BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_I15 (650 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM dom... 29 2.0 At2g30940.2 68415.m03773 protein kinase family protein contains ... 29 2.7 At2g30940.1 68415.m03772 protein kinase family protein contains ... 29 2.7 At1g23540.1 68414.m02960 protein kinase family protein contains ... 29 2.7 At5g37930.1 68418.m04569 seven in absentia (SINA) family protein... 28 6.2 At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 28 6.2 >At1g03370.1 68414.m00316 C2 domain-containing protein / GRAM domain-containing protein contains Pfam profiles PF00168: C2 domain; contains PF02893: GRAM domain; similar to Chain A, Crystal Structure Of Synaptotagmin Iii C2aC2B Length(GI:6980525); similar to Synaptotagmin III (SytIII) (Swiss-Prot:P40748) [Rattus norvegicus] Length = 1859 Score = 29.5 bits (63), Expect = 2.0 Identities = 19/52 (36%), Positives = 27/52 (51%) Frame = +1 Query: 397 VEITNYFNLHFAYKFEYSNTFILCSCISRNKT*YVKLYHIIMYFSSVIY*KR 552 V + +YFNLH Y+ E S S+ KT YV++Y I + S + KR Sbjct: 1782 VPLGDYFNLHLRYQMEEST--------SKPKTTYVRVYFGIEWLKSTRHQKR 1825 >At2g30940.2 68415.m03773 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 447 Score = 29.1 bits (62), Expect = 2.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 197 LTIWSMVCVSSMRAMFLSSITYRKRCFVFSRRRC 96 + +W ++ S+ A L I CF+F RRRC Sbjct: 52 IKLWILITASASIAFLLVLIISVLLCFIFHRRRC 85 >At2g30940.1 68415.m03772 protein kinase family protein contains protein kinase domain, Pfam:PF00069 Length = 445 Score = 29.1 bits (62), Expect = 2.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -1 Query: 197 LTIWSMVCVSSMRAMFLSSITYRKRCFVFSRRRC 96 + +W ++ S+ A L I CF+F RRRC Sbjct: 52 IKLWILITASASIAFLLVLIISVLLCFIFHRRRC 85 >At1g23540.1 68414.m02960 protein kinase family protein contains Pfam domain, PF00069: Protein kinase domain Length = 720 Score = 29.1 bits (62), Expect = 2.7 Identities = 15/56 (26%), Positives = 30/56 (53%) Frame = +1 Query: 58 GAKPADRTMWTRMQRLRENTKHLFLYVIDDKNIARMLDTHTIDQIVKHILAQVSDT 225 G KP D+T + L E + L L I+ +++ ++DT + V+H + ++ +T Sbjct: 567 GRKPVDQTQPLGEESLVEWARPLLLKAIETGDLSELIDTRLEKRYVEHEVFRMIET 622 >At5g37930.1 68418.m04569 seven in absentia (SINA) family protein similar to SIAH1 protein [Brassica napus var. napus] GI:7657876; contains Pfam profile PF03145: Seven in absentia protein family Length = 349 Score = 27.9 bits (59), Expect = 6.2 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = -2 Query: 283 SIDFNKLRGTLLKSN----IIICRCR*LGRVYV*RSGLWCACPACGRCSCRLSRTGRDAS 116 S+D NK L + N I++ R L VYV S + P GR SCRL++ D+ Sbjct: 239 SLDLNKKTTILQEENDGHVIVVQVFRALHAVYVSVSCIAPLTPGVGRLSCRLAKITVDSL 298 Query: 115 CSLG 104 G Sbjct: 299 LKQG 302 >At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17) E2; identical to gi:2801446 Length = 161 Score = 27.9 bits (59), Expect = 6.2 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 1/59 (1%) Frame = -1 Query: 293 PRILHRLQ*VKGHT-VEVEHNHLSVSLTWASICLTIWSMVCVSSMRAMFLSSITYRKRC 120 P LH GH ++V ++ S ++ +SICL+I SM+ SS++ + Y K C Sbjct: 85 PAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKDNDHYLKNC 143 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 13,680,036 Number of Sequences: 28952 Number of extensions: 272589 Number of successful extensions: 618 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 608 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 616 length of database: 12,070,560 effective HSP length: 78 effective length of database: 9,812,304 effective search space used: 1354097952 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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