Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_J05
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g49540.1 68414.m05553 transducin family protein / WD-40 repea... 54 1e-07
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 47 1e-05
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 42 3e-04
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 42 5e-04
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 41 6e-04
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 41 6e-04
At2g30050.1 68415.m03654 transducin family protein / WD-40 repea... 41 8e-04
At3g18860.2 68416.m02396 transducin family protein / WD-40 repea... 40 0.001
At3g18860.1 68416.m02395 transducin family protein / WD-40 repea... 40 0.001
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 39 0.003
At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 ... 39 0.003
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 38 0.004
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 38 0.004
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 38 0.004
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 38 0.004
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 38 0.004
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 38 0.006
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 37 0.013
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 37 0.013
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 36 0.018
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 36 0.024
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 36 0.024
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 36 0.031
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 36 0.031
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 35 0.041
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 35 0.041
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 35 0.041
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 35 0.054
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 35 0.054
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 35 0.054
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 34 0.072
At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5 ... 34 0.072
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 34 0.072
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 34 0.095
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 33 0.17
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 33 0.17
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 33 0.17
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 33 0.17
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 32 0.29
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 32 0.38
At3g01340.1 68416.m00051 protein transport protein SEC13 family ... 32 0.38
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 31 0.51
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 31 0.51
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 31 0.51
At1g76260.1 68414.m08855 transducin family protein / WD-40 repea... 31 0.51
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 31 0.67
At1g47610.1 68414.m05288 transducin family protein / WD-40 repea... 31 0.67
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 31 0.88
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 31 0.88
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 31 0.88
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 31 0.88
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 31 0.88
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 31 0.88
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 31 0.88
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 31 0.88
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 30 1.2
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 30 1.2
At3g20740.1 68416.m02624 fertilization-independent endosperm pro... 30 1.2
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 30 1.2
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 30 1.2
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 30 1.2
At1g18050.1 68414.m02232 SWAP (Suppressor-of-White-APricot)/surp... 30 1.2
At5g15550.2 68418.m01821 transducin family protein / WD-40 repea... 30 1.5
At5g15550.1 68418.m01820 transducin family protein / WD-40 repea... 30 1.5
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 30 1.5
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 30 1.5
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 30 1.5
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 29 2.0
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 29 2.0
At4g15396.1 68417.m02353 cytochrome P450-related similar to Cyto... 29 2.0
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 29 2.0
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 29 2.0
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 29 2.0
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 29 2.0
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 29 2.0
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 29 2.0
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 29 2.0
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 29 2.7
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 29 2.7
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 29 2.7
At5g58760.1 68418.m07360 transducin family protein / WD-40 repea... 29 3.6
At4g13510.1 68417.m02107 ammonium transporter 1, member 1 (AMT1.... 29 3.6
At3g22770.1 68416.m02871 F-box family protein-related contains T... 29 3.6
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 29 3.6
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 28 4.7
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 28 4.7
At3g13290.1 68416.m01673 transducin family protein / WD-40 repea... 28 4.7
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 28 4.7
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 28 6.2
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 28 6.2
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 28 6.2
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 28 6.2
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 28 6.2
At3g44020.1 68416.m04713 thylakoid lumenal P17.1 protein contain... 28 6.2
At1g54790.2 68414.m06248 GDSL-motif lipase/hydrolase family prot... 28 6.2
At1g54790.1 68414.m06247 GDSL-motif lipase/hydrolase family prot... 28 6.2
At1g10380.1 68414.m01169 expressed protein 28 6.2
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 27 8.2
>At1g49540.1 68414.m05553 transducin family protein / WD-40 repeat
family protein similar to signal transducer and
activator of transcription interacting protein 1
(GI:15929722) {Mus musculus}; similar to hypothetical
protein GB:AAD43147 GI:5430747 from (Arabidopsis
thaliana); contains Pfam PF00400: WD domain, G-beta
repeat (11 copies, 2 weak)
Length = 840
Score = 53.6 bits (123), Expect = 1e-07
Identities = 44/147 (29%), Positives = 62/147 (42%), Gaps = 13/147 (8%)
Frame = +1
Query: 181 KVSVXQVYTSVACNRKPEVVXWNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVN 360
KV +V+ CNR V W G++ +GA NAV V P KT +T L H VN
Sbjct: 6 KVEAKRVFIGAGCNRVVNNVSWGASGLVSFGAQNAVAVFCP--KTAQILTTLPGHKASVN 63
Query: 361 SVKWIHNHNG-------QTTELLSCSVDKTAVIW---TLQNG-CW-NVTSILKGHTXGVT 504
W+ LLS D ++W TL N W +V + H GVT
