BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_I03 (647 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 362 e-100 U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 362 e-100 U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 306 9e-84 U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 246 3e-78 Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 214 5e-56 Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 214 5e-56 Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 200 5e-52 U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 138 2e-33 U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 93 2e-19 D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 93 2e-19 D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 93 2e-19 AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 93 2e-19 AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 93 2e-19 L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 60 2e-09 Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 56 2e-08 AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 56 2e-08 Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 44 8e-06 M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 45 4e-05 Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 45 5e-05 Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 44 9e-05 Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 39 0.004 Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 39 0.004 AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 39 0.004 Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical pr... 38 0.008 AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical ... 38 0.008 U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 34 0.076 M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 34 0.076 L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.076 AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.13 DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic tr... 32 0.30 Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical p... 29 2.1 Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical p... 29 2.1 Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical pr... 29 3.8 AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical ... 29 3.8 Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 28 6.6 >U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor protein 4, isoforma protein. Length = 463 Score = 362 bits (890), Expect = e-100 Identities = 173/194 (89%), Positives = 178/194 (91%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 424 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120 Query: 425 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 604 GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180 Query: 605 IG*XQXXVXFVPIS 646 IG V FVPIS Sbjct: 181 IGYNPKAVPFVPIS 194 >U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor protein 3 protein. Length = 463 Score = 362 bits (890), Expect = e-100 Identities = 173/194 (89%), Positives = 178/194 (91%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 424 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120 Query: 425 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 604 GEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE RF EI EVS +IKK Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEARFTEITNEVSGFIKK 180 Query: 605 IG*XQXXVXFVPIS 646 IG V FVPIS Sbjct: 181 IGYNPKAVPFVPIS 194 >U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor protein 4, isoformc protein. Length = 267 Score = 306 bits (751), Expect = 9e-84 Identities = 148/172 (86%), Positives = 155/172 (90%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 424 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA GT Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVACGT 120 Query: 425 GEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKK 580 GEFEAGISKNGQTREHALLA TLGVKQL V+ T P S R + I++ Sbjct: 121 GEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSRRSDTIQR 169 >U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor protein 