Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I21
         (623 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0838 - 20927020-20927207,20927288-20927491,20927654-209282...    31   0.98 
06_01_0922 - 7113781-7113942,7114093-7114235,7115305-7115506,711...    28   6.9  

>10_08_0838 - 20927020-20927207,20927288-20927491,20927654-20928297,
            20928549-20928788,20928884-20928978,20929087-20929434,
            20929824-20930042,20930422-20930487,20931191-20931362,
            20931456-20931703,20931933-20932073,20932238-20932330,
            20932421-20932471,20933571-20933693,20933793-20934035,
            20934131-20934211,20935245-20935340,20935535-20936320,
            20936443-20937012,20937322-20937427,20938102-20938206,
            20938311-20938432,20939321-20939413,20940081-20940104
          Length = 1685

 Score = 30.7 bits (66), Expect = 0.98
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = +3

Query: 285  TYLEKSLTMHKECHHLRNQMXKILXSNKD 371
            +YL+K L M+ +C  +RNQ+  +L S++D
Sbjct: 1245 SYLKKVLHMYPDCSLVRNQLGSLLLSSED 1273


>06_01_0922 -
           7113781-7113942,7114093-7114235,7115305-7115506,
           7115590-7115685,7117053-7117139,7117237-7117638
          Length = 363

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 16/40 (40%), Positives = 20/40 (50%)
 Frame = +2

Query: 395 QIITRKEXHHSDSEKEVDDPRLRRLRNIAQSPPRXAEHKP 514
           Q+    E H  D + +VD P    L   A SPPR A H+P
Sbjct: 84  QVTPGGEEHCYDYDYDVDVPVGAELVMPACSPPRTAVHRP 123


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,718,290
Number of Sequences: 37544
Number of extensions: 228196
Number of successful extensions: 520
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 509
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 520
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1513903616
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)