Sbjct: 64 CTHWLPTSKFAFKAKKLDRQYLLSGDSDGIIILWELSTLNNDQQWRHVLQLPLSHKKGVT 123
Query: 505 NIYGNYHXDRLTIY-TASTDSTIXVWE 582
I + ++ +AS+D + VW+
Sbjct: 124 CITAYMVSETDAMFASASSDGVVNVWD 150
Score = 28.3 bits (60), Expect = 4.7
Identities = 18/71 (25%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
Frame = +1
Query: 385 NGQTTELLSCSVDKTAVIW--TLQNGCW-NVTSILKGHTXGVTNIYGNYHXDRLTIYTAS 555
N Q +LS S+DKT +IW + G W NV + + + G++ + L+I
Sbjct: 326 NHQPLSILSASMDKTMMIWRPEKKTGVWVNVVCVGELSHCALGFYGGHWSPNSLSILAHG 385
Query: 556 TDSTIXVWERI 588
+W +
Sbjct: 386 YGGAFHLWRNV 396
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 3/96 (3%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGCWNVTSI-LKGHTXGVTNI-Y 513
H V+SV W N NG T+L S SVD+TA IW ++ +G + LKGHT V + +
Sbjct: 19 HKKKVHSVAW--NSNG--TKLASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCW 74
Query: 514 GNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSIS 621
H D + TAS D ++ +W+ G T + +S
Sbjct: 75 DPKHSD--LVATASGDKSVRLWDARSGKCTQQVELS 108
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 42.3 bits (95), Expect = 3e-04
Identities = 27/96 (28%), Positives = 46/96 (47%)
Frame = +1
Query: 367 KWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY 546
KWI + L++ S D TA +W++ G + ++L H V ++ Y I
Sbjct: 1023 KWIRSIRMVEDTLITGSDDWTARVWSVSRG--SCDAVLACHAGPVQSV--EYSPFDKGII 1078
Query: 547 TASTDSTIXVWERIXGTVTLKQSISLHSGLCLTLHA 654
T S D + WE G + ++I+LHS L+++A
Sbjct: 1079 TGSADGLLRFWENDEGGIKCVKNITLHSSSILSINA 1114
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 41.5 bits (93), Expect = 5e-04
Identities = 26/94 (27%), Positives = 49/94 (52%)
Frame = +1
Query: 301 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSIL 480
P K + L HT ++ VK+ ++ N L S SVDKT ++W+ N +++
Sbjct: 28 PIYKPYRHLKTLEGHTAAISCVKFSNDGN----LLASASVDKTMILWSATN--YSLIHRY 81
Query: 481 KGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+GH+ G++++ + D +AS D T+ +W+
Sbjct: 82 EGHSSGISDL--AWSSDSHYTCSASDDCTLRIWD 113
Score = 39.9 bits (89), Expect = 0.001
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH N V + N N + ++S S D+T IW ++ G ++K H+ +++++ ++
Sbjct: 126 GHTNFVFCV-NFNPPSNLIVSGSFDETIRIWEVKTG--KCVRMIKAHSMPISSVH--FNR 180
Query: 529 DRLTIYTASTDSTIXVWERIXGT 597
D I +AS D + +W+ GT
Sbjct: 181 DGSLIVSASHDGSCKIWDAKEGT 203
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 41.1 bits (92), Expect = 6e-04
Identities = 31/91 (34%), Positives = 43/91 (47%), Gaps = 7/91 (7%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYG-- 516
H G VN VKW + G L SCS D TA IW ++ + L+ HT + I
Sbjct: 447 HQGEVNCVKW--DPTGSL--LASCSDDSTAKIWNIKQSTF--VHDLREHTKEIYTIRWSP 500
Query: 517 -----NYHXDRLTIYTASTDSTIXVWERIXG 594
N +LT+ +AS DST+ +W+ G
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAELG 531
Score = 37.1 bits (82), Expect = 0.010
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 2/75 (2%)
Frame = +1
Query: 244 WNYDG-IICYGACNAVV-VCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCS 417
WN +G ++ G+C+ + N + ++ LS H G + S+KW N + LL+ S
Sbjct: 332 WNGEGTLLATGSCDGQARIWTLNGEL---ISTLSKHKGPIFSLKW----NKKGDYLLTGS 384
Query: 418 VDKTAVIWTLQNGCW 462
VD+TAV+W ++ W
Sbjct: 385 VDRTAVVWDVKAEEW 399
Score = 36.3 bits (80), Expect = 0.018
Identities = 30/83 (36%), Positives = 37/83 (44%)
Frame = +1
Query: 385 NGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDS 564
NG+ T L + S D A IWTL NG + S L H + ++ N D L T S D
Sbjct: 333 NGEGTLLATGSCDGQARIWTL-NG--ELISTLSKHKGPIFSLKWNKKGDYL--LTGSVDR 387
Query: 565 TIXVWERIXGTVTLKQSISLHSG 633
T VW+ KQ HSG
Sbjct: 388 TAVVWD--VKAEEWKQQFEFHSG 408
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 41.1 bits (92), Expect = 6e-04
Identities = 34/123 (27%), Positives = 52/123 (42%), Gaps = 8/123 (6%)
Frame = +1
Query: 238 VXWNYDG--IICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLS 411
V WN G + G +V + + + D ++ TGH VK + H L S
Sbjct: 98 VSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTIAVLTGHSEDVKMVLWHPTMDV-LFS 156
Query: 412 CSVDKTAVIWTL--QNGCWNVTSIL----KGHTXGVTNIYGNYHXDRLTIYTASTDSTIX 573
CS D T IW ++G +N L GH+ V +I N D++ T S D +
Sbjct: 157 CSYDNTIKIWCSEDEDGDYNCVQTLSELNNGHSSTVWSISFNAAGDKMV--TCSDDLAVK 214
Query: 574 VWE 582
+W+
Sbjct: 215 IWK 217
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/60 (33%), Positives = 26/60 (43%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXG 498
+ V L HT V +V W +G + SCS DKT IW Q+ + GH G
Sbjct: 11 EEVQKLEGHTDRVWNVAWNPAADGV---IASCSADKTVRIWE-QSSLTRSWTCKLGHRLG 66
>At2g30050.1 68415.m03654 transducin family protein / WD-40 repeat
family protein similar to SEC13-related protein
(SP:P55735) [Homo sapiens]
Length = 302
Score = 40.7 bits (91), Expect = 8e-04
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 1/102 (0%)
Frame = +1
Query: 277 CNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN- 453
C + N ++ L+ H G V V W H G L SCS D ++W N
Sbjct: 33 CTIKITGVSNNGGSQQLATLTGHRGPVWEVAWAHPKYGSI--LASCSYDGQVILWKEGNQ 90
Query: 454 GCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
W + H V +I H L++ S+D I V+
Sbjct: 91 NQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNISVF 132
Score = 33.5 bits (73), Expect = 0.13
Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 4/64 (6%)
Frame = +1
Query: 400 ELLSCSVDKTAVIWTLQNGCWNVTSI--LKGHTXGVTNI--YGNYHXDRLTIYTASTDST 567
+L S D T +W L NG W + L+ HT V ++ N + TI + S D
Sbjct: 178 KLASGGCDNTVKVWKLANGSWKMDCFPALQKHTDWVRDVAWAPNLGLPKSTIASGSQDGK 237
Query: 568 IXVW 579
+ +W
Sbjct: 238 VIIW 241
Score = 32.7 bits (71), Expect = 0.22
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSC-SVDKTAVIWTLQ-NGCWNVTSI 477
N+ T+D V + H VNS+ W + G + L+C S D ++T + +G W+ + I
Sbjct: 91 NQWTQDHV--FTDHKSSVNSIAWAPHDIGLS---LACGSSDGNISVFTARADGGWDTSRI 145
Query: 478 LKGHTXGVTNI 510
+ H GVT++
Sbjct: 146 DQAHPVGVTSV 156
>At3g18860.2 68416.m02396 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 298 DPNEKTK-DRVTVLSHHTGHVNSVKWIHNHNGQTT-ELLSCSVDKTAVIWTLQNGCWNVT 471
DP++K K +L HT V + WI + L+S S+D +W L NG N+
Sbjct: 49 DPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNG-ENIQ 107
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+ LKGH VT + D I ++S D T+ W
Sbjct: 108 T-LKGHQMQVTGV----AIDNEDIVSSSVDQTLKRW 138
>At3g18860.1 68416.m02395 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to phospholipase a-2-activating protein
SP:P27612 from [Mus musculus]
Length = 760
Score = 40.3 bits (90), Expect = 0.001
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +1
Query: 298 DPNEKTK-DRVTVLSHHTGHVNSVKWIHNHNGQTT-ELLSCSVDKTAVIWTLQNGCWNVT 471
DP++K K +L HT V + WI + L+S S+D +W L NG N+
Sbjct: 49 DPSDKRKYTSEKILLGHTSFVGPLAWIPPTDEYPEGRLVSGSMDTFVFVWNLMNG-ENIQ 107
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+ LKGH VT + D I ++S D T+ W
Sbjct: 108 T-LKGHQMQVTGV----AIDNEDIVSSSVDQTLKRW 138
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/78 (28%), Positives = 41/78 (52%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH++ ++ + H+ + ++S S D+T IW Q+ S+L GH V + ++H
Sbjct: 91 GHLDYIRTVQFHH-ENPWIVSASDDQTIRIWNWQSR--TCISVLTGHNHYV--MCASFHP 145
Query: 529 DRLTIYTASTDSTIXVWE 582
+ +AS D T+ VW+
Sbjct: 146 KEDLVVSASLDQTVRVWD 163
>At2g19520.1 68415.m02281 WD-40 repeat protein (MSI4) contains 6 (4
significant) WD-40 repeats (PF0400); identical to WD-40
repeat protein MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 507
Score = 38.7 bits (86), Expect = 0.003
