Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I06
         (651 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   1.6  
EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    21   8.8  
AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory recept...    21   8.8  
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    21   8.8  
AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory recept...    21   8.8  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/32 (28%), Positives = 19/32 (59%)
 Frame = +3

Query: 234 LTNILNFAYKIYSIVYLYCTNLKNGKSLTLLN 329
           +TN+ N  Y  Y    + CT+ +N + ++++N
Sbjct: 353 VTNLTNLTYPSYYNQDVSCTHYQNPEYISVVN 384


>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 574 FQMHVCSPLYENIC 533
           F+M +  P Y NIC
Sbjct: 447 FEMVIAEPEYTNIC 460


>AM292377-1|CAL23189.2|  358|Tribolium castaneum gustatory receptor
           candidate 56 protein.
          Length = 358

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 577 ALHCSVTDSFHLFN 618
           ALH  +TD+ H+ N
Sbjct: 266 ALHIKLTDTAHMIN 279


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 11/31 (35%), Positives = 16/31 (51%)
 Frame = +2

Query: 275 RIFVLYQFKEREKFNAIKFFFICHLKLFVIL 367
           +IF+      R +F A +FF I    LF +L
Sbjct: 205 QIFIDVVQHNRPEFKAARFFSIDRSTLFSVL 235


>AM292342-1|CAL23154.2|  386|Tribolium castaneum gustatory receptor
           candidate 21 protein.
          Length = 386

 Score = 21.0 bits (42), Expect = 8.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +1

Query: 577 ALHCSVTDSFHLFN 618
           ALH  +TD+ H+ N
Sbjct: 266 ALHIKLTDTAHMIN 279


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,112
Number of Sequences: 336
Number of extensions: 2213
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)