Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_I04
(372 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.) 41 3e-04
SB_46036| Best HMM Match : PSRT (HMM E-Value=1) 31 0.23
SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.30
SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 0.69
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.2
SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1) 29 1.2
SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15) 28 2.1
SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.1
SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3) 28 2.1
SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4) 28 2.8
SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.8
SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32) 27 3.7
SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.7
SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_26402| Best HMM Match : K-box (HMM E-Value=1) 27 4.9
SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_51968| Best HMM Match : PT (HMM E-Value=0.54) 27 4.9
SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.9
SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35) 27 4.9
SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6) 27 4.9
SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18) 27 6.4
SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.4
SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91) 26 8.5
SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) 26 8.5
SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
SB_8004| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 8.5
>SB_7913| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 336
Score = 41.1 bits (92), Expect = 3e-04
Identities = 24/67 (35%), Positives = 29/67 (43%)
Frame = -3
Query: 367 HPSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 188
H R R+ SR R +R P R +R P P S R RS +PR R+ SR R
Sbjct: 219 HRRSRSRSRSRSPRRRRRSRSPRRRRRSRSPSPHHRSHRSRSRSRSPRRRHSRSRSPTHR 278
Query: 187 RSPHHFH 167
R H
Sbjct: 279 RHRSRSH 285
>SB_46036| Best HMM Match : PSRT (HMM E-Value=1)
Length = 878
Score = 31.5 bits (68), Expect = 0.23
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = -3
Query: 364 PSGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRN-KPSR 203
P GR ++ SR T R+ T+ N R P P S R S +PR R+ PSR
Sbjct: 534 PVGRTKSPSRSY---TSPRQRRTSPNNRSPPPRRRSPSPRRPSPSPRRRSTSPSR 585
>SB_39786| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 294
Score = 31.1 bits (67), Expect = 0.30
Identities = 17/60 (28%), Positives = 27/60 (45%), Gaps = 4/60 (6%)
Frame = -3
Query: 340 SRDIRTTTEARRPGTARNTRRPKPTELSACCR----ERSETPRHRNKPSRPVWSRRSPHH 173
+RD R T R P ++ R P+P++ R +R P + + RP +R P H
Sbjct: 191 NRDTRDTINNRHPRPSQQQRHPRPSQQQRHPRPSQQQRYPRPSQQQRQPRPSQQQRYPRH 250
>SB_23556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 671
Score = 29.9 bits (64), Expect = 0.69
Identities = 15/59 (25%), Positives = 31/59 (52%)
Frame = +1
Query: 142 SSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASDAECFSLCLGAGPL 318
++ +S+Y ++++ + ++++Y + P S +A SD FSLC+ GPL
Sbjct: 137 NTRLSEYLESRDCEAMDVR-LQRLYEHELVMYRLPESSATATPLSDLFDFSLCMCYGPL 194
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 29.1 bits (62), Expect = 1.2
Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 1/59 (1%)
Frame = +2
Query: 182 TPSRPNR-SRRFIPVTGRL*ALPAASAQLCRLRTPSVSRCAWAPGLCGGPDVPAHGSAP 355
TPS P+ S P T + P+ + TPS APG G P P+ SAP
Sbjct: 466 TPSTPSTPSTPSTPSTPSTPSTPSTPSTSSTPSTPSTPSTPSAPGTPGTPSTPSTPSAP 524
>SB_43189| Best HMM Match : PGAMP (HMM E-Value=2.1)
Length = 461
Score = 29.1 bits (62), Expect = 1.2
Identities = 17/57 (29%), Positives = 22/57 (38%)
Frame = -3
Query: 346 AVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSPH 176
A+ + T RP + R R P S R +T PSRP + R PH
Sbjct: 4 ALHNTLTRTRVPSRPCSLRTVRHPHTGTKSTMAYARDDTLTRTRVPSRPSRTVRHPH 60
>SB_20899| Best HMM Match : RRM_1 (HMM E-Value=2.3e-15)
Length = 876
Score = 28.3 bits (60), Expect = 2.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -2
Query: 371 GSPLRAVQSREQGHQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSP 219
G P R G D H GP RH H +RL P RD P
Sbjct: 132 GPPDRHTPPDRNGPPDRH-GPPDRHGMDHGRGRGRGRDRLSPPPHRDRGRP 181
>SB_19124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 224
Score = 28.3 bits (60), Expect = 2.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = -3
Query: 340 SRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 179
+RD R T R P ++ R P+P++ ++R P + + RP +R P
Sbjct: 151 NRDTRDTINNRHPRPSQQQRYPRPSQ-----QQRYPRPSQQQRHPRPSQQQRHP 199
>SB_9087| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 831
Score = 28.3 bits (60), Expect = 2.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +2
Query: 287 VSRCAWAPGLCGGPDVPAHGS 349
++R W+ LCGGPD+ GS
Sbjct: 108 ITRSWWSSRLCGGPDINDDGS 128
>SB_2236| Best HMM Match : PkinA_anch (HMM E-Value=3.3)
Length = 331
Score = 28.3 bits (60), Expect = 2.1
Identities = 18/50 (36%), Positives = 22/50 (44%)
Frame = -1
Query: 372 RVTPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRPV 223
R P GGA G + PPQRP T+ V + A S +RPV
Sbjct: 14 RPVPRGGA---GGANAPPQRPKVHFWFSTIDVLLVEKLGYVAKSDNKRPV 60
>SB_28630| Best HMM Match : DUF1665 (HMM E-Value=3.4)
Length = 428
Score = 27.9 bits (59), Expect = 2.8
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = -2
Query: 368 SPL-RAVQSREQGHQDHHRGPAPRHSEKHSASEADRAER 255
+PL R +SR H+DH PR S HS D ER
Sbjct: 201 TPLKRRSRSRSLRHEDHDDA-TPRRSRSHSLRHEDEEER 238
>SB_31178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 281
Score = 27.9 bits (59), Expect = 2.8
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -2
Query: 323 HHRGPAPRHSEKHSASEADRAER 255
H GP+ RHS H +E++ A+R
Sbjct: 123 HKEGPSSRHSNVHELNESELAKR 145
>SB_11738| Best HMM Match : SH3_2 (HMM E-Value=3.7e-32)
Length = 2436
Score = 27.5 bits (58), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -2
Query: 368 SPLRAVQSREQGHQDHHRGPAPRHSEKHSASEA 270
+PL +Q E+ +G A R S HSA+E+
Sbjct: 1965 TPLSVIQEEEEDEVTEPQGVASRSSRTHSAAES 1997
>SB_2776| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1792
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 368 SPLRAVQSREQGHQDHHRGPAPRHSEKH 285
+P++ + R +G + HHR HS+KH
Sbjct: 759 APMQHLGDRREGKRRHHRRHHHSHSQKH 786
>SB_31697| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 518
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 316 EARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSRRSP 179
E ++P A+ T + S+ ++ + +P + PS+P WSR +P
Sbjct: 432 EEKKPLEAKTTPNVG-SGASSAFQKNTPSPSPKTTPSKPSWSRPTP 476
>SB_26402| Best HMM Match : K-box (HMM E-Value=1)
Length = 166
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/73 (20%), Positives = 33/73 (45%)
Frame = +1
Query: 100 RLSKMTMLIQQLNCSSSISKYYNGNGVDSVETKQVEKVYSGDGASLSAPGSKRSALSASD 279
+L + ++QQ++ S + VDS++ + EK + + SK+ L+++
Sbjct: 70 KLGETEYILQQMDSSVKQTAAIKEKDVDSLQQQLAEKDRRIEELNSKLESSKKDVLNSNQ 129
Query: 280 AECFSLCLGAGPL 318
+C GP+
Sbjct: 130 EKCLEKFKANGPV 142
>SB_59620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 249
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 307 RPGTARNTRRPKPTELSACCRERSETPRHRNKPSRP 200
RP T +T ++CC P H N SRP
Sbjct: 184 RPETVCHTTLTLVNRTNSCCHTTPNLPSHLNTQSRP 219
>SB_51968| Best HMM Match : PT (HMM E-Value=0.54)
Length = 514
Score = 27.1 bits (57), Expect = 4.9
Identities = 15/53 (28%), Positives = 23/53 (43%), Gaps = 2/53 (3%)
Frame = -3
Query: 349 RAVSRDIRTTTEARRPGTARNTRR--PKPTELSACCRERSETPRHRNKPSRPV 197
R R + T+ P R P+PT+ R+R T R KP++P+
Sbjct: 257 RPTERPTKKPTKPLLPEVEPEEERATPRPTKAKPTTRKRMPTERPTKKPTKPL 309
>SB_43996| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1056
Score = 27.1 bits (57), Expect = 4.9
Identities = 12/35 (34%), Positives = 14/35 (40%)
Frame = -2
Query: 320 HRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE 216
H P+P HS+ E LP PSPE
Sbjct: 741 HSQPSPEHSQPSPEHSLPSQEHSLPSPEHSQPSPE 775
>SB_37693| Best HMM Match : PHD (HMM E-Value=8.7e-35)
Length = 2049
Score = 27.1 bits (57), Expect = 4.9
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = -3
Query: 361 SGRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETP 227