Identities = 22/79 (27%), Positives = 37/79 (46%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH ++V+ + E S D ++W + G VT + K H + + N H
Sbjct: 290 GHEDTVEDVAFSPTSAQEFCSVGDDSCLILWDARTGTNPVTKVEKAHDADLHCVDWNPHD 349
Query: 529 DRLTIYTASTDSTIXVWER 585
D L I T S D+T+ +++R
Sbjct: 350 DNL-ILTGSADNTVRLFDR 367
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 38.3 bits (85), Expect = 0.004
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 2/121 (1%)
Frame = +1
Query: 238 VXWNYDGI-ICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNH-NGQTTELLS 411
V W+ DG + G+ + + C +K + + L+ H + + W H + ++
Sbjct: 157 VAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFVT 216
Query: 412 CSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIX 591
S D A IW + L GHT VT + + D + IYT S D TI +WE
Sbjct: 217 SSKDGDARIWDIT--LKKSIICLSGHTLAVTCV--KWGGDGI-IYTGSQDCTIKMWETTQ 271
Query: 592 G 594
G
Sbjct: 272 G 272
Score = 34.7 bits (76), Expect = 0.054
Identities = 25/95 (26%), Positives = 43/95 (45%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
TGH V ++ + + S S DK+ +W G ++ +GH V + ++
Sbjct: 357 TGHQQLVNHVY-FSPDGKWIASASFDKSVRLWNGITG--QFVTVFRGHVGPVYQV--SWS 411
Query: 526 XDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHS 630
D + + S DST+ +WE T LKQ + H+
Sbjct: 412 ADSRLLLSGSKDSTLKIWE--IRTKKLKQDLPGHA 444
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 38.3 bits (85), Expect = 0.004
Identities = 34/126 (26%), Positives = 54/126 (42%), Gaps = 15/126 (11%)
Frame = +1
Query: 304 NEKTKDRV-TVLSHHTGHVNSVKWIHNH----NGQTTELLSCSVDKTAVIWTLQNGC--- 459
N TK+R+ L H G VN V+W N +G +++ K T + G
Sbjct: 44 NIDTKERLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGS-GTTEFGSGEA 102
Query: 460 -----WNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXG--TVTLKQSI 618
W L+GHT V ++ N+ D + + S D+T+ +W G T L+ +
Sbjct: 103 PDVENWKAVMTLRGHTADVVDL--NWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHL 160
Query: 619 SLHSGL 636
SL G+
Sbjct: 161 SLVKGV 166
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 38.3 bits (85), Expect = 0.004
Identities = 25/82 (30%), Positives = 38/82 (46%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L H VN V + G L++ S D TA +W Q + L+GHT V+ +
Sbjct: 181 LDAHLKGVNCVDYFTG--GDKPYLITGSDDHTAKVWDYQTK--SCVQTLEGHTHNVSAV- 235
Query: 514 GNYHXDRLTIYTASTDSTIXVW 579
++H + I T S D T+ +W
Sbjct: 236 -SFHPELPIIITGSEDGTVRIW 256
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + V + + T S S+D+T IW L + N T L H GV +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LDAHLKGVNCVDYFTGG 197
Query: 529 DRLTIYTASTDSTIXVWE 582
D+ + T S D T VW+
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/78 (28%), Positives = 41/78 (52%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH++ ++ + H+ + ++S S D+T IW Q+ S+L GH V + ++H
Sbjct: 91 GHLDYIRTVQFHH-EYPWIVSASDDQTIRIWNWQSR--TCVSVLTGHNHYV--MCASFHP 145
Query: 529 DRLTIYTASTDSTIXVWE 582
+ +AS D T+ VW+
Sbjct: 146 KEDLVVSASLDQTVRVWD 163
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 38.3 bits (85), Expect = 0.004
Identities = 32/117 (27%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTE--LLSCSVDKTAVIWTLQNGCWNVTSILKGHT 492
++ T LS H H + I + + ++ + + +D TAV++ +G + S L GH+
Sbjct: 207 EKFTQLSSHPLHKTNKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSG--QILSTLTGHS 264
Query: 493 XGVTNIYGNYHXDRLTIYTASTDSTIXVWE-RIXGTVTLKQSISLHSG--LCLTLHA 654
VT+I + D + TAS+D T+ +W G T + ++ HS +T+HA
Sbjct: 265 KKVTSI--KFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHA 319
Score = 33.9 bits (74), Expect = 0.095
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 325 VTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW-TLQNGCWNVTSILKGHTXGV 501
++ L+ H+ V S+K++ G T +L+ S DKT IW ++G + LK H+ V
Sbjct: 257 LSTLTGHSKKVTSIKFV----GDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDHSAEV 312
Query: 502 TNIYGNYHXDRLTIYTASTDST 567
+ H +AS DST
Sbjct: 313 RAV--TVHATNKYFVSASLDST 332
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 37.9 bits (84), Expect = 0.006
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 10/124 (8%)
Frame = +1
Query: 238 VXWNYDGIICYGACN---AVVVCDPNEKTK-DRVTVLSHHTGHVNSVKWIHNHNGQTTEL 405
V WN G C C+ +V + + E + D VL+ HT V V+W + L
Sbjct: 124 VSWNASGS-CLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQW----HPTMDVL 178
Query: 406 LSCSVDKTAVIWTLQ--NGCWNVTSIL----KGHTXGVTNIYGNYHXDRLTIYTASTDST 567
SCS D T +W + +G + L GH+ V +I N D++ T S D T
Sbjct: 179 FSCSYDNTIKVWWSEDDDGEYQCVQTLGESNNGHSSTVWSISFNAAGDKMV--TCSDDLT 236
Query: 568 IXVW 579
+ +W
Sbjct: 237 LKIW 240
Score = 36.7 bits (81), Expect = 0.013
Identities = 29/90 (32%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 328 TVLSH-HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVT 504
TVL HT V S W + +GQ L + S D T IW + S L+GH V
Sbjct: 67 TVLEETHTRTVRSCAW--SPSGQL--LATASFDGTTGIWKNYGSEFECISTLEGHENEVK 122
Query: 505 NIYGNYHXDRLTIYTASTDSTIXVWERIXG 594
++ N L T S D ++ +WE + G
Sbjct: 123 SVSWNASGSCLA--TCSRDKSVWIWEVLEG 150
Score = 35.9 bits (79), Expect = 0.024
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 298 DPNEKTKDRVTV--LSHHTGHVNSVKW--IHNH-NGQTTELLSCSVDKTAVIW--TLQNG 456
D EK + V + L HT V SV W + +H +G + L SCS D T IW + +
Sbjct: 2 DLMEKNLELVEIQKLEGHTDRVWSVAWNPVSSHADGVSPILASCSGDNTVRIWEQSSLSR 61
Query: 457 CWNVTSIL-KGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
W ++L + HT V + + L TAS D T +W+
Sbjct: 62 SWTCKTVLEETHTRTVRSCAWSPSGQLLA--TASFDGTTGIWK 102
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 36.7 bits (81), Expect = 0.013
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 313 TKDRVTVLSHHTGHVNSVKWIHNHNGQTTE--LLSCSVDKTAVIWTLQNGCWNVTSILKG 486
T +R T LS H H + I + + ++ + + VD TAV++ +G + S L G
Sbjct: 205 TLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSG--QILSTLTG 262
Query: 487 HTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
H+ VT++ + D + TAS D T+ +W
Sbjct: 263 HSKKVTSV--KFVGDSDLVLTASADKTVRIW 291
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 36.7 bits (81), Expect = 0.013
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Frame = +1
Query: 313 TKDRVTVLSHHTGHVNSVKWIHNHNGQTTE--LLSCSVDKTAVIWTLQNGCWNVTSILKG 486
T +R T LS H H + I + + ++ + + VD TAV++ +G + S L G
Sbjct: 205 TLERFTQLSSHPLHKTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSG--QILSTLTG 262
Query: 487 HTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
H+ VT++ + D + TAS D T+ +W
Sbjct: 263 HSKKVTSV--KFVGDSDLVLTASADKTVRIW 291
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 36.3 bits (80), Expect = 0.018
Identities = 23/62 (37%), Positives = 35/62 (56%)
Frame = +1
Query: 397 TELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
++LLS S D+TA I L++G + +GHT V + + D I TAS+D T+ V
Sbjct: 318 SQLLSTSFDQTARIHGLKSG--KLLKEFRGHTSYVNHAI--FTSDGSRIITASSDCTVKV 373
Query: 577 WE 582
W+
Sbjct: 374 WD 375
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 35.9 bits (79), Expect = 0.024
Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 1/105 (0%)
Frame = +1
Query: 271 GACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
G AV V + K +V HH V VKW + Q LLSC D T+ ++ ++
Sbjct: 180 GLDGAVYVWNVWSNDKKKVRAFLHHNAPVKDVKW----SKQGLSLLSCGYDCTSRLFDVE 235
Query: 451 NGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY-TASTDSTIXVWE 582
G S + GV +H D ++ + + ++ +W+
Sbjct: 236 RGV-ETQSFKEDEVVGVV----KFHPDNCNVFLSGGSKGSLRLWD 275
