Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_I18
(654 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol bin... 55 4e-08
Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical pr... 45 5e-05
AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical... 42 4e-04
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 29 2.2
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 29 2.2
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 29 2.2
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 28 5.0
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 28 5.0
AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical ... 28 5.0
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 28 5.0
Z73969-16|CAD44085.1| 254|Caenorhabditis elegans Hypothetical p... 28 6.7
Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical p... 28 6.7
Z73969-14|CAA98240.1| 541|Caenorhabditis elegans Hypothetical p... 28 6.7
AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB serin... 28 6.7
AF072379-1|AAC62466.1| 541|Caenorhabditis elegans Akt/PKB serin... 28 6.7
>AF000195-7|AAC24270.1| 676|Caenorhabditis elegans Oxysterol
binding protein (osbp)related protein 4, isoform a
protein.
Length = 676
Score = 55.2 bits (127), Expect = 4e-08
Identities = 33/92 (35%), Positives = 47/92 (51%)
Frame = +1
Query: 136 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICP 315
+ G L K+TN+V GWQ RWF ++ +T L YY + + GQ RG+ L AV+
Sbjct: 1 MEGPLSKWTNMVHGWQYRWFKIENDT--LLYYT---SREKMLKGQ-QRGQIRLTGAVVGI 54
Query: 316 XDEXSKTFTINCAXGDMLXLRATDARARQEWV 411
E + FTI G ++ D R R +WV
Sbjct: 55 DGENNSLFTIT-VEGKTFHMQGRDLRERNQWV 85
>Z79754-5|CAB02094.2| 573|Caenorhabditis elegans Hypothetical
protein F25H2.6 protein.
Length = 573
Score = 44.8 bits (101), Expect = 5e-05
Identities = 26/93 (27%), Positives = 45/93 (48%)
Frame = +1
Query: 133 PLSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVIC 312
P +G + K+TN V GWQ R+F + G L YYL + RG L +A+I
Sbjct: 8 PTNGVMKKWTNYVNGWQDRYFEI--TEGNLVYYL-----SKAEKSHGCRGSIFLKSAIIA 60
Query: 313 PXDEXSKTFTINCAXGDMLXLRATDARARQEWV 411
+ F+I+ + L+A +++++ W+
Sbjct: 61 AHEFDENEFSISMGENVVWYLKAENSQSKLLWM 93
>AL117202-14|CAB57894.2| 766|Caenorhabditis elegans Hypothetical
protein Y47D3A.17a protein.
Length = 766
Score = 41.9 bits (94), Expect = 4e-04
Identities = 33/125 (26%), Positives = 55/125 (44%)
Frame = +1
Query: 139 SGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICPX 318
+G L K+TN +KG++QRWF +D LSYY + + G RG +L A +
Sbjct: 64 AGWLNKWTNYLKGYRQRWFVLD-SNATLSYY-----RNPSEVGHTCRGSINLQEARV-HT 116
Query: 319 DEXSKTFTINCAXGDMLXLRATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQLAVH 498
D+ + I+ ++ + RQ+W + L + H + A Q+A
Sbjct: 117 DKTTSCIVIS-GQSQTFHVKPQNEMDRQQWTNSLEYMR--HKAITRAESEEDEDAQMAKT 173
Query: 499 DAMAS 513
D+ S
Sbjct: 174 DSNRS 178
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 377 ELPTPARARSGSTGSGPLLXYTP 445
E P PA+ R G+ G GP Y P
Sbjct: 487 ECPNPAKPREGAEGEGPKATYVP 509
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 377 ELPTPARARSGSTGSGPLLXYTP 445
E P PA+ R G+ G GP Y P
Sbjct: 487 ECPNPAKPREGAEGEGPKATYVP 509
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 29.5 bits (63), Expect = 2.2
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = +2
Query: 377 ELPTPARARSGSTGSGPLLXYTP 445
E P PA+ R G+ G GP Y P
Sbjct: 487 ECPNPAKPREGAEGEGPKATYVP 509
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 377 ELPTPARARSGSTGSGPLLXYTP 445
E P PA+ R G G GP Y P
Sbjct: 276 ECPNPAKPREGVEGEGPKATYVP 298
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 377 ELPTPARARSGSTGSGPLLXYTP 445
E P PA+ R G G GP Y P
Sbjct: 276 ECPNPAKPREGVEGEGPKATYVP 298
>AF100656-7|AAF99964.2| 615|Caenorhabditis elegans Hypothetical
protein F49F1.8 protein.
