Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I21
         (623 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U04209-1|AAA92786.1|  439|Homo sapiens associated microfibrillar...    81   4e-15
BC050742-1|AAH50742.1|  439|Homo sapiens microfibrillar-associat...    81   4e-15
BC023557-1|AAH23557.1|  439|Homo sapiens microfibrillar-associat...    81   4e-15

>U04209-1|AAA92786.1|  439|Homo sapiens associated microfibrillar
           protein protein.
          Length = 439

 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
 Frame = +2

Query: 179 NVLPAQPTGIQSTAGAIPIRNEKGEISMQKVKVQRYISGKKPDYAQGMXXXXXXXXXXFI 358
           + L  QP  IQSTAGA+P+RNEKGEISM+KVKV+RY+SGK+PDYA             FI
Sbjct: 5   SALMKQPP-IQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFI 63

Query: 359 XQQRPERKQVLPQIITRKEXHHSDSEKEVDDPRLRRLRN-IAQS-PPRXAEHK----PEI 520
            + + +  +         E    DS     DPRLRRL+N I++    R A H+    PE+
Sbjct: 64  KKAKEQEAE--------PEEQEEDSS---SDPRLRRLQNRISEDVEERLARHRKIVEPEV 112

Query: 521 IDAXPEAESEI 553
           +    E++SE+
Sbjct: 113 VG---ESDSEV 120


>BC050742-1|AAH50742.1|  439|Homo sapiens microfibrillar-associated
           protein 1 protein.
          Length = 439

 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
 Frame = +2

Query: 179 NVLPAQPTGIQSTAGAIPIRNEKGEISMQKVKVQRYISGKKPDYAQGMXXXXXXXXXXFI 358
           + L  QP  IQSTAGA+P+RNEKGEISM+KVKV+RY+SGK+PDYA             FI
Sbjct: 5   SALMKQPP-IQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFI 63

Query: 359 XQQRPERKQVLPQIITRKEXHHSDSEKEVDDPRLRRLRN-IAQS-PPRXAEHK----PEI 520
            + + +  +         E    DS     DPRLRRL+N I++    R A H+    PE+
Sbjct: 64  KKAKEQEAE--------PEEQEEDSS---SDPRLRRLQNRISEDVEERLARHRKIVEPEV 112

Query: 521 IDAXPEAESEI 553
           +    E++SE+
Sbjct: 113 VG---ESDSEV 120


>BC023557-1|AAH23557.1|  439|Homo sapiens microfibrillar-associated
           protein 1 protein.
          Length = 439

 Score = 80.6 bits (190), Expect = 4e-15
 Identities = 55/131 (41%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
 Frame = +2

Query: 179 NVLPAQPTGIQSTAGAIPIRNEKGEISMQKVKVQRYISGKKPDYAQGMXXXXXXXXXXFI 358
           + L  QP  IQSTAGA+P+RNEKGEISM+KVKV+RY+SGK+PDYA             FI
Sbjct: 5   SALMKQPP-IQSTAGAVPVRNEKGEISMEKVKVKRYVSGKRPDYAPMESSDEEDEEFQFI 63

Query: 359 XQQRPERKQVLPQIITRKEXHHSDSEKEVDDPRLRRLRN-IAQS-PPRXAEHK----PEI 520
            + + +  +         E    DS     DPRLRRL+N I++    R A H+    PE+
Sbjct: 64  KKAKEQEAE--------PEEQEEDSS---SDPRLRRLQNRISEDVEERLARHRKIVEPEV 112

Query: 521 IDAXPEAESEI 553
           +    E++SE+
Sbjct: 113 VG---ESDSEV 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,550,030
Number of Sequences: 237096
Number of extensions: 1261483
Number of successful extensions: 6429
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6360
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6426
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6747805200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)