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 35.9 bits (79), Expect = 0.024
Identities = 22/78 (28%), Positives = 38/78 (48%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH N + N N Q+ ++S S D+T IW + G +L H+ VT + +++
Sbjct: 111 GHTNYAFCV-NFNPQSNMIVSGSFDETVRIWDVTTG--KCLKVLPAHSDPVTAV--DFNR 165
Query: 529 DRLTIYTASTDSTIXVWE 582
D I ++S D +W+
Sbjct: 166 DGSLIVSSSYDGLCRIWD 183
Score = 35.5 bits (78), Expect = 0.031
Identities = 22/83 (26%), Positives = 39/83 (46%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
TGH N + + + ++S S DKT +W ++ G ++ L GHT + N++
Sbjct: 68 TGHENGISDVA-FSSDARFIVSASDDKTLKLWDVETG--SLIKTLIGHTNYAFCV--NFN 122
Query: 526 XDRLTIYTASTDSTIXVWERIXG 594
I + S D T+ +W+ G
Sbjct: 123 PQSNMIVSGSFDETVRIWDVTTG 145
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/82 (28%), Positives = 37/82 (45%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L + S DKT IW L + + +L GH V + ++ D + TAS+D+T +W
Sbjct: 232 LATASSDKTVKIWNLDG--FKLEKVLTGHERWVWDC--DFSMDGEYLVTASSDTTARLWS 287
Query: 583 RIXGTVTLKQSISLHSGLCLTL 648
G + + +C TL
Sbjct: 288 MRAGKEEMVYQAHRKATVCCTL 309
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 35.5 bits (78), Expect = 0.031
Identities = 23/83 (27%), Positives = 39/83 (46%)
Frame = +1
Query: 400 ELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+++S S D+T +W C S GH V+ + + + TI +AS D T+ VW
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 580 ERIXGTVTLKQSISLHSGLCLTL 648
L+ +++ HSG T+
Sbjct: 179 N--LQNCKLRNTLAGHSGYLNTV 199
Score = 32.3 bits (70), Expect = 0.29
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIH-NHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
+S GH V + + N ++S S DKT +W LQN C + + L GH+ G N
Sbjct: 142 ISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN-C-KLRNTLAGHS-GYLNT 198
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXG--TVTLKQSISLHSGLCLT 645
D + D I +W+ G +L+ +HS LC +
Sbjct: 199 VA-VSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS-LCFS 243
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 35.1 bits (77), Expect = 0.041
Identities = 31/108 (28%), Positives = 43/108 (39%), Gaps = 1/108 (0%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
VL H G V SV + ++ T S D+T IW + G +T L GH V +
Sbjct: 165 VLQGHLGWVRSVAFDPSNEWFCTG----SADRTIKIWDVATGVLKLT--LTGHIGQVRGL 218
Query: 511 -YGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSGLCLTLH 651
N H +++A D + W+ V LH CL LH
Sbjct: 219 AVSNRHT---YMFSAGDDKQVKCWDLEQNKVIRSYHGHLHGVYCLALH 263
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 35.1 bits (77), Expect = 0.041
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + V + + T S S+D+T IW L + N T L H GV +
Sbjct: 140 GHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LDAHQKGVNCVDYFTGG 197
Query: 529 DRLTIYTASTDSTIXVWE 582
D+ + T S D T VW+
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 35.1 bits (77), Expect = 0.041
Identities = 21/84 (25%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +1
Query: 400 ELLSCSVDKTAVIWTLQNGC-WNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXV 576
+++S S D+T +W C + ++ +GH V+ + + + + TI +AS D T+ V
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKV 178
Query: 577 WERIXGTVTLKQSISLHSGLCLTL 648
W L+ +++ H+G T+
Sbjct: 179 WN--LSNCKLRSTLAGHTGYVSTV 200
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + V + + T S S+D+T IW L + N T L H GV +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LDAHQKGVNCVDYFTGG 197
Query: 529 DRLTIYTASTDSTIXVWE 582
D+ + T S D T VW+
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + V + + T S S+D+T IW L + N T L H GV +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LDAHQKGVNCVDYFTGG 197
Query: 529 DRLTIYTASTDSTIXVWE 582
D+ + T S D T VW+
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 34.7 bits (76), Expect = 0.054
Identities = 24/78 (30%), Positives = 34/78 (43%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + V + + T S S+D+T IW L + N T L H GV +
Sbjct: 140 GHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFT--LDAHQKGVNCVDYFTGG 197
Query: 529 DRLTIYTASTDSTIXVWE 582
D+ + T S D T VW+
Sbjct: 198 DKPYLITGSDDHTAKVWD 215
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 34.3 bits (75), Expect = 0.072
Identities = 29/108 (26%), Positives = 45/108 (41%), Gaps = 3/108 (2%)
Frame = +1
Query: 271 GACNAVVVCDPNEKTKDRVT--VLSHHTGHVN-SVKWIHNHNGQTTELLSCSVDKTAVIW 441
G C D + DR T +L + GH++ S K ++ S D W
Sbjct: 196 GNCVLAGCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDAHVIGGSEDGLVFFW 255
Query: 442 TLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWER 585
L + V S + H VT++ +YH + T+S D TI VW++
Sbjct: 256 DLVDA--KVLSKFRAHDLVVTSV--SYHPKEDCMLTSSVDGTIRVWKK 299
>At4g29730.1 68417.m04233 WD-40 repeat family protein contains 5
WD-40 repeats (PF0400); similar to WD-40 repeat protein
MSI4 (SP:O22607) [Arabidopsis thaliana]
Length = 496
Score = 34.3 bits (75), Expect = 0.072
Identities = 20/81 (24%), Positives = 36/81 (44%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNY 522
+ GH ++V+ + E S D ++W + G + K H + + N
Sbjct: 277 YNGHKDTVEDVAFCPSSAQEFCSVGDDSCLMLWDARTGTSPAMKVEKAHDADLHCVDWNP 336
Query: 523 HXDRLTIYTASTDSTIXVWER 585
H + L I T S D+T+ V++R
Sbjct: 337 HDNNL-ILTGSADNTVRVFDR 356
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 34.3 bits (75), Expect = 0.072
Identities = 24/83 (28%), Positives = 38/83 (45%)
Frame = +1
Query: 400 ELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+++S S D+T +W C S GH V+ + + + TI +AS D T+ VW
Sbjct: 119 QIVSASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVW 178
Query: 580 ERIXGTVTLKQSISLHSGLCLTL 648
L+ S+ HSG T+
Sbjct: 179 N--LQNCKLRNSLVGHSGYLNTV 199
Score = 31.5 bits (68), Expect = 0.51
Identities = 30/107 (28%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIH-NHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
+S GH V + + N ++S S DKT +W LQN C + + L GH+ G N
Sbjct: 142 ISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN-C-KLRNSLVGHS-GYLNT 198
Query: 511 YGNYHXDRLTIYTASTDSTIXVWERIXG--TVTLKQSISLHSGLCLT 645
D + D I +W+ G +L+ +HS LC +
Sbjct: 199 VA-VSPDGSLCASGGKDGVILLWDLAEGKKLYSLEAGSIIHS-LCFS 243
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 33.9 bits (74), Expect = 0.095
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 1/97 (1%)
Frame = +1
Query: 295 CDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGCWNVT 471
C ++ +L HT V +++ +HNG+ L S S D+TA+IW + +G ++
Sbjct: 257 CGKHQIPSQTAQILESHTDEVWFLQF--SHNGKY--LASSSKDQTAIIWEISADGHISLK 312
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L GH V I + D + T + I W+
Sbjct: 313 HTLVGHHKPVIAIL--WSPDDRQVLTCGAEEVIRRWD 347
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 33.1 bits (72), Expect = 0.17
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 6/135 (4%)
Frame = +1
Query: 253 DGIICYGACN-AVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKT 429
+G++ G + +++V + D L+ GH + G+ L S SVDKT
Sbjct: 276 NGMLFAGTSSGSILVWKATDSESDPFKYLTSLEGHHSGEVTCFVVGGEV--LYSGSVDKT 333
Query: 430 AVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW-----ERIXG 594
+W L +T LK H VT++ D+ I ++S D TI +W E +
Sbjct: 334 IKVWDLNTLQCRMT--LKQHIGTVTSL---LCWDKCLI-SSSLDGTIKLWACSENESLKV 387
Query: 595 TVTLKQSISLHSGLC 639
T KQ +S+H+ LC
Sbjct: 388 VQTRKQELSVHT-LC 401
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXG 498
