT
Sbjct: 72 ENFSTIKGHSGAVMDLKFTTD----SSSLVSCGTDKSVRVWDMETG--TCARRFRTHTDF 125
Query: 499 VTNIYGNYHXDRLTIYTASTDSTIXV 576
V ++ + L + +AS D T V
Sbjct: 126 VNAVHPSRRGVTL-VASASDDGTCRV 150
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 29.1 bits (62), Expect = 2.9
Identities = 23/103 (22%), Positives = 39/103 (37%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNY 522
+ GH V ++ LSCS+D +W + + V GH V + +
Sbjct: 271 YRGHNKGVNFLQWFPKSAHLFLSCSMDTKIKLWEVYDR-QRVVRTYAGHKLPVREV--AF 327
Query: 523 HXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLTLH 651
+ + +AS D + +W+ G V + H CL H
Sbjct: 328 NNEGTEFLSASFDRYVKLWDTETGQVKQRFHTG-HVPYCLKYH 369
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L + S DKT +W L+N + S + H + + + H + + + ++ TD + VW+
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FESHRDEIFQVQWSPHNETI-LASSGTDKRLHVWD 338
>AL132904-13|CAC35846.4| 778|Caenorhabditis elegans Hypothetical
protein Y111B2A.17 protein.
Length = 778
Score = 28.7 bits (61), Expect = 3.8
Identities = 25/97 (25%), Positives = 38/97 (39%), Gaps = 3/97 (3%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG---CWNVTSILKGHTXGVTNIY 513
H V + W N T LL+ S D+TA ++T +NG ++ + I+
Sbjct: 607 HQLTVTQIAW----NPSGTRLLTVSRDRTAKLYTEKNGEVDGFDYDCVWTSGKQHTRIIW 662
Query: 514 GNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISL 624
D TAS D + VW G K ++ L
Sbjct: 663 ACDWIDDEHFVTASRDQKVIVWAESAGQTAPKATVKL 699
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCW 462
V+ H V+S W +++G+ LL+ S DKT +IW + W
Sbjct: 282 VMQGHDDWVHSTVW--SNDGRV--LLTASSDKTCIIWKEIDNLW 321
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L + S DKT +W L+N + S + H + + + H + + + ++ TD + VW+
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FESHRDEIFQVQWSPHNETI-LASSGTDKRLHVWD 338
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/60 (25%), Positives = 30/60 (50%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L + S DKT +W L+N + S + H + + + H + + + ++ TD + VW+
Sbjct: 281 LATGSADKTVALWDLRNLRMKLHS-FESHRDEIFQVQWSPHNETI-LASSGTDKRLHVWD 338
>AF101309-3|AAN60514.1| 760|Caenorhabditis elegans Hypothetical
protein H24G06.1c protein.
Length = 760
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
++L GH + +I + +L +YTA++D ++ +W+
Sbjct: 564 AVLDGHQSAIKSIKFASNNGQLHLYTAASDRSLIIWK 600
>AF101309-2|AAL32230.1| 1601|Caenorhabditis elegans Hypothetical
protein H24G06.1b protein.
Length = 1601
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
++L GH + +I + +L +YTA++D ++ +W+
Sbjct: 564 AVLDGHQSAIKSIKFASNNGQLHLYTAASDRSLIIWK 600
>AF101309-1|AAL32229.1| 1680|Caenorhabditis elegans Hypothetical
protein H24G06.1a protein.
Length = 1680
Score = 28.7 bits (61), Expect = 3.8
Identities = 10/37 (27%), Positives = 23/37 (62%)
Frame = +1
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
++L GH + +I + +L +YTA++D ++ +W+
Sbjct: 564 AVLDGHQSAIKSIKFASNNGQLHLYTAASDRSLIIWK 600
>AC024791-30|AAL32250.2| 2460|Caenorhabditis elegans Hypothetical
protein Y47G6A.29 protein.
Length = 2460
Score = 28.7 bits (61), Expect = 3.8
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -1
Query: 324 SIFSFFIRITNNNSITGTVTNYPVVIPVYHFRFAVTG 214
++ + I +N ITG N+ +++ + F F VTG
Sbjct: 2334 AVAKYRINRATSNGITGVQANWSILLDEHFFEFCVTG 2370
>Z49912-7|CAI70412.1| 554|Caenorhabditis elegans Hypothetical
protein T24F1.3b protein.
Length = 554
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -2
Query: 503 VTPXVCPLRILVTFQQPFCNVQMTAVLSTEQESNSVVW 390
++ CPL++++ +Q P C A++ E ++ ++W
Sbjct: 406 ISDDACPLKVVLNWQSPHCG---RALVLQENDTGDILW 440
>Z49912-6|CAA90137.1| 615|Caenorhabditis elegans Hypothetical
protein T24F1.3a protein.
Length = 615
Score = 28.3 bits (60), Expect = 5.0
Identities = 9/38 (23%), Positives = 22/38 (57%)
Frame = -2
Query: 503 VTPXVCPLRILVTFQQPFCNVQMTAVLSTEQESNSVVW 390
++ CPL++++ +Q P C A++ E ++ ++W
Sbjct: 467 ISDDACPLKVVLNWQSPHCG---RALVLQENDTGDILW 501
>Z50794-1|CAA90656.2| 179|Caenorhabditis elegans Hypothetical
protein F59F5.2 protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNH 384
+EKTKD +T +S G ++ K+ HN+
Sbjct: 91 SEKTKDPITEMSSQFGTISISKFYHNY 117
>AF303254-1|AAG50212.1| 179|Caenorhabditis elegans XL153 protein.
Length = 179
Score = 27.9 bits (59), Expect = 6.7
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNH 384
+EKTKD +T +S G ++ K+ HN+
Sbjct: 91 SEKTKDPITEMSSQFGTISISKFYHNY 117
>U67947-2|AAB07558.1| 204|Caenorhabditis elegans Hypothetical
protein H03E18.2 protein.
Length = 204
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = -2
Query: 437 MTAVLSTEQESNSVVWPL*LC-IHFTEFTCPVW*LSTVTLSLVFSFGSQTT 288
++ V+S Q + V L C + + +W + TVT++LVFS+ S +T
Sbjct: 49 VSGVVSIAQAISHFVLMLYDCDLRMIDMAFAIWPIVTVTIALVFSYFSYST 99
>AF101313-1|AAC69223.1| 1802|Caenorhabditis elegans Abc transporter
family protein 4 protein.
Length = 1802
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/47 (34%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Frame = -1
Query: 408 EQLCCLAIMIVYPFYRVYVSCMVTQYCY-SIFSFFIRITNNNSITGT 271
E LC ++VY +R Y SC + Y S ++ IR+ N N T
Sbjct: 1644 EALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRLKNRNDAEKT 1690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,700,041
Number of Sequences: 27780
Number of extensions: 244886
Number of successful extensions: 786
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 734
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 776
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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