4, isoformd protein. Length = 429 Score = 246 bits (602), Expect(2) = 3e-78 Identities = 113/117 (96%), Positives = 116/117 (99%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 415 DKLKAERERGITIDIALWKFET+KYY+TIIDAPGHRDFIKNMITGTSQADCAVL+VA Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYITIIDAPGHRDFIKNMITGTSQADCAVLVVA 117 Score = 64.1 bits (149), Expect(2) = 3e-78 Identities = 31/47 (65%), Positives = 34/47 (72%) Frame = +2 Query: 506 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG*XQXXVXFVPIS 646 L+V NKMDSTEPP+SE RF EI EVS +IKKIG V FVPIS Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPIS 160 >Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical protein K07A12.4b protein. Length = 592 Score = 214 bits (522), Expect = 5e-56 Identities = 103/191 (53%), Positives = 136/191 (71%) Frame = +2 Query: 74 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 253 +K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ Sbjct: 167 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 226 Query: 254 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 433 + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF Sbjct: 227 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 286 Query: 434 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG* 613 E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ + Sbjct: 287 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 344 Query: 614 XQXXVXFVPIS 646 FVP+S Sbjct: 345 FSKP-KFVPVS 354 >Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical protein K07A12.4a protein. Length = 610 Score = 214 bits (522), Expect = 5e-56 Identities = 103/191 (53%), Positives = 136/191 (71%) Frame = +2 Query: 74 EKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKL 253 +K IN++V+GHVD+GKST GHL++ +D RTI+KF+ EA GK SF YAWVLD+ Sbjct: 185 DKDLINLIVVGHVDAGKSTLMGHLLHDLEVVDSRTIDKFKHEAARNGKASFAYAWVLDET 244 Query: 254 KAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 433 + ERERG+T+DI FETS + ++DAPGH+DFI NMITGTSQAD A+L+V A TGEF Sbjct: 245 EEERERGVTMDIGRTSFETSHRRIVLLDAPGHKDFISNMITGTSQADAAILVVNATTGEF 304 Query: 434 EAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG* 613 E G GQT+EHALL +LGV QLIV VNK+D+ + +S+ RF+EIK +S ++ + Sbjct: 305 ETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQDRFDEIKNNLSVFLTRQAG 362 Query: 614 XQXXVXFVPIS 646 FVP+S Sbjct: 363 FSKP-KFVPVS 372 >Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical protein H19N07.1 protein. Length = 532 Score = 200 bits (489), Expect = 5e-52 Identities = 91/194 (46%), Positives = 135/194 (69%), Gaps = 1/194 (0%) Frame = +2 Query: 68 GKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247 G K HIN+V +GHVD+GKST G L++ G +DKRT+EK+E+EA+E G+ S+ +W +D Sbjct: 104 GTHKEHINMVFVGHVDAGKSTIGGQLMFLTGMVDKRTLEKYEREAKEKGRESWYLSWCMD 163 Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 427 ERE+G T+++ FET K + TI+DAPGH+ F+ NMI G +QAD AVL+++A G Sbjct: 164 TNDEEREKGKTVEVGRAYFETEKRHFTILDAPGHKSFVPNMIVGANQADLAVLVISARRG 223 Query: 428 EFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKI 607 EFE G + GQTREH++L T GVK L++ VNKMD + E RF+EI+ +++ +++K+ Sbjct: 224 EFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEERFKEIEGKLTPFLRKL 283 Query: 608 G-*XQXXVXFVPIS 646 G + + +VP S Sbjct: 284 GFNPKTDITYVPCS 297 >U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor protein 4, isoformb protein. Length = 77 Score = 138 bits (335), Expect = 2e-33 Identities = 63/67 (94%), Positives = 64/67 (95%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 244 MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60 Query: 245 DKLKAER 265 DKLK + Sbjct: 61 DKLKVTK 67 >U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 2 protein. Length = 439 Score = 93.1 bits (221), Expect = 2e-19 Identities = 65/178 (36%), Positives = 92/178 (51%), Gaps = 2/178 (1%) Frame = +2 Query: 14 SLSRDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEK 187 S ITR+ + K ++N+ IGH+D GK+T T + + G K K Sbjct: 22 SFCNSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--K 79 Query: 188 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 