Length = 615
Score = 28.3 bits (60), Expect = 5.0
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = +1
Query: 373 LRATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQLAVHDAMASARQQLQATELSDA 552
L +A +E +R +A + T ++G +PPL+ ++A A + Q EL DA
Sbjct: 195 LALENAVLTEESAKWVRKLA-LETFLIGLSPPLKRLVRIASPKTTEEAFELAQTIELVDA 253
Query: 553 ALAR 564
AL R
Sbjct: 254 ALLR 257
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.3 bits (60), Expect = 5.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +2
Query: 377 ELPTPARARSGSTGSGPLLXYTP 445
E P PA+ R G G GP Y P
Sbjct: 276 ECPNPAKPREGVEGEGPKATYVP 298
>Z73969-16|CAD44085.1| 254|Caenorhabditis elegans Hypothetical
protein C12D8.10c protein.
Length = 254
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Frame = +1
Query: 136 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICP 315
+ G L+K ++ W+ R+F + + +L + P + +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRA--KPKEGQPFPEPLNDFMIKDAATMLF 75
Query: 316 XDEXSKTFTINCAXGDMLXLR---ATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQ 486
F + C + R A A RQ W+ AI I K G N P+E+
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWI---HAIESISKKYKGTN--ANPQEE 130
Query: 487 L 489
L
Sbjct: 131 L 131
>Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical
protein C12D8.10b protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Frame = +1
Query: 136 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICP 315
+ G L+K ++ W+ R+F + + +L + P + +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRA--KPKEGQPFPEPLNDFMIKDAATMLF 75
Query: 316 XDEXSKTFTINCAXGDMLXLR---ATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQ 486
F + C + R A A RQ W+ AI I K G N P+E+
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWI---HAIESISKKYKGTN--ANPQEE 130
Query: 487 L 489
L
Sbjct: 131 L 131
>Z73969-14|CAA98240.1| 541|Caenorhabditis elegans Hypothetical
protein C12D8.10a protein.
Length = 541
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Frame = +1
Query: 136 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICP 315
+ G L+K ++ W+ R+F + + +L + P + +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRA--KPKEGQPFPEPLNDFMIKDAATMLF 75
Query: 316 XDEXSKTFTINCAXGDMLXLR---ATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQ 486
F + C + R A A RQ W+ AI I K G N P+E+
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWI---HAIESISKKYKGTN--ANPQEE 130
Query: 487 L 489
L
Sbjct: 131 L 131
>AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 546
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Frame = +1
Query: 136 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICP 315
+ G L+K ++ W+ R+F + + +L + P + +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRA--KPKEGQPFPEPLNDFMIKDAATMLF 75
Query: 316 XDEXSKTFTINCAXGDMLXLR---ATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQ 486
F + C + R A A RQ W+ AI I K G N P+E+
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWI---HAIESISKKYKGTN--ANPQEE 130
Query: 487 L 489
L
Sbjct: 131 L 131
>AF072379-1|AAC62466.1| 541|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 541
Score = 27.9 bits (59), Expect = 6.7
Identities = 28/121 (23%), Positives = 46/121 (38%), Gaps = 3/121 (2%)
Frame = +1
Query: 136 LSGQLYKYTNVVKGWQQRWFAVDPETGVLSYYLYDGPXDTIQPGQPARGEAHLXAAVICP 315
+ G L+K ++ W+ R+F + + +L + P + +P AA +
Sbjct: 18 IEGWLHKKGEHIRNWRPRYFMIFNDGALLGFRA--KPKEGQPFPEPLNDFMIKDAATMLF 75
Query: 316 XDEXSKTFTINCAXGDMLXLR---ATDARARQEWVDGLRAIAXIHTKVMGANPPLQPREQ 486
F + C + R A A RQ W+ AI I K G N P+E+
Sbjct: 76 EKPRPNMFMVRCLQWTTVIERTFYAESAEVRQRWI---HAIESISKKYKGTN--ANPQEE 130
Query: 487 L 489
L
Sbjct: 131 L 131
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,914,758
Number of Sequences: 27780
Number of extensions: 241014
Number of successful extensions: 619
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 619
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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