Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I09
         (425 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1510 + 30665857-30666038,30666137-30666236,30666358-306664...    29   2.1  
12_02_0828 - 23502276-23503472,23503568-23504002,23504097-235042...    28   3.6  
06_02_0019 - 10656005-10657511,10657712-10658739                       28   3.6  
11_06_0395 + 23088737-23088823,23090198-23090346,23090570-230907...    27   4.8  
03_02_0990 - 13028011-13028114,13028182-13028554,13029488-130296...    27   4.8  
01_01_1018 - 8046819-8046876,8046995-8047212,8048099-8048177,804...    27   4.8  

>06_03_1510 +
           30665857-30666038,30666137-30666236,30666358-30666438,
           30666514-30666618,30666722-30666916,30667440-30667501,
           30667870-30667885,30668007-30668068,30668933-30668951
          Length = 273

 Score = 28.7 bits (61), Expect = 2.1
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = -2

Query: 151 IHTCLAFVFLCWSYLDSFVITTPIFKWLDILTTRWQRYNN 32
           +H CLAF+F   ++L +F   + +     IL +RW R+++
Sbjct: 12  LHCCLAFLFKFLAFLQAFAAVSALLYAAWIL-SRWARHHH 50


>12_02_0828 -
           23502276-23503472,23503568-23504002,23504097-23504213,
           23505330-23505396,23505685-23505725,23506161-23506237,
           23506699-23506945
          Length = 726

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 6/45 (13%)
 Frame = +1

Query: 136 QGKCVLPHHPLNISEAS------ISKQSEPAKKKTVVPEDKFYSD 252
           Q  C +P++ L+IS+        +  Q + AK++  +P+D+FY+D
Sbjct: 164 QALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYND 208


>06_02_0019 - 10656005-10657511,10657712-10658739
          Length = 844

 Score = 27.9 bits (59), Expect = 3.6
 Identities = 13/35 (37%), Positives = 18/35 (51%)
 Frame = -1

Query: 425 FTENEYLFMKYTYVLTTNFAR*FKLIFININLNKY 321
           F+ N Y F  + Y  TT+F     LI + +N N Y
Sbjct: 540 FSNNPYRFKAFFYCNTTSFMSSIALIILLVNPNLY 574


>11_06_0395 +
           23088737-23088823,23090198-23090346,23090570-23090708,
           23090795-23090889,23090967-23091080,23091674-23091803,
           23091931-23092052,23092889-23093007,23093946-23094034,
           23094072-23094245,23094310-23094616,23094726-23095180,
           23095334-23096315,23096381-23097396,23097757-23097792,
           23098065-23098130
          Length = 1359

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = +1

Query: 172 ISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGSTVDYG 297
           ISEA + K  E  K   +V  ++FY D++    T   T  YG
Sbjct: 66  ISEAKVDKIVEAGKNVLLVIIEQFYFDQTGGIETGSITEIYG 107


>03_02_0990 -
           13028011-13028114,13028182-13028554,13029488-13029631,
           13030389-13030396,13030634-13030711,13030968-13031132,
           13031414-13031471
          Length = 309

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 198 LFTYTCFRYIKGVMWQYTLALPLCSCAGATWIALSLLHL 82
           +FT TC   I+G +W       +  C  +  I ++++HL
Sbjct: 268 IFTKTCGNGIEGRIWYLRTVNIVLGCVPSAQICITMMHL 306


>01_01_1018 -
           8046819-8046876,8046995-8047212,8048099-8048177,
           8048455-8048540,8048698-8048983,8049063-8049205,
           8049308-8049508,8049626-8049754,8050463-8050738,
           8050823-8051098,8051364-8052364,8052452-8052634,
           8052865-8052937,8053205-8053313,8053622-8053785
          Length = 1093

 Score = 27.5 bits (58), Expect = 4.8
 Identities = 10/36 (27%), Positives = 21/36 (58%)
 Frame = +1

Query: 160 HPLNISEASISKQSEPAKKKTVVPEDKFYSDESNAP 267
           H ++++E   SK+ +PA  +T    +   S+ +N+P
Sbjct: 379 HLVHVNEMEASKEQQPAANETYASAETVQSEVTNSP 414


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,218,643
Number of Sequences: 37544
Number of extensions: 150246
Number of successful extensions: 408
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 405
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 408
length of database: 14,793,348
effective HSP length: 75
effective length of database: 11,977,548
effective search space used: 790518168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)