Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I15
         (650 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.6  
DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc gr...    22   5.0  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.0  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   6.7  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    21   8.8  
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     21   8.8  

>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = +1

Query: 274 SRWRIRGIVIQYTRVSRGRTSCE 342
           S+WR+R  +I+Y  +  G+   E
Sbjct: 417 SKWRVRSAIIEYMPLLAGQLGRE 439



 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +1

Query: 505 LYHIIMYFSSVIY*KRHNILELVLPIF 585
           L  +IM  S ++   RHN +E +LP+F
Sbjct: 347 LASVIMGLSPIL--GRHNTIEHLLPLF 371


>DQ659254-1|ABG47452.1|  431|Tribolium castaneum imaginal disc
           growth factor 4 protein.
          Length = 431

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +2

Query: 179 P*TRSSNIYSPKSATPTNDYVRLQ 250
           P   SS  Y P++  P  D++ L+
Sbjct: 213 PNVNSSVYYDPRALAPNLDFITLE 236


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = +1

Query: 562 LELVLPIFXEXV*YQRTMAEMYG 630
           L+LVLPI+ + V   + + ++YG
Sbjct: 211 LDLVLPIYSQLVFMCKKINKLYG 233


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 308 YCMTMPRILHRLQ*VKGHTVEVEHNHLS 225
           +C+ +P + HR Q   G T +  H +++
Sbjct: 43  HCVNLPGVGHRCQCQPGFTGKYCHENIN 70


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 329 GPLVSPRGNTINR 367
           G L+SP GNT N+
Sbjct: 55  GSLLSPSGNTPNK 67


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 12/26 (46%), Positives = 14/26 (53%), Gaps = 3/26 (11%)
 Frame = +2

Query: 278 DGESAALSYSTRACPVV---GPLVSP 346
           D + AAL+YST A  V    GP   P
Sbjct: 260 DSQQAALNYSTLASAVASANGPSQDP 285


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 154,960
Number of Sequences: 336
Number of extensions: 3377
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)