DR+ L GH++ V W N N + + S DKT +W +Q G I GH
Sbjct: 490 DRIQPLRIMAGHLSDVDWHPNCN----YIATGSSDKTVRLWDVQTG--ECVRIFIGHRSM 543
Query: 499 VTNIYGNYHXDRLTIYTASTDSTIXVWE 582
V ++ D + + D TI +W+
Sbjct: 544 VLSL--AMSPDGRYMASGDEDGTIMMWD 569
Score = 31.9 bits (69), Expect = 0.38
Identities = 19/58 (32%), Positives = 30/58 (51%)
Frame = +1
Query: 409 SCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
SCS D+TA IW++ I+ GH V ++H + I T S+D T+ +W+
Sbjct: 477 SCSHDRTARIWSMDR--IQPLRIMAGHLSDV-----DWHPNCNYIATGSSDKTVRLWD 527
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 33.1 bits (72), Expect = 0.17
Identities = 29/78 (37%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN-GCWNVTSILKGHTXGVTNIYGNYH 525
GHV+ V + Q LLS S+DKT +W L + C V S H+ VT I N
Sbjct: 511 GHVDDVLDLAWSKSQ--HLLSSSMDKTVRLWNLSSQTCLKVFS----HSDYVTCIQFNPV 564
Query: 526 XDRLTIYTASTDSTIXVW 579
DR I + S D+ + VW
Sbjct: 565 DDRYFI-SGSLDAKVRVW 581
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 33.1 bits (72), Expect = 0.17
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 1/79 (1%)
Frame = +1
Query: 349 GHVNSVKWI-HNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
GH + ++ +N NG L SC+ D T +W NG +GH+ V +
Sbjct: 35 GHERPLTFLRYNRNGDL--LFSCAKDHTPTVWFADNG--ERLGTYRGHSGAVWCC--DIS 88
Query: 526 XDRLTIYTASTDSTIXVWE 582
D + T S D T +W+
Sbjct: 89 RDSSRLITGSADQTAKLWD 107
Score = 27.5 bits (58), Expect = 8.2
Identities = 12/41 (29%), Positives = 25/41 (60%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG 456
L + GH +V W + + ++ L++ S D+TA +W +++G
Sbjct: 72 LGTYRGHSGAV-WCCDISRDSSRLITGSADQTAKLWDVKSG 111
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 32.3 bits (70), Expect = 0.29
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLT------IYTASTDS 564
L S S DKT +W ++ ++L+GH V + G + R IY+ DS
Sbjct: 318 LCSGSADKTVRLWKCSAKDYSCLAMLEGHLGPVKCLTGAFRDSRKADEASYHIYSGGLDS 377
Query: 565 TIXVWE 582
+ VW+
Sbjct: 378 QVKVWQ 383
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Frame = +1
Query: 397 TELLSCSVDKTAVIW-TLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIX 573
T L S S D+T IW T C + S H + + + + D IYT S+D I
Sbjct: 178 TLLYSVSWDRTLKIWRTTDFKC--LESFTNAHDDAINAVALSENGD---IYTGSSDQRIK 232
Query: 574 VWER 585
VW +
Sbjct: 233 VWRK 236
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 31.9 bits (69), Expect = 0.38
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL-QNGCWNVTSILKGHTXGVTNIYGN 519
HTG V + W + LLS S+DKT +W + N C V + H VT++ N
Sbjct: 327 HTGEVLDISW-----SKDNYLLSASMDKTVRLWKVGSNDCLGVFA----HNSYVTSVQFN 377
Query: 520 YHXDRLTIYTASTDSTIXVW 579
+ + S D + +W
Sbjct: 378 PVNENY-FMSGSIDGKVRIW 396
>At3g01340.1 68416.m00051 protein transport protein SEC13 family
protein / WD-40 repeat family protein similar to Protein
transport protein SEC13 SP|Q04491 {Saccharomyces
cerevisiae} and SEC13 (SP:P53024) [Pichia pastoris]
Length = 302
Score = 31.9 bits (69), Expect = 0.38
Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 4/64 (6%)
Frame = +1
Query: 400 ELLSCSVDKTAVIWTLQNGCWNVTSI--LKGHTXGVTNI--YGNYHXDRLTIYTASTDST 567
+L S D T +W NG W + L HT V ++ N + TI + S D
Sbjct: 178 KLASGGCDSTVKVWKFSNGSWKMDCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGK 237
Query: 568 IXVW 579
+ +W
Sbjct: 238 VIIW 241
Score = 31.1 bits (67), Expect = 0.67
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 483
N+ + V + H VNS+ W + G + S +V +G W+ T I +
Sbjct: 89 NQNQWTQAHVFTDHKVSVNSIAWAPHELGLSLAC-GASDGNISVFSARADGGWDTTKIDQ 147
Query: 484 GHTXGVTNI 510
H GVT++
Sbjct: 148 AHPVGVTSV 156
Score = 28.7 bits (61), Expect = 3.6
Identities = 22/90 (24%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +1
Query: 319 DRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL--QNGCWNVTSILKGHT 492
D L+ HT V V W N + + S S D +IWT+ + W T +LK
Sbjct: 201 DCFPALNKHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGEQWEGT-VLKDFK 259
Query: 493 XGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
V + + + L + + ++ + VW+
Sbjct: 260 TPVWRVSWSLTGNLLAV--SDGNNNVTVWK 287
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVT---SILKGHTXGV 501
+L+ H G+V+ +++ N + L++ S D+T ++W + G GHT V
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAH---LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADV 207
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWE 582
++ + I + S DST +W+
Sbjct: 208 LSVSISGSNPNWFI-SGSCDSTARLWD 233
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVT---SILKGHTXGV 501
+L+ H G+V+ +++ N + L++ S D+T ++W + G GHT V
Sbjct: 89 MLTGHRGYVSCCQYVPNEDAH---LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADV 145
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWE 582
++ + I + S DST +W+
Sbjct: 146 LSVSISGSNPNWFI-SGSCDSTARLWD 171
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 31.5 bits (68), Expect = 0.51
Identities = 21/87 (24%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVT---SILKGHTXGV 501
+L+ H G+V+ +++ N + L++ S D+T ++W + G GHT V
Sbjct: 151 MLTGHRGYVSCCQYVPNEDAH---LITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADV 207
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWE 582
++ + I + S DST +W+
Sbjct: 208 LSVSISGSNPNWFI-SGSCDSTARLWD 233
>At1g76260.1 68414.m08855 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to retinoblastoma A associated protein; RbAp48
(GI:3309245) [Xenopus laevis]
Length = 350
Score = 31.5 bits (68), Expect = 0.51
Identities = 22/95 (23%), Positives = 44/95 (46%), Gaps = 2/95 (2%)
Frame = +1
Query: 304 NEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILK 483
N T + V L H G +N V W +G + +L+S ++ V W+L + +L
Sbjct: 106 NSSTLECVASLDAHVGKINCVLWC--PSGNSDKLISMD-EQNLVFWSLDSS-KKSAEVLS 161
Query: 484 GHTXGVTNIY--GNYHXDRLTIYTASTDSTIXVWE 582
+ G+ + G ++ + A+++S+I W+
Sbjct: 162 KESAGMRHSLSGGAWNPHDVNSVAATSESSIQFWD 196
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 31.1 bits (67), Expect = 0.67
Identities = 14/60 (23%), Positives = 30/60 (50%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
L + D+ ++W + G T +GH V++I + ++ + + S D+T+ VW+
Sbjct: 117 LATAGADRKVLVWDVDGGF--CTHYFRGHKGVVSSILFHPDSNKNILISGSDDATVRVWD 174
Score = 27.5 bits (58), Expect = 8.2
Identities = 14/59 (23%), Positives = 27/59 (45%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+++ S DKT IW + +G + +GHT V + ++ D + D + +W
Sbjct: 556 VMTASGDKTVKIWAISDG--SCLKTFEGHTSSV--LRASFITDGTQFVSCGADGLLKLW 610
>At1g47610.1 68414.m05288 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein (GI:2739374)
[Arabidopsis thaliana]
Length = 351
Score = 31.1 bits (67), Expect = 0.67
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHT-----XGVTNIYGNYHXD----RLTIYTAS 555
L S + DK +W + S+L GHT V G D RL +Y+ S
Sbjct: 279 LFSGAADKKICVWRREGKVHTCVSVLTGHTGPVKCLAVVEPSGGEEEDGGDGRLVLYSGS 338
Query: 556 TDSTIXVW 579
D ++ VW
Sbjct: 339 LDKSVKVW 346
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 30.7 bits (66), Expect = 0.88
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +1
Query: 481 KGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE-RIXGTVTLKQSISLHSGLCLTLH 651
K HT GV I N D +I+T S D T+ VW+ R + S+SL G+ H
Sbjct: 207 KVHTMGVCCISSN-PSDPYSIFTGSYDETLRVWDTRSVSRPLNETSVSLGGGVWRIKH 263
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 30.7 bits (66), Expect = 0.88
Identities = 16/79 (20%), Positives = 33/79 (41%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
