Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I06
         (651 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical pr...    41   7e-04
Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical pr...    41   7e-04
Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical pr...    30   1.2  
Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical pr...    27   8.7  
Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical pr...    27   8.7  
AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral signa...    27   8.7  

>Z83241-3|CAB05818.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +2

Query: 32  LQRNPANFIKYQNNPKIAAVIAKLQAK 112
           + +NPAN +KY NNPK+A +I+KLQ+K
Sbjct: 345 IMQNPANMMKYINNPKVAKLISKLQSK 371


>Z81120-9|CAB03349.1|  422|Caenorhabditis elegans Hypothetical
           protein T12D8.8 protein.
          Length = 422

 Score = 41.1 bits (92), Expect = 7e-04
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +2

Query: 32  LQRNPANFIKYQNNPKIAAVIAKLQAK 112
           + +NPAN +KY NNPK+A +I+KLQ+K
Sbjct: 345 IMQNPANMMKYINNPKVAKLISKLQSK 371


>Z81054-8|CAB02886.3|  341|Caenorhabditis elegans Hypothetical
           protein F01D4.7 protein.
          Length = 341

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +1

Query: 430 LMYIEMLXIIYXNLNVXFYFIS*YNFLTVFFFNYCICFHKAGYIHAFET 576
           L  I M  IIY  LN        +N   +FFF +C CF ++  +   +T
Sbjct: 35  LSVISMGSIIYFFLNYSNLLAFHFNIKILFFFQFCSCFLQSATLAISQT 83


>Z74026-5|CAA98419.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 175  ARFGSTKTWKAARRSTRTSTKFRL*FSYNSSNFRIVLIFN 56
            A F  TK  K A+RST   T++     +N S+  + ++FN
Sbjct: 2115 AEFERTKQEKEAQRSTVIETQYSSKDMFNESDISLDVVFN 2154


>Z72513-4|CAA96672.3| 3517|Caenorhabditis elegans Hypothetical protein
            T04F3.1 protein.
          Length = 3517

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/40 (35%), Positives = 22/40 (55%)
 Frame = -3

Query: 175  ARFGSTKTWKAARRSTRTSTKFRL*FSYNSSNFRIVLIFN 56
            A F  TK  K A+RST   T++     +N S+  + ++FN
Sbjct: 2115 AEFERTKQEKEAQRSTVIETQYSSKDMFNESDISLDVVFN 2154


>AF099001-6|AAC68738.2|  661|Caenorhabditis elegans Lateral
           signaling target protein 2 protein.
          Length = 661

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = -1

Query: 441 NIHKFFKSSDLLTVPLFDCLSNVGSRMTNNFR*QMKKNL 325
           N+   F+SS+ L   LF C++ V  ++  N+  +++K L
Sbjct: 477 NLRSRFRSSEDLVHRLFVCIAGVADQLQTNYSSEIRKVL 515


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,179,812
Number of Sequences: 27780
Number of extensions: 189148
Number of successful extensions: 438
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 434
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 438
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)