Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I09
         (425 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73965-1|CAI42029.1|  200|Homo sapiens transcription elongation ...    29   6.6  
Z70719-3|CAI42012.1|  183|Homo sapiens transcription elongation ...    29   6.6  
BC071675-1|AAH71675.1|  200|Homo sapiens TCEAL6 protein protein.       29   6.6  
BC008703-1|AAH08703.1|  200|Homo sapiens transcription elongatio...    29   6.6  
BC007622-1|AAH07622.1|  200|Homo sapiens transcription elongatio...    29   6.6  
AK098494-1|BAC05318.1|  200|Homo sapiens protein ( Homo sapiens ...    29   6.6  

>Z73965-1|CAI42029.1|  200|Homo sapiens transcription elongation
           factor A (SII)-like 3 protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 163 PLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGST 285
           P N +E ++  + +P  +  V P+D+  SDE   P  EG T
Sbjct: 4   PYNKNEGNLENEGKPEDE--VEPDDEGKSDEEEKPDVEGKT 42


>Z70719-3|CAI42012.1|  183|Homo sapiens transcription elongation
           factor A (SII)-like 6 protein.
          Length = 183

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 163 PLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGST 285
           P N +E ++  + +P  +  V P+D+  SDE   P  EG T
Sbjct: 4   PYNKNEGNLENEGKPEDE--VEPDDEGKSDEEEKPDAEGKT 42


>BC071675-1|AAH71675.1|  200|Homo sapiens TCEAL6 protein protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 163 PLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGST 285
           P N +E ++  + +P  +  V P+D+  SDE   P  EG T
Sbjct: 4   PYNKNEGNLENEGKPEDE--VEPDDEGKSDEEEKPDAEGKT 42


>BC008703-1|AAH08703.1|  200|Homo sapiens transcription elongation
           factor A (SII)-like 3 protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 163 PLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGST 285
           P N +E ++  + +P  +  V P+D+  SDE   P  EG T
Sbjct: 4   PYNKNEGNLENEGKPEDE--VEPDDEGKSDEEEKPDVEGKT 42


>BC007622-1|AAH07622.1|  200|Homo sapiens transcription elongation
           factor A (SII)-like 3 protein.
          Length = 200

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 163 PLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGST 285
           P N +E ++  + +P  +  V P+D+  SDE   P  EG T
Sbjct: 4   PYNKNEGNLENEGKPEDE--VEPDDEGKSDEEEKPDVEGKT 42


>AK098494-1|BAC05318.1|  200|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25628 fis, clone STM03582. ).
          Length = 200

 Score = 29.1 bits (62), Expect = 6.6
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = +1

Query: 163 PLNISEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGST 285
           P N +E ++  + +P  +  V P+D+  SDE   P  EG T
Sbjct: 4   PYNKNEGNLENEGKPEDE--VEPDDEGKSDEEEKPDVEGKT 42


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,193,344
Number of Sequences: 237096
Number of extensions: 918744
Number of successful extensions: 1613
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1598
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1613
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)