TGH + V + + ++S + D+T +W L G T + + +
Sbjct: 312 TGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNTVLFTSNCNAIC-----LS 366
Query: 526 XDRLTIYTASTDSTIXVWE 582
D LT+++ D + +W+
Sbjct: 367 IDGLTVFSGHMDGNLRLWD 385
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 30.7 bits (66), Expect = 0.88
Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-YGNYHXDRLTIYTASTDSTIXVW 579
+ S S D +W L +G S+L+GHT VT I + + ++S D T +W
Sbjct: 302 IASASNDCVIRVWRLPDGL--PVSVLRGHTGAVTAIAFSPRPGSPYQLLSSSDDGTCRIW 359
Query: 580 E 582
+
Sbjct: 360 D 360
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 30.7 bits (66), Expect = 0.88
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVT 504
L+S S+DKT IW L+ ++KGH GV+
Sbjct: 468 LVSSSLDKTLRIWDLRKSWTPQPFVVKGHNDGVS 501
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 30.7 bits (66), Expect = 0.88
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 3/82 (3%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ---NGCWNVTSILKGHTXGVTNIY 513
H G + +V W + +G+ ++L+ S DK+A IW + +G N T G + GV ++
Sbjct: 231 HKGSIYAVSW--SPDGK--QVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDML 286
Query: 514 GNYHXDRLTIYTASTDSTIXVW 579
I T S TI ++
Sbjct: 287 VGCLWQNDHIVTVSLGGTISIF 308
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + ++ +N + L SC+ D T +W NG +GH V +
Sbjct: 8 GHERPLTFLR-YNREGDLLFSCAKDHTPTLWFADNG--ERLGTYRGHNGAVWCC--DVSR 62
Query: 529 DRLTIYTASTDSTIXVWE 582
D + T S D T +W+
Sbjct: 63 DSSRLITGSADQTAKLWD 80
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L + GH N W + + ++ L++ S D+TA +W +++G T T V
Sbjct: 45 LGTYRGH-NGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAV 103
Query: 514 GNYHXDRLTIYT 549
G DRL + T
Sbjct: 104 G----DRLAVIT 111
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + ++ +N + L SC+ D T +W NG +GH V +
Sbjct: 8 GHERPLTFLR-YNREGDLLFSCAKDHTPTLWFADNG--ERLGTYRGHNGAVWCC--DVSR 62
Query: 529 DRLTIYTASTDSTIXVWE 582
D + T S D T +W+
Sbjct: 63 DSSRLITGSADQTAKLWD 80
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L + GH N W + + ++ L++ S D+TA +W +++G T T V
Sbjct: 45 LGTYRGH-NGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAV 103
Query: 514 GNYHXDRLTIYT 549
G DRL + T
Sbjct: 104 G----DRLAVIT 111
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 30.7 bits (66), Expect = 0.88
Identities = 20/78 (25%), Positives = 32/78 (41%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHX 528
GH + ++ +N + L SC+ D T +W NG +GH V +
Sbjct: 8 GHERPLTFLR-YNREGDLLFSCAKDHTPTLWFADNG--ERLGTYRGHNGAVWCC--DVSR 62
Query: 529 DRLTIYTASTDSTIXVWE 582
D + T S D T +W+
Sbjct: 63 DSSRLITGSADQTAKLWD 80
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/72 (27%), Positives = 33/72 (45%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
L + GH N W + + ++ L++ S D+TA +W +++G T T V
Sbjct: 45 LGTYRGH-NGAVWCCDVSRDSSRLITGSADQTAKLWDVKSGKELFTFKFNAPTRSVDFAV 103
Query: 514 GNYHXDRLTIYT 549
G DRL + T
Sbjct: 104 G----DRLAVIT 111
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 30.3 bits (65), Expect = 1.2
Identities = 10/39 (25%), Positives = 23/39 (58%)
Frame = +1
Query: 472 SILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERI 588
++L+GH V ++ ++H + ++T S D + +W+ I
Sbjct: 11 AVLRGHRHSVMDV--SFHPSKSLLFTGSADGELRIWDTI 47
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 475 ILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
IL GH V+ Y + D T+ TASTD+T+ +W+
Sbjct: 877 ILSGHNKAVS--YAKF-LDNETLVTASTDNTLKLWD 909
>At3g20740.1 68416.m02624 fertilization-independent endosperm
protein (FIE) contains 6 WD-40 repeats (PF00400);
identical to fertilization-independent endosperm protein
(GI:4567095) [Arabidopsis thaliana]
Length = 369
Score = 30.3 bits (65), Expect = 1.2
Identities = 32/143 (22%), Positives = 58/143 (40%), Gaps = 7/143 (4%)
Frame = +1
Query: 172 GTMKVSVXQVYTSVACNRKPEVVXW----NYDGIICYGACNAVV-VCDPNEKTKDRVTVL 336
G +S Q Y V W N + + G ++ V D N +T + V
Sbjct: 67 GDGAISALQSYADEDKEESFYTVSWACGVNGNPYVAAGGVKGIIRVIDVNSETIHKSLV- 125
Query: 337 SHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNG-CWNVTSILKGHTXGVTNIY 513
GH +SV I + +++ S D++ +W ++ G C + + GH V ++
Sbjct: 126 ----GHGDSVNEIRTQPLKPQLVITASKDESVRLWNVETGICILIFAGAGGHRYEVLSV- 180
Query: 514 GNYH-XDRLTIYTASTDSTIXVW 579
++H D + D+TI +W
Sbjct: 181 -DFHPSDIYRFASCGMDTTIKIW 202
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +1
Query: 409 SCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-YGNYHXDRLTIYTASTDSTIXVWE 582
S S D +W L +G S+L+GHT VT I + + ++S D T +W+
Sbjct: 364 SASNDFVIRVWRLPDGM--PISVLRGHTGAVTAIAFSPRQASVYQLLSSSDDGTCRIWD 420
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/103 (19%), Positives = 42/103 (40%)
Frame = +1
Query: 271 GACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ 450
G N V E + ++ + HT +NS+ W N+ T S+D +++ +
Sbjct: 374 GDANREAVVWDRETKQVKLNNMLFHTARINSLAWSPNNKMVATG----SIDTCVIVYEVD 429
Query: 451 NGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
+ + H GV + D T+ ++ D+++ +W
Sbjct: 430 KPASSRITARNAHLGGVNAV---AFIDDCTVASSGEDASVRLW 469
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNV-TSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
L + SVDKT +W +++ + V ++L GH V + + H R I + S D ++ +W
Sbjct: 208 LATSSVDKTVKVWDVRS--YRVPLAVLNGHGYAVRKVKFSPHR-RSLIASCSYDMSVCLW 264
Query: 580 E 582
+
Sbjct: 265 D 265
>At1g18050.1 68414.m02232 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein weak similarity to
spliceosome-associated-protein 114 [Echinococcus
multilocularis] GI:11602721; contains Pfam profile
PF01805: Surp module
Length = 285
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +1
Query: 316 KDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCW 462
K+ V + TGH + W NH+ TT + T +W + GC+
Sbjct: 80 KEAVIDYALRTGHNPTSLWHSNHSSSTTSFRTRVRSFTTSLWLSRRGCY 128
>At5g15550.2 68418.m01821 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 402
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-----NGCWNVTS--ILKGH 489
+L H+G ++SV +++++ +T + + S D+T ++ + V + IL+GH
Sbjct: 145 ILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGH 204
Query: 490 TXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
V ++ + + ++S D TI +W
Sbjct: 205 KASVQSVSAQKSGN--MVCSSSWDCTINLW 232
>At5g15550.1 68418.m01820 transducin family protein / WD-40 repeat
family protein similar to YTM1 - Homo sapiens,
EMBL:AF242546; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies,1 weak);
Length = 433
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/90 (22%), Positives = 45/90 (50%), Gaps = 7/90 (7%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-----NGCWNVTS--ILKGH 489
+L H+G ++SV +++++ +T + + S D+T ++ + V + IL+GH
Sbjct: 145 ILEGHSGAISSVALVNSNDAETVTVATASKDRTLRLFKFDPAESVDSTTKVRAYKILRGH 204
Query: 490 TXGVTNIYGNYHXDRLTIYTASTDSTIXVW 579
V ++ + + ++S D TI +W
Sbjct: 205 KASVQSVSAQKSGN--MVCSSSWDCTINLW 232
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 447
VLS H G V V+W NH T L S D+ ++W +
Sbjct: 300 VLSKHEGEVFQVEWDPNHE---TVLASSGEDRRLMVWDI 335
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL 447
V+S H G V V+W NH T L S D+ ++W L
Sbjct: 299 VMSSHEGEVFQVEWDPNHE---TVLASSGEDRRLMVWDL 334
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 29.9 bits (64), Expect = 1.5
Identities = 24/85 (28%), Positives = 33/85 (38%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
+GH V I Q LLS +D IW + N + + + GH V +I +
