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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I15
         (650 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom...    29   2.0  
At2g30940.2 68415.m03773 protein kinase family protein contains ...    29   2.7  
At2g30940.1 68415.m03772 protein kinase family protein contains ...    29   2.7  
At1g23540.1 68414.m02960 protein kinase family protein contains ...    29   2.7  
At5g37930.1 68418.m04569 seven in absentia (SINA) family protein...    28   6.2  
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)...    28   6.2  

>At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM
            domain-containing protein contains Pfam profiles PF00168:
            C2 domain; contains PF02893: GRAM domain; similar to
            Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B
            Length(GI:6980525); similar to Synaptotagmin III (SytIII)
            (Swiss-Prot:P40748) [Rattus norvegicus]
          Length = 1859

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = +1

Query: 397  VEITNYFNLHFAYKFEYSNTFILCSCISRNKT*YVKLYHIIMYFSSVIY*KR 552
            V + +YFNLH  Y+ E S         S+ KT YV++Y  I +  S  + KR
Sbjct: 1782 VPLGDYFNLHLRYQMEEST--------SKPKTTYVRVYFGIEWLKSTRHQKR 1825


>At2g30940.2 68415.m03773 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 447

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 197 LTIWSMVCVSSMRAMFLSSITYRKRCFVFSRRRC 96
           + +W ++  S+  A  L  I     CF+F RRRC
Sbjct: 52  IKLWILITASASIAFLLVLIISVLLCFIFHRRRC 85


>At2g30940.1 68415.m03772 protein kinase family protein contains
           protein kinase domain, Pfam:PF00069
          Length = 445

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -1

Query: 197 LTIWSMVCVSSMRAMFLSSITYRKRCFVFSRRRC 96
           + +W ++  S+  A  L  I     CF+F RRRC
Sbjct: 52  IKLWILITASASIAFLLVLIISVLLCFIFHRRRC 85


>At1g23540.1 68414.m02960 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain
          Length = 720

 Score = 29.1 bits (62), Expect = 2.7
 Identities = 15/56 (26%), Positives = 30/56 (53%)
 Frame = +1

Query: 58  GAKPADRTMWTRMQRLRENTKHLFLYVIDDKNIARMLDTHTIDQIVKHILAQVSDT 225
           G KP D+T     + L E  + L L  I+  +++ ++DT    + V+H + ++ +T
Sbjct: 567 GRKPVDQTQPLGEESLVEWARPLLLKAIETGDLSELIDTRLEKRYVEHEVFRMIET 622


>At5g37930.1 68418.m04569 seven in absentia (SINA) family protein
           similar to SIAH1 protein [Brassica napus var. napus]
           GI:7657876; contains Pfam profile PF03145: Seven in
           absentia protein family
          Length = 349

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
 Frame = -2

Query: 283 SIDFNKLRGTLLKSN----IIICRCR*LGRVYV*RSGLWCACPACGRCSCRLSRTGRDAS 116
           S+D NK    L + N    I++   R L  VYV  S +    P  GR SCRL++   D+ 
Sbjct: 239 SLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSL 298

Query: 115 CSLG 104
              G
Sbjct: 299 LKQG 302


>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
           E2; identical to gi:2801446
          Length = 161

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
 Frame = -1

Query: 293 PRILHRLQ*VKGHT-VEVEHNHLSVSLTWASICLTIWSMVCVSSMRAMFLSSITYRKRC 120
           P  LH      GH  ++V ++  S ++  +SICL+I SM+  SS++     +  Y K C
Sbjct: 85  PAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDNDHYLKNC 143


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,680,036
Number of Sequences: 28952
Number of extensions: 272589
Number of successful extensions: 618
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 616
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1354097952
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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