S RC+ ++ ++ ++PG+A +PK + S R+RS +P
Sbjct: 1892 SRRCKTTAKALKKAKGKQKPGSATKKTKPK-QDSSKKKRKRSPSP 1935
>SB_32907| Best HMM Match : Gly_radical (HMM E-Value=6)
Length = 390
Score = 27.1 bits (57), Expect = 4.9
Identities = 16/45 (35%), Positives = 21/45 (46%)
Frame = -3
Query: 358 GRCRAVSRDIRTTTEARRPGTARNTRRPKPTELSACCRERSETPR 224
G+ A + + T ARRP RRP PT + R + TPR
Sbjct: 11 GQNNATTTGVVPTPRARRPVPTPRARRPNPTTKA---RRPAPTPR 52
>SB_49940| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 569
Score = 26.6 bits (56), Expect = 6.4
Identities = 17/55 (30%), Positives = 24/55 (43%)
Frame = -2
Query: 332 HQDHHRGPAPRHSEKHSASEADRAERLLPGALRDAPSPE*TFSTCLVSTESTPFP 168
H HH RH KH+A A R + D+P+ + T +S +S FP
Sbjct: 167 HPSHHHVTKSRHQTKHNAKHATRVFSI------DSPNEDSQGKTANIS-DSASFP 214
>SB_27558| Best HMM Match : dsrm (HMM E-Value=9.6e-18)
Length = 765
Score = 26.6 bits (56), Expect = 6.4
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)
Frame = -3
Query: 367 HPSGRCRAVSRDIRTTTEARRPGTARNT--RRPKPTELSACCRERSETPRHRNKPSRPVW 194
H R + SR R+ +R P R + R P+ S+ CR R R R+ SR
Sbjct: 275 HRKHRSHSRSRSPRSK-RSRSPRKRRRSKSRSPRRYRDSSSCRRRRSRSRSRSPKSRLRS 333
Query: 193 SRRSPH 176
RSP+
Sbjct: 334 RSRSPY 339
>SB_28880| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 26.6 bits (56), Expect = 6.4
Identities = 11/19 (57%), Positives = 12/19 (63%)
Frame = +2
Query: 287 VSRCAWAPGLCGGPDVPAH 343
V RC GL GGP+ PAH
Sbjct: 45 VERCCRFEGLPGGPEDPAH 63
>SB_55186| Best HMM Match : TPR_2 (HMM E-Value=0.91)
Length = 571
Score = 26.2 bits (55), Expect = 8.5
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -1
Query: 366 TPPGGAEP*AGTSGPPQRPGAQAQRETLGVRSRQS*ALAAGSAQRRP 226
+P A P AG S PP PG A V + AA ++RP
Sbjct: 517 SPKTPASPKAGLSSPPGSPGGGATSAPSNVVPPRQQQPAAAKKKQRP 563
>SB_46160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1488
Score = 26.2 bits (55), Expect = 8.5
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Frame = -3
Query: 316 EARRPGTARNTRRPKPTELSACCRERSETP---RHR-NKPSRPVWSRRSPHHFHCS 161
EAR G+ R P + R SE P ++R PS P +S R+P CS
Sbjct: 913 EARWCGSERQPETPVAPAKQSQMRFNSEAPLAPQYRYESPSEPRYSPRTPPETRCS 968
>SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36)
Length = 821
Score = 26.2 bits (55), Expect = 8.5
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -3
Query: 364 PSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 188
P GR R R T E R PG N +RP + C T + R P R +
Sbjct: 313 PPGRVTNKKRPPGRVTNEKRPPGRVTNEKRPPGKVTNQKCPPSRVTNKKR-PPGRITNEK 371
Query: 187 RSP 179
R P
Sbjct: 372 RPP 374
Score = 26.2 bits (55), Expect = 8.5
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Frame = -3
Query: 364 PSGRCRAVSRDI-RTTTEARRPGTARNTRRPKPTELSACCRERSETPRHRNKPSRPVWSR 188
P GR R R T + R PG N +RP P ++ R + P R +
Sbjct: 363 PPGRITNEKRPPGRVTNQKRPPGRVTNKKRP-PGRITNQKRPPGRVTNQKRPPGRVTNKK 421
Query: 187 RSP 179
R P
Sbjct: 422 RPP 424
>SB_40971| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 828
Score = 26.2 bits (55), Expect = 8.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 336 GTSGPPQRPGAQAQRETLGVRSRQ 265
G GPP RPG Q+ T G R ++
Sbjct: 129 GPRGPPGRPGHPGQKGTRGRRGQR 152
>SB_44956| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 736
Score = 26.2 bits (55), Expect = 8.5
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
Frame = +2
Query: 215 IPVTGRL*ALPAASAQ--LCRLRTPSVSRCAWAP 310
IP +GR L +A+ LCR +P ++R AW P
Sbjct: 534 IPTSGRCSDLDTNTAKHVLCRGLSPILTRVAWRP 567
>SB_8004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 989
Score = 26.2 bits (55), Expect = 8.5
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = -3
Query: 370 GHPSGRCRAVSRDIRTTTEARRPGTARN 287
G+P+GR R+V+R IR T+ G N
Sbjct: 602 GYPAGRPRSVARAIRKKTQQTGVGIVGN 629
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,785,215
Number of Sequences: 59808
Number of extensions: 259789
Number of successful extensions: 920
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 903
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 607387585
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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