Sbjct: 279 SGHTKGVSAIRFFPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYM-GHAKAVRDIC--FS 335
Query: 526 XDRLTIYTASTDSTIXVWERIXGTV 600
D TA D I W+ G V
Sbjct: 336 NDGSKFLTAGYDKNIKYWDTETGQV 360
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 29.5 bits (63), Expect = 2.0
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQN-GCWNVTSILKGHTXGVTNIYGNYH 525
GH++ V + Q LLS S+DKT +W L + C V S H+ VT I N
Sbjct: 466 GHLDDVLDLSWSKSQ--HLLSSSMDKTVRLWDLSSKTCLKVFS----HSDYVTCIQFNPV 519
Query: 526 XDRLTIYTASTDSTIXVW 579
D I + S D+ + +W
Sbjct: 520 DDNYFI-SGSLDAKVRIW 536
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +1
Query: 478 LKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVT 603
L GH VT I D+L YTAS D T+ +W+ G T
Sbjct: 140 LDGHQKVVTGIALPSGSDKL--YTASKDETVRIWDCASGQCT 179
>At4g15396.1 68417.m02353 cytochrome P450-related similar to
Cytochrome P450 90C1 (ROTUNDIFOLIA3) (SP:Q9M066)
[Arabidopsis thaliana]; contains Pfam profile: PF00067:
Cytochrome P450 {Arabidopsis thaliana}
Length = 475
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/49 (28%), Positives = 27/49 (55%)
Frame = -1
Query: 378 VYPFYRVYVSCMVTQYCYSIFSFFIRITNNNSITGTVTNYPVVIPVYHF 232
+Y F+ V VS +V + C+SI+ + +N G++ YP++ + F
Sbjct: 4 LYEFWAVIVSLIVVKLCHSIYQWRNPKSNGELPPGSM-GYPIIGETFEF 51
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 301 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW 441
P +K D V ++ H G V + TT L+S SVD T IW
Sbjct: 306 PLDKLIDGVQIVGKHDGEVTDLSMCQ---WMTTRLVSSSVDGTIKIW 349
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 29.5 bits (63), Expect = 2.0
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +1
Query: 301 PNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW 441
P +K D V ++ H G V + TT L+S SVD T IW
Sbjct: 341 PLDKLIDGVQIVGKHDGEVTDLSMCQ---WMTTRLVSSSVDGTIKIW 384
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 202 YTSVACNRKP--EVVX--WNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVK 369
+ V+C RK +V+ ++YDG + A + V N +T + H + V+
Sbjct: 498 FNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 557
Query: 370 WIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY- 546
+ N +T+L + S DKT IW + + + +I GH V +I ++H + +
Sbjct: 558 FRPN----STQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSI--DFHPKKTELLC 610
Query: 547 TASTDSTIXVWE 582
+ +++ I W+
Sbjct: 611 SCDSNNDIRFWD 622
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 202 YTSVACNRKP--EVVX--WNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVK 369
+ V+C RK +V+ ++YDG + A + V N +T + H + V+
Sbjct: 500 FNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 370 WIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY- 546
+ N +T+L + S DKT IW + + + +I GH V +I ++H + +
Sbjct: 560 FRPN----STQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSI--DFHPKKTELLC 612
Query: 547 TASTDSTIXVWE 582
+ +++ I W+
Sbjct: 613 SCDSNNDIRFWD 624
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 202 YTSVACNRKP--EVVX--WNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVK 369
+ V+C RK +V+ ++YDG + A + V N +T + H + V+
Sbjct: 500 FNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 370 WIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY- 546
+ N +T+L + S DKT IW + + + +I GH V +I ++H + +
Sbjct: 560 FRPN----STQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSI--DFHPKKTELLC 612
Query: 547 TASTDSTIXVWE 582
+ +++ I W+
Sbjct: 613 SCDSNNDIRFWD 624
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 202 YTSVACNRKP--EVVX--WNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVK 369
+ V+C RK +V+ ++YDG + A + V N +T + H + V+
Sbjct: 500 FNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 370 WIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY- 546
+ N +T+L + S DKT IW + + + +I GH V +I ++H + +
Sbjct: 560 FRPN----STQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSI--DFHPKKTELLC 612
Query: 547 TASTDSTIXVWE 582
+ +++ I W+
Sbjct: 613 SCDSNNDIRFWD 624
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 29.5 bits (63), Expect = 2.0
Identities = 31/132 (23%), Positives = 61/132 (46%), Gaps = 5/132 (3%)
Frame = +1
Query: 202 YTSVACNRKP--EVVX--WNYDGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVK 369
+ V+C RK +V+ ++YDG + A + V N +T + H + V+
Sbjct: 500 FNEVSCIRKSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQVESTPEEHAHIITDVR 559
Query: 370 WIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIY- 546
+ N +T+L + S DKT IW + + + +I GH V +I ++H + +
Sbjct: 560 FRPN----STQLATSSFDKTIKIWDASDPGYFLRTI-SGHAAPVMSI--DFHPKKTELLC 612
Query: 547 TASTDSTIXVWE 582
+ +++ I W+
Sbjct: 613 SCDSNNDIRFWD 624
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/84 (25%), Positives = 36/84 (42%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI 510
+L H + S+ W HN N ++S T W QN NV + H + ++
Sbjct: 160 ILQAHDQPIRSMVWSHNEN----YMVSGDDGGTLKYW--QNNMNNVKANKTAHKESIRDL 213
Query: 511 YGNYHXDRLTIYTASTDSTIXVWE 582
++ L + S D+T+ VW+
Sbjct: 214 --SFCKTDLKFCSCSDDTTVKVWD 235
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 29.1 bits (62), Expect = 2.7
Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 7/66 (10%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNI-------YGNYHXDRLTIYTASTD 561
+ S S DKT +W S+L GHT V + + +Y+ S D
Sbjct: 351 VFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVKCLAVEADREASERRDKKWIVYSGSLD 410
Query: 562 STIXVW 579
++ VW
Sbjct: 411 KSVKVW 416
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = +1
Query: 463 NVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERIXGTVTLKQSISLHSG--L 636
N ILKGH V + +++ S D TI VW+R T ++ H+G
Sbjct: 329 NYGGILKGHKLAVLCL----EVAGSLVFSGSADKTICVWKRDGNIHTCLSVLTGHTGPVK 384
Query: 637 CLTLHA 654
CL + A
Sbjct: 385 CLAVEA 390
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 29.1 bits (62), Expect = 2.7
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +1
Query: 259 IICYGACN-AVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAV 435
I+ YGA + ++ VC E+ +VL TGH V + + + S S+DKT
Sbjct: 187 ILAYGASDGSLTVCSLLEEP----SVLKQLTGHSKDVTDF-DFSSNNQYIASSSLDKTIR 241
Query: 436 IWTLQNG 456
+W L G
Sbjct: 242 VWELSRG 248
>At5g58760.1 68418.m07360 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
damage-specific DNA binding protein 2 (GI:10798819)
[Homo sapiens]
Length = 557
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/76 (27%), Positives = 31/76 (40%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
LLSC D A IW ++ + H V + Y + I T D+ I +W+
Sbjct: 328 LLSCGNDHFARIWDMRKLQPKASLHDLAHKRVVNSAYFS-PSSGTKILTTCQDNRIRIWD 386
Query: 583 RIXGTVTLKQSISLHS 630
I G + L +HS
Sbjct: 387 SIFGNLDLPSREIVHS 402
>At4g13510.1 68417.m02107 ammonium transporter 1, member 1 (AMT1.1)
identical to SP|P54144 High affinity ammonium
transporter (AtAMT1;1) {Arabidopsis thaliana}
Length = 501
Score = 28.7 bits (61), Expect = 3.6
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 1/63 (1%)
Frame = +1
Query: 331 VLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWT-LQNGCWNVTSILKGHTXGVTN 507
++++ TG N TT L C+ T + L +G WNVT + G G
Sbjct: 267 LVTYETGTYNGQWSAVGRTAVTTTLAGCTAALTTLFGKRLLSGHWNVTDVCNGLLGGFAA 326
Query: 508 IYG 516
I G
Sbjct: 327 ITG 329
>At3g22770.1 68416.m02871 F-box family protein-related contains
TIGRFAM TIGR01640: F-box protein interaction domain
Length = 327
Score = 28.7 bits (61), Expect = 3.6
Identities = 21/97 (21%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +1
