Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I09
         (425 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    21   7.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.6  

>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 313 INSYLFKLILMNINLNYRAKF 375
           +NS L  LI    NL+YR  F
Sbjct: 372 VNSALNPLIYTIFNLDYRRAF 392


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 313 INSYLFKLILMNINLNYRAKF 375
           +NS L  LI    NL+YR  F
Sbjct: 372 VNSALNPLIYTIFNLDYRRAF 392


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 6/15 (40%), Positives = 10/15 (66%)
 Frame = -2

Query: 124 LCWSYLDSFVITTPI 80
           LCW+  +  + +TPI
Sbjct: 211 LCWTQDEDIICSTPI 225


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 20.6 bits (41), Expect = 7.6
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 313 INSYLFKLILMNINLNYRAKF 375
           +NS L  LI    NL+YR  F
Sbjct: 372 VNSALNPLIYTIFNLDYRRAF 392


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,931
Number of Sequences: 438
Number of extensions: 1917
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)