367 F++ +DK K E++RGITI++A +E+ + D PGH DFIKN Sbjct: 80 FDE---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKN 124 Query: 368 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 541 MI GTSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E Sbjct: 125 MICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175 >D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 495 Score = 93.1 bits (221), Expect = 2e-19 Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 2/182 (1%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 ++K H+N+ IGHVD GK+T T + K+E +D Sbjct: 45 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 89 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 430 E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Sbjct: 90 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 149 Query: 431 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 604 QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + Sbjct: 150 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 199 Query: 605 IG 610 G Sbjct: 200 FG 201 >D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor Tu homologueprecursor protein. Length = 496 Score = 93.1 bits (221), Expect = 2e-19 Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 2/182 (1%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 ++K H+N+ IGHVD GK+T T + K+E +D Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 430 E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150 Query: 431 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 604 QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200 Query: 605 IG 610 G Sbjct: 201 FG 202 >AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation factor (ef-tu), mitochondrialprotein 1 protein. Length = 496 Score = 93.1 bits (221), Expect = 2e-19 Identities = 64/182 (35%), Positives = 95/182 (52%), Gaps = 2/182 (1%) Frame = +2 Query: 71 KEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDK 250 ++K H+N+ IGHVD GK+T T + K+E +D Sbjct: 46 RDKPHLNVGTIGHVDHGKTTLTSAITKILATSKGAKYRKYED---------------IDN 90 Query: 251 LKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGE 430 E+ RGITI+ ++ET+K + ID PGH D+IKNMITG +Q + A+L+VAA G Sbjct: 91 APEEKARGITINAFHLEYETAKRHYAHIDCPGHADYIKNMITGAAQMEGAILVVAATDGP 150 Query: 431 FEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKK 604 QTREH LLA +GV ++V +NK+D E P +E R E ++ ++ + + Sbjct: 151 MP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAETR-ELVEMDIREQLNE 200 Query: 605 IG 610 G Sbjct: 201 FG 202 >AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial elongation factorTu homologue protein. Length = 439 Score = 93.1 bits (221), Expect = 2e-19 Identities = 65/178 (36%), Positives = 92/178 (51%), Gaps = 2/178 (1%) Frame = +2 Query: 14 SLSRDITRSL*SXD*PKMGKEKTHINIVVIGHVDSGKSTTTGHL--IYKCGGIDKRTIEK 187 S ITR+ + K ++N+ IGH+D GK+T T + + G K K Sbjct: 22 SFCNSITRNAVAFFATAAATPKINVNVGTIGHIDHGKTTLTSAITRVQAKKGFAKHI--K 79 Query: 188 FEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKN 367 F++ +DK K E++RGITI++A +E+ + D PGH DFIKN Sbjct: 80 FDE---------------IDKGKEEKKRGITINVAHIGYESPLRRYSHTDCPGHSDFIKN 124 Query: 368 MITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTE 541 MI GTSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E Sbjct: 125 MICGTSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE 175 >L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical protein ZK1236.1 protein. Length = 645 Score = 59.7 bits (138), Expect = 2e-09 Identities = 47/148 (31%), Positives = 67/148 (45%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 N ++ HVD GKST L+ CG + +K+ +LDKL+ ERE Sbjct: 44 NFGIVAHVDHGKSTLADRLLEMCGAVPPG-----QKQ-------------MLDKLQVERE 85 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 448 RGIT+ Y + +ID PGH DF + + D +L+VAA G Sbjct: 86 RGITVKAQTAALRHRGYLLNLIDTPGHVDFSAEVSRSLAVCDGILLLVAANQG------- 138 Query: 449 KNGQTREHALLAFTLGVKQLIVGVNKMD 532 QT + LAF + Q+I +NK+D Sbjct: 139 VQAQTIANFWLAFEKNI-QIIPVINKID 165 >Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical protein F29C12.4 protein. Length = 750 Score = 56.0 bits (129), Expect = 2e-08 Identities = 47/148 (31%), Positives = 65/148 (43%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 NI + H+DSGK+T T ++Y G ID E+ +G +D + ER+ Sbjct: 46 NIGISAHIDSGKTTVTERILYYAGRIDSM---------HEV-RGKDDVGATMDFMDLERQ 95 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGIS 448 RGITI A + + IID PGH DF + D AVL++ G G G+ Sbjct: 96 RGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVL-CGVG----GVQ 150 Query: 449 KNGQTREHALLAFTLGVKQLIVGVNKMD 532 T L + + I VNKMD Sbjct: 151 SQTFTVNRQLARYNV---PFICFVNKMD 175 >AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical protein Y119D3B.14 protein. Length = 689 Score = 56.0 bits (129), Expect = 2e-08 Identities = 39/113 (34%), Positives = 53/113 (46%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 NI VI HVD+GK+T T L+Y G I A + KG+ V D L ERE Sbjct: 27 NIGVIAHVDAGKTTVTERLLYLAGAIHV---------AGHVDKGNT----VTDFLDIERE 73 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 427 RGIT+ A + + + +ID PGH DF + D V+++ G Sbjct: 74 RGITVQSAAVNLDWKGHRINLIDTPGHVDFRVEVERCVRVLDGIVVVIDGSAG 126 >Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical protein F46B6.6a protein. Length = 702 Score = 44.0 bits (99), Expect(2) = 8e-06 Identities = 38/108 (35%), Positives = 48/108 (44%), Gaps = 1/108 (0%) Frame = +2 Query: 212 GKGSFKYAWVLDKLKAERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQ 388 GK + A ++ A GIT I + E +K VT +D PGH F G Sbjct: 168 GKTTLLDAMRNSQIAAGEFGGITQHIGAFSVELTKGRRVTFLDTPGHAAFASMRARGAKG 227 Query: 389 ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMD 532 AD VL+VAA G E QT + A V QL+V VNK+D Sbjct: 228 ADIVVLVVAADDGVKE-------QTAQSIKFAKDANV-QLVVAVNKID 267 Score = 23.0 bits (47), Expect(2) = 8e-06 Identities = 7/13 (53%), Positives = 11/13 (84%) Frame = +2 Query: 92 IVVIGHVDSGKST 130 + ++GHVD GK+T Sbjct: 159 VTIMGHVDHGKTT 171 >M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor protein. Length = 852 Score = 45.2 bits (102), Expect = 4e-05 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 217 M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE + Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72 Query: 218 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 385 + + L+K E +G T+++ K + + + + +ID+PGH DF + Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALG 132 Query: 386 QADCAVLIVAAGTG 427 D A+++V +G Sbjct: 133 VTDGALVVVDCVSG 146 >Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical protein F25H5.4 protein. Length = 852 Score = 44.8 bits (101), Expect = 5e-05 Identities = 38/134 (28%), Positives = 64/134 (47%), Gaps = 13/134 (9%) Frame = +2 Query: 65 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGI--DKRTIEKF---EKEAQE----MGK 217 M +++ N+ VI HVD GKST T L+ K G I K +F K+ QE + Sbjct: 13 MDRKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGSKAGETRFTDTRKDEQERCITIKS 72 Query: 218 GSFKYAWVLDKLKAERERG----ITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS 385 + + L+K E +G T+++ K + + + + +ID+PGH DF + Sbjct: 73 TAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLINLIDSPGHVDFSSEVTAALR 132 Query: 386 QADCAVLIVAAGTG 427 D A+++V +G Sbjct: 133 VTDGALVVVDCVSG 146 >Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical protein C47B2.7b protein. Length = 500 Score = 44.0 bits (99), Expect = 9e-05 Identities = 47/176 (26%), Positives = 77/176 (43%), Gaps = 1/176 (0%) Frame = +2 Query: 86 INIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAER 265 +N+ ++GHVDSGK+T T + E+G S A Sbjct: 14 LNLGILGHVDSGKTTLT-------------------RRIAELGSTSAFDAHATSTTTDGI 54 Query: 266 ERGITIDIALWKFET-SKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAG 442 R T+D+ + S + +ID PGH I+ ++ ++ D A++I+ + AG Sbjct: 55 RRN-TLDLGFSTMTSLSGRRLALIDCPGHSGLIRAVLAASTVFDMAIVII-----DVVAG 108 Query: 443 ISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIG 610 I QT EH LLA ++I+ +NK D E + + E K+V +K +G Sbjct: 109 IQP--QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMG 158 >Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical protein K10C3.5b protein. Length = 705 Score = 38.7 bits (86), Expect = 0.004 