Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I22
         (513 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY805323-1|AAV66543.1|  459|Anopheles gambiae beta subunit-GABA-...    27   0.49 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    24   2.6  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   4.6  
AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal prot...    23   4.6  

>AY805323-1|AAV66543.1|  459|Anopheles gambiae beta
           subunit-GABA-A-gated chloride channelprotein.
          Length = 459

 Score = 26.6 bits (56), Expect = 0.49
 Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
 Frame = +2

Query: 110 TGKLLLSDK-PTIIITL*GKYTSKVWRPTRFLCS 208
           TG++++ D     +ITL G +  K+W P  F  +
Sbjct: 73  TGEIMIEDDGANDVITLSGDFAEKIWVPDTFFAN 106


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 24.2 bits (50), Expect = 2.6
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 159  EESTRAKCGGQRDSFVQEGAGGILRIPSAGAEDQGHRYKGPREWLGR 299
            +E  R   GG  DS  +EG G   R     +  Q  R K   E L +
Sbjct: 958  KEKARRGSGGDSDSEEEEGEGSRKRKKKGASGGQKKRQKAMDEGLSQ 1004


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 183  HTLLVYFPHNVIIIVGLSDNN 121
            H L   FPHN   I+G+++++
Sbjct: 3094 HGLSYVFPHNTSNIIGITEDH 3114


>AF079312-1|AAC28093.1|  271|Anopheles gambiae 60S ribosomal protein
           rpL7a protein.
          Length = 271

 Score = 23.4 bits (48), Expect = 4.6
 Identities = 14/45 (31%), Positives = 21/45 (46%)
 Frame = +1

Query: 199 PLFKRVQEVFFEFPQPEQKIKGIAIKDLENGLAEPSITRGGLGFN 333
           P+ K+V       P P  K K + +K + N L E  +   G+G N
Sbjct: 6   PVKKKVVPKQKVAPAPLAKPKKVEVKKVVNPLFEKRVKNYGIGQN 50


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 489,925
Number of Sequences: 2352
Number of extensions: 9207
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 46514490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)