Query: 148 IYLKKVFCGTMKVSVXQVYTSVACNRKPEVVXWN--YDGIICYGACNAVVVCDPNEKTKD 321
+YL +V V +S R+ +V+ D I C+ +++C + K
Sbjct: 10 VYLMRVNLDNNVVESSSSSSSSCIKREAKVISLGDEVDDISQVFHCDGLLLCISITQAKT 69
Query: 322 RVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTA 432
R+ V + + GH S++ H N + + DK++
Sbjct: 70 RLVVWNPYWGHTRSIEPTHQFNKFDSYSYALGYDKSS 106
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 28.7 bits (61), Expect = 3.6
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +1
Query: 415 SVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWERI 588
S DK +W ++ ++ + L H V + D +Y+ + D +I VWER+
Sbjct: 253 SADKKIKVWNKKDKKHSLVATLTKHLSAVNALA--ISEDGKVLYSGACDRSILVWERL 308
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 28.3 bits (60), Expect = 4.7
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 4/114 (3%)
Frame = +1
Query: 253 DGIICYGACNAVVVCDPNEKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSV--DK 426
D IC NA P K+ D + H G V V W H E L SV D+
Sbjct: 200 DAQICLWDINAT----PKNKSLDAQQIFKAHEGVVEDVAWHLRH-----EYLFGSVGDDQ 250
Query: 427 TAVIWTLQNGCWN--VTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+IW L++ + V S++ H+ V + N + + T STD T+ +++
Sbjct: 251 YLLIWDLRSPSASKPVQSVV-AHSMEVNCLAFN-PFNEWVVATGSTDKTVKLFD 302
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 28.3 bits (60), Expect = 4.7
Identities = 19/62 (30%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +1
Query: 403 LLSCSVDKTAVIW-TLQNGCWNVTSILKGHTXGVTNIYGNYHXD-RLTIYTASTDSTIXV 576
LLSCS+D T IW ++ G VT K GV + G + + + + A D+T+ +
Sbjct: 327 LLSCSLDNTVKIWAAIEGGNLEVTYTHK-EEHGVLALCGVHDAEAKPVLLCACNDNTLRL 385
Query: 577 WE 582
++
Sbjct: 386 YD 387
Score = 27.9 bits (59), Expect = 6.2
Identities = 23/83 (27%), Positives = 38/83 (45%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYH 525
TGH +V ++ L S S+DKT +W+L N L H+ V ++
Sbjct: 271 TGHTLAVVTLYVG---ANRLYSGSMDKTIKVWSLDN--LQCIQTLTDHSSVVMSL---IC 322
Query: 526 XDRLTIYTASTDSTIXVWERIXG 594
D+ + + S D+T+ +W I G
Sbjct: 323 WDQF-LLSCSLDNTVKIWAAIEG 344
>At3g13290.1 68416.m01673 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1322
Score = 28.3 bits (60), Expect = 4.7
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = +1
Query: 307 EKTKDRVTVLSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIW 441
+K D V ++ H G V + TT L+S SVD T IW
Sbjct: 327 DKLIDGVQIVGKHDGEVTDLSMCQ---WMTTRLVSSSVDGTVKIW 368
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 28.3 bits (60), Expect = 4.7
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +1
Query: 403 LLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGNYHXDRLTIYTASTDSTIXVWE 582
+ S S DKT IW + +K H V I + + T+YT S D I VW
Sbjct: 208 IYSVSWDKTLKIWRASD--LRCKESIKAHDDAVNAIAVSTNG---TVYTGSADRRIRVWA 262
Query: 583 RIXG 594
+ G
Sbjct: 263 KPTG 266
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
LS H V ++W + L+S SVD + +IW + G +V IL H V +
Sbjct: 49 LSFHRKDVLDLQW----SPDDAYLISGSVDNSCIIWDVNKG--SVHQILDAHCHYVQGV- 101
Query: 514 GNYHXDRLTIYTASTDS 564
D L Y AS S
Sbjct: 102 ---AWDPLAKYVASLSS 115
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
LS H V ++W + L+S SVD + +IW + G +V IL H V +
Sbjct: 108 LSFHRKDVLDLQW----SPDDAYLISGSVDNSCIIWDVNKG--SVHQILDAHCHYVQGV- 160
Query: 514 GNYHXDRLTIYTASTDS 564
D L Y AS S
Sbjct: 161 ---AWDPLAKYVASLSS 174
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/77 (31%), Positives = 33/77 (42%)
Frame = +1
Query: 334 LSHHTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIY 513
LS H V ++W + L+S SVD + +IW + G +V IL H V +
Sbjct: 108 LSFHRKDVLDLQW----SPDDAYLISGSVDNSCIIWDVNKG--SVHQILDAHCHYVQGV- 160
Query: 514 GNYHXDRLTIYTASTDS 564
D L Y AS S
Sbjct: 161 ---AWDPLAKYVASLSS 174
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 27.9 bits (59), Expect = 6.2
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 2/82 (2%)
Frame = +1
Query: 343 HTGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL--QNGCWNVTSILKGHTXGVTNIYG 516
HTG + + W + LLS SVD+T +W + + C V S H VT +
Sbjct: 362 HTGEILDLSW-----SEKGFLLSSSVDETVRLWRVGSSDECIRVFS----HKSFVTCVAF 412
Query: 517 NYHXDRLTIYTASTDSTIXVWE 582
N D I + S D + +W+
Sbjct: 413 NPVDDNYFI-SGSIDGKVRIWD 433
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 27.9 bits (59), Expect = 6.2
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 9/91 (9%)
Frame = +1
Query: 349 GHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTL---------QNGCWNVTSILKGHTXGV 501
GH SV + +G + L+S S D + +W+L Q G HT V
Sbjct: 118 GHYRSVTCLV-FSGDDSLLVSGSQDGSIRVWSLIRLFDDFQRQQGNTLYEHNFNEHTMSV 176
Query: 502 TNIYGNYHXDRLTIYTASTDSTIXVWERIXG 594
T+I +Y I ++S D T VW G
Sbjct: 177 TDIVIDYGGCNAVIISSSEDRTCKVWSLSRG 207
>At3g44020.1 68416.m04713 thylakoid lumenal P17.1 protein contains
Pfam PF00684 : DnaJ central domain (4 repeats);
SP:Q9LXV9; PMID:11719511; supported by EST AI997589.
Length = 159
Score = 27.9 bits (59), Expect = 6.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 313 FFHSDHKQQQHYRHRNKLSR 254
FFH H+R+RNKLSR
Sbjct: 29 FFHKPELISHHHRNRNKLSR 48
>At1g54790.2 68414.m06248 GDSL-motif lipase/hydrolase family protein
similar to early nodulin ENOD8 [Medicago sativa]
GI:304037, elicitor-induced glycoprotein iEP4 [Daucus
carota] GI:1911765, lanatoside 15'-O-acetylesterase
[Digitalis lanata] GI:3688284; contains InterPro Entry
IPR001087 Lipolytic enzyme, G-D-S-L family
Length = 408
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 151 YLKKVFCGTMKVSVXQVYTSVACNRKPEVVXWNYDGIICYGACNAVV 291
Y ++ CG KV T+ ACN E + W DGI A N V
Sbjct: 338 YDSRITCGQTKVLDGISVTAKACNDSSEYINW--DGIHYTEAANEFV 382
>At1g54790.1 68414.m06247 GDSL-motif lipase/hydrolase family protein
similar to early nodulin ENOD8 [Medicago sativa]
GI:304037, elicitor-induced glycoprotein iEP4 [Daucus
carota] GI:1911765, lanatoside 15'-O-acetylesterase
[Digitalis lanata] GI:3688284; contains InterPro Entry
IPR001087 Lipolytic enzyme, G-D-S-L family
Length = 382
Score = 27.9 bits (59), Expect = 6.2
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +1
Query: 151 YLKKVFCGTMKVSVXQVYTSVACNRKPEVVXWNYDGIICYGACNAVV 291
Y ++ CG KV T+ ACN E + W DGI A N V
Sbjct: 312 YDSRITCGQTKVLDGISVTAKACNDSSEYINW--DGIHYTEAANEFV 356
>At1g10380.1 68414.m01169 expressed protein
Length = 305
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/46 (32%), Positives = 22/46 (47%)
Frame = +1
Query: 382 HNGQTTELLSCSVDKTAVIWTLQNGCWNVTSILKGHTXGVTNIYGN 519
H+ LL CSVD++ V L NG V+ + + T +Y N
Sbjct: 117 HDDTVFTLLDCSVDESPVFTPLSNGSGRVSLCDRQSSSICTFLYSN 162
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 27.5 bits (58), Expect = 8.2
Identities = 24/79 (30%), Positives = 35/79 (44%), Gaps = 1/79 (1%)
Frame = +1
Query: 346 TGHVNSVKWIHNHNGQTTELLSCSVDKTAVIWTLQ-NGCWNVTSILKGHTXGVTNIYGNY 522
TGH++ V + Q LLS S+DKT +W ++ C L H VT + N
Sbjct: 516 TGHLDDVLDLSWSRSQL--LLSSSMDKTVRLWDIETQSCLK----LFAHNDYVTCVQFN- 568
Query: 523 HXDRLTIYTASTDSTIXVW 579
D + S D+ I +W
Sbjct: 569 PLDEDYFISGSLDAKIRIW 587
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,680,551
Number of Sequences: 28952
Number of extensions: 217824
Number of successful extensions: 771
Number of sequences better than 10.0: 98
Number of HSP's better than 10.0 without gapping: 678
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 754
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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