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%) Frame = +2 Query: 71 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247 K HI N+ ++ HVD GK++ L+ I R G +Y +D Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59 Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 412 + E+ RGIT+ + + +ID+PGH DF + + +D A+L++ Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114 >Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical protein K10C3.5a protein. Length = 894 Score = 38.7 bits (86), Expect = 0.004 Identities = 30/115 (26%), Positives = 51/115 (44%), Gaps = 1/115 (0%) Frame = +2 Query: 71 KEKTHI-NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLD 247 K HI N+ ++ HVD GK++ L+ I R G +Y +D Sbjct: 15 KPAEHIRNVCLVAHVDHGKTSFADSLVSANAVISSRMA------------GKLRY---MD 59 Query: 248 KLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIV 412 + E+ RGIT+ + + +ID+PGH DF + + +D A+L++ Sbjct: 60 SREDEQTRGITMKSSGISLLCEPLLINLIDSPGHVDFSGEVTSALILSDIALLLI 114 >AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis gtp-binding proteinprotein 1 protein. Length = 613 Score = 38.7 bits (86), Expect = 0.004 Identities = 51/189 (26%), Positives = 76/189 (40%), Gaps = 11/189 (5%) Frame = +2 Query: 59 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 229 P K+ + V+G+VD+GKST G L + G RT K E G+ S Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191 Query: 230 YAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTS-- 385 +L + + +D + +K VT ID GH ++K I G + Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEKYLKTTIFGMTGH 250 Query: 386 QADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRF 565 D +L++ A G G T+EH LA +L V +V V K+D E Sbjct: 251 MPDYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETM 302 Query: 566 EEIKKEVSS 592 + I + V S Sbjct: 303 KNITRLVRS 311 >Z78200-2|CAB01578.1| 588|Caenorhabditis elegans Hypothetical protein T04H1.2 protein. Length = 588 Score = 37.5 bits (83), Expect = 0.008 Identities = 53/183 (28%), Positives = 79/183 (43%), Gaps = 8/183 (4%) Frame = +2 Query: 86 INIVVIGHVDSGKSTTTGHLIYKC--GGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKA 259 + + V+G D GKST G L C G K I F + E+ G K + V + + Sbjct: 169 VRLAVVGGCDVGKSTLCGVLTQGCLDDGNGKARIGIF-RFPHEVRTG--KTSSVCNDVIG 225 Query: 260 ERERGITIDIALWKF----ETSKYYVTIIDAPGHRDFIKNMITGTS--QADCAVLIVAAG 421 RG ++ A E S VT+ID G + K I G + A L+VAA Sbjct: 226 FDNRGKLVNYAQNSLEEMVEKSSKLVTLIDLAGDAKYQKTTIHGLTGYTPHFACLVVAA- 284 Query: 422 TGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIK 601 + GI+ TREH L L + ++ + KMD + ++I K+VS+ + Sbjct: 285 ----DRGIT--WATREHLGLIAALNIPMFVL-ITKMDLVD----RQGLKKIIKDVSNLVA 333 Query: 602 KIG 610 K G Sbjct: 334 KAG 336 >AC025716-9|AAK39619.1| 469|Caenorhabditis elegans Hypothetical protein Y39G10AR.8 protein. Length = 469 Score = 37.5 bits (83), Expect = 0.008 Identities = 22/85 (25%), Positives = 38/85 (44%) Frame = +2 Query: 320 YVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV 499 +V+ +D PGH + M+ G + D A L+VA QT EH + + Sbjct: 128 HVSFVDCPGHDILMATMLNGAAVMDAAFLLVAGNEP------CPQPQTSEHLAAVEIMQL 181 Query: 500 KQLIVGVNKMDSTEPPYSEPRFEEI 574 L++ NK+D + + +E+I Sbjct: 182 NHLMILQNKVDIIKESQARENYEQI 206 >U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor protein 1 protein. Length = 974 Score = 34.3 bits (75), Expect = 0.076 Identities = 28/113 (24%), Positives = 47/113 (41%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 N+ + GH+ GK+T L+ ++T +F + E F ++K + Sbjct: 134 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 184 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 427 + + I + Y + IID PGH +F M AD V++V A G Sbjct: 185 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 237 >M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. Length = 849 Score = 34.3 bits (75), Expect = 0.076 Identities = 28/113 (24%), Positives = 47/113 (41%) Frame = +2 Query: 89 NIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 N+ + GH+ GK+T L+ ++T +F + E F ++K + Sbjct: 9 NVAIAGHLHHGKTTFLDCLM-------EQTHPEFYRA--EDADARFTDILFIEKQRGCSI 59 Query: 269 RGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTG 427 + + I + Y + IID PGH +F M AD V++V A G Sbjct: 60 KSQPVSIVAQDSRSKSYLLNIIDTPGHVNFSDEMTASYRLADGVVVMVDAHEG 112 >L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding protein protein. Length = 593 Score = 34.3 bits (75), Expect = 0.076 Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 12/190 (6%) Frame = +2 Query: 59 PKMGKEKTHINIVVIGHVDSGKSTTTGHLIYKC---GGIDKRTIEKFEKEAQEMGKGSFK 229 P K+ + V+G+VD+GKST G L + G RT K E G+ S Sbjct: 132 PPTEKDFIEARVAVVGNVDAGKSTLLGVLTHSALDDGRGAARTKLFRHKHEFESGRTSSV 191 Query: 230 YAWVL------DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQ- 388 +L + + +D + +K VT ID GH ++K I G + Sbjct: 192 GNDILGFDVHGNIVNKPDPHNHNLDWVQIGSDCAK-LVTFIDLAGHEIYLKTTIFGMHRP 250 Query: 389 --ADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 562 + +L++ A G G T+EH LA +L V +V V K+D E Sbjct: 251 YARNYTMLMIGANMGII-------GTTKEHLSLALSLHVPVYLV-VTKIDMCPAYILEET 302 Query: 563 FEEIKKEVSS 592 + I + V S Sbjct: 303 MKNITRLVRS 312 >AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical protein Y54G2A.28 protein. Length = 366 Score = 33.5 bits (73), Expect = 0.13 Identities = 18/43 (41%), Positives = 24/43 (55%) Frame = -3 Query: 525 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 397 LF PT+SC+ + AS S P + PA N VP AT+S + Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54 >DQ867020-1|ABI49097.1| 1074|Caenorhabditis elegans eukaryotic translation initiationfactor eIF5B protein. Length = 1074 Score = 32.3 bits (70), Expect = 0.30 Identities = 25/78 (32%), Positives = 35/78 (44%) Frame = +2 Query: 329 IIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQL 508 IID PGH F G+S D A+L+V + G+ QT E +L G Sbjct: 553 IIDTPGHESFSNLRTRGSSLCDFAILVV-----DIMHGLEP--QTIE-SLKLLIKGKTPF 604 Query: 509 IVGVNKMDSTEPPYSEPR 562 ++ +NK+D S PR Sbjct: 605 VIALNKIDRLYEYESNPR 622 >Z66513-12|CAI46602.1| 492|Caenorhabditis elegans Hypothetical protein F54D5.5b protein. Length = 492 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 +KR ++ EKE + F Y LDK+K ER+ Sbjct: 272 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 305 >Z66513-11|CAA91332.3| 427|Caenorhabditis elegans Hypothetical protein F54D5.5a protein. Length = 427 Score = 29.5 bits (63), Expect = 2.1 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +2 Query: 167 DKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERE 268 +KR ++ EKE + F Y LDK+K ER+ Sbjct: 207 EKRKLKDMEKECNDAKNAMFHYMNQLDKVKKERD 240 >Z99709-6|CAB16863.1| 459|Caenorhabditis elegans Hypothetical protein C47B2.7a protein. Length = 459 Score = 28.7 bits (61), Expect = 3.8 Identities = 10/17 (58%), Positives = 15/17 (88%) Frame = +2 Query: 86 INIVVIGHVDSGKSTTT 136 +N+ ++GHVDSGK+T T Sbjct: 14 LNLGILGHVDSGKTTLT 30 >AF040643-5|AAT81201.1| 299|Caenorhabditis elegans Hypothetical protein F14D2.15 protein. Length = 299 Score = 28.7 bits (61), Expect = 3.8 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%) Frame = -2 Query: 508 ELFDTEGESEQGMLTGLTVLRDTSFEF-----TGTGSYDEHSAISLRGSCDH--VLDEIS 350 E + +E E G+ L V RD F + +GTGS + H ++R DH + + Sbjct: 24 EHYTSEEEDHFGIKWWLRVTRDDQFLYVDLGKSGTGSTNFHGNFNVRVESDHGVISENFK 83 Query: 349 VSRSINDGNIVLASFELPESNIDCDTTLTLSL*FVQYPSI 230 S S +D E+P ++ C++ +L + +Y SI Sbjct: 84 FSGSKSDA-------EIPSTSNRCESFKWSNLDYSKYLSI 116 >Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical protein D1081.4 protein. Length = 381 Score = 27.9 bits (59), Expect = 6.6 Identities = 17/34 (50%), Positives = 22/34 (64%), Gaps = 2/34 (5%) Frame = +2 Query: 323 VTIIDAPGHRDFI--KNMITGTSQADCAVLIVAA 418 V IID+ G RDFI KN+ GT AD +++ AA Sbjct: 73 VQIIDSSGSRDFIGMKNLYIGT--ADAFLVVFAA 104 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,104,122 Number of Sequences: 27780 Number of extensions: 282992 Number of successful extensions: 876 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 812 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 859 length of database: 12,740,198 effective HSP length: 79 effective length of database: 10,545,578 effective search space used: 1434198608 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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