Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I06
         (651 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148...    36   0.037
03_01_0527 + 3960982-3961290,3961371-3961464,3961898-3962084,396...    27   9.8  

>02_01_0003 +
           13079-13610,14005-14312,14364-14549,14620-14707,
           14807-14887,14980-15044,15357-15497,15578-15694,
           15995-16237,16326-16383,18127-18224
          Length = 638

 Score = 35.5 bits (78), Expect = 0.037
 Identities = 13/27 (48%), Positives = 20/27 (74%)
 Frame = +2

Query: 32  LQRNPANFIKYQNNPKIAAVIAKLQAK 112
           +  NPA+F ++Q NPK+  +IAK+ AK
Sbjct: 607 VMNNPASFARHQANPKVGPIIAKMMAK 633


>03_01_0527 +
           3960982-3961290,3961371-3961464,3961898-3962084,
           3962194-3962449,3962561-3962773,3962856-3962942,
           3963089-3963223,3963296-3963409,3963507-3963754,
           3963824-3963904,3963979-3964210,3964340-3964438,
           3964513-3964701,3964928-3965023
          Length = 779

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 189 RPPMMTSDLINIS*SLTNILNFAYKIYSIVYLY 287
           +PPM   DL NIS S  N+   A K   ++Y+Y
Sbjct: 309 QPPMNLPDLKNISSSSINVKVVAKKKRPLIYVY 341


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,642,455
Number of Sequences: 37544
Number of extensions: 172827
Number of successful extensions: 338
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 338
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)