Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I21
         (623 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical pr...    55   4e-08
Z93377-11|CAM84803.1|  332|Caenorhabditis elegans Hypothetical p...    29   3.6  
Z81513-15|CAM84808.1|  332|Caenorhabditis elegans Hypothetical p...    29   3.6  
AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical...    28   4.7  
AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical...    28   4.7  
AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical...    28   4.7  
U55369-8|AAK52178.1|   84|Caenorhabditis elegans Hypothetical pr...    27   8.2  

>Z79755-7|CAB02103.1|  466|Caenorhabditis elegans Hypothetical
           protein F43G9.10 protein.
          Length = 466

 Score = 55.2 bits (127), Expect = 4e-08
 Identities = 23/34 (67%), Positives = 29/34 (85%)
 Frame = +2

Query: 215 TAGAIPIRNEKGEISMQKVKVQRYISGKKPDYAQ 316
           T GAIPI+NEKG+  MQKVKV RY++GK P+YA+
Sbjct: 25  TLGAIPIKNEKGQTVMQKVKVSRYVAGKAPEYAR 58


>Z93377-11|CAM84803.1|  332|Caenorhabditis elegans Hypothetical
           protein F13A7.14 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/25 (40%), Positives = 20/25 (80%)
 Frame = +3

Query: 195 NLQAFRVQREQFR*EMKKVRSRCKR 269
           +++  R +R+QF+ EM+K RS+C++
Sbjct: 151 DVEKLRRERDQFKKEMEKYRSKCEK 175


>Z81513-15|CAM84808.1|  332|Caenorhabditis elegans Hypothetical
           protein F13A7.14 protein.
          Length = 332

 Score = 28.7 bits (61), Expect = 3.6
 Identities = 10/25 (40%), Positives = 20/25 (80%)
 Frame = +3

Query: 195 NLQAFRVQREQFR*EMKKVRSRCKR 269
           +++  R +R+QF+ EM+K RS+C++
Sbjct: 151 DVEKLRRERDQFKKEMEKYRSKCEK 175


>AC084197-15|AAN63425.1|  391|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5c protein.
          Length = 391

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 QRPERKQVLPQIITRKEXHHSDSEKEVD 448
           +RPE  Q           HHSDSE+E+D
Sbjct: 120 ERPESHQSAHSAAVSNASHHSDSEEELD 147


>AC084197-14|AAM44396.1|  526|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5b protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 QRPERKQVLPQIITRKEXHHSDSEKEVD 448
           +RPE  Q           HHSDSE+E+D
Sbjct: 255 ERPESHQSAHSAAVSNASHHSDSEEELD 282


>AC084197-13|AAM44395.1|  571|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.5a protein.
          Length = 571

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = +2

Query: 365 QRPERKQVLPQIITRKEXHHSDSEKEVD 448
           +RPE  Q           HHSDSE+E+D
Sbjct: 300 ERPESHQSAHSAAVSNASHHSDSEEELD 327


>U55369-8|AAK52178.1|   84|Caenorhabditis elegans Hypothetical
           protein C18C4.6 protein.
          Length = 84

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +3

Query: 291 LEKSLTMHKECHHLRNQMXKILXSNKD 371
           LE+ LT  + C+H  NQ  K+L ++ D
Sbjct: 44  LEQELTQAQICNHRLNQQLKVLANSSD 70


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,568,050
Number of Sequences: 27780
Number of extensions: 220346
Number of successful extensions: 592
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 592
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1363963182
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)