Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I09
         (425 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003142-3|AAB54188.1|  739|Caenorhabditis elegans Him-three par...    32   0.20 
Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical p...    28   3.2  
Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical pr...    28   3.2  
AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical ...    28   3.2  
Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical pr...    27   7.4  
U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding p...    27   7.4  
U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding p...    27   7.4  
AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical ...    27   7.4  
Z96102-2|CAI79216.1|  746|Caenorhabditis elegans Hypothetical pr...    26   9.8  

>AF003142-3|AAB54188.1|  739|Caenorhabditis elegans Him-three
           paralog protein 3 protein.
          Length = 739

 Score = 31.9 bits (69), Expect = 0.20
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = +1

Query: 175 SEASISKQSEPAKKKTVVPEDKFYSDESNAPATEGSTVDYGLXNKXIN 318
           S+A I+   +  + K+ +PE+    D + +   E ST  YG+ N  IN
Sbjct: 450 SDAIITSPEKRNESKSAIPEEAADLDNTTSEKQESSTARYGVSNTSIN 497


>Z77666-12|CAJ43911.2|  896|Caenorhabditis elegans Hypothetical
           protein K08E7.5c protein.
          Length = 896

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 187 ISKQSEPAKKKTVVPEDKFYSDESNAPATEGS----TVDYG 297
           I +  EP+  K   P D  +SD  NAP +E S     +DYG
Sbjct: 361 IPRSIEPSNSKPY-PSDSSWSDHDNAPGSEPSYIPDVLDYG 400


>Z77666-7|CAB01228.1| 1221|Caenorhabditis elegans Hypothetical
           protein K08E7.5a protein.
          Length = 1221

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 4/41 (9%)
 Frame = +1

Query: 187 ISKQSEPAKKKTVVPEDKFYSDESNAPATEGS----TVDYG 297
           I +  EP+  K   P D  +SD  NAP +E S     +DYG
Sbjct: 686 IPRSIEPSNSKPY-PSDSSWSDHDNAPGSEPSYIPDVLDYG 725


>AC006795-4|AAK84612.2|  430|Caenorhabditis elegans Hypothetical
           protein Y50D4B.4 protein.
          Length = 430

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 157 HHPLNISEASISKQSEPAKKKTVV 228
           + PL++ E +IS+Q  P+KK T +
Sbjct: 8   YSPLSLGETNISQQKHPSKKSTAL 31


>Z93389-5|CAI79177.1|  212|Caenorhabditis elegans Hypothetical
           protein T13F3.8 protein.
          Length = 212

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 10/26 (38%), Positives = 18/26 (69%)
 Frame = +1

Query: 193 KQSEPAKKKTVVPEDKFYSDESNAPA 270
           K+ E  KK+ +VP+++ Y+D+  A A
Sbjct: 153 KEDEKPKKEEIVPQEQKYTDKEQAIA 178


>U80445-9|AAB37799.1|  264|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform a protein.
          Length = 264

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 178 EASISKQSEPAKKKTVVPEDKFYSDESNAPATEG 279
           + +++   E  +++ V+P D  Y D+  APA  G
Sbjct: 212 DIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPG 245


>U80445-8|AAK68259.1|  300|Caenorhabditis elegans Fk506-binding
           protein family protein5, isoform b protein.
          Length = 300

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 178 EASISKQSEPAKKKTVVPEDKFYSDESNAPATEG 279
           + +++   E  +++ V+P D  Y D+  APA  G
Sbjct: 248 DIAMTGMCEGERRQVVIPSDFGYGDDGRAPAIPG 281


>AF022984-1|AAB69953.1|  540|Caenorhabditis elegans Hypothetical
           protein ZK488.6 protein.
          Length = 540

 Score = 26.6 bits (56), Expect = 7.4
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 3/41 (7%)
 Frame = +1

Query: 124 GTQR-QGKCVLPHHPLNISEASIS--KQSEPAKKKTVVPED 237
           G +R Q KC++   P N++  SI   K     KKK VVPED
Sbjct: 418 GRERDQPKCII--RPENVAMMSIHGPKDMYKGKKKIVVPED 456


>Z96102-2|CAI79216.1|  746|Caenorhabditis elegans Hypothetical
           protein H39E23.3 protein.
          Length = 746

 Score = 26.2 bits (55), Expect = 9.8
 Identities = 11/32 (34%), Positives = 21/32 (65%)
 Frame = +1

Query: 175 SEASISKQSEPAKKKTVVPEDKFYSDESNAPA 270
           +E++ S++  PAK+++  P+ +    E NAPA
Sbjct: 136 TESADSEKKAPAKRESDKPKTESADSEKNAPA 167


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,438,948
Number of Sequences: 27780
Number of extensions: 147462
Number of successful extensions: 527
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 425
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 703342068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)