Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I02
         (546 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    23   2.3  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   3.0  
AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory recept...    21   9.3  

>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 22.6 bits (46), Expect = 2.3
 Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 5/58 (8%)
 Frame = -1

Query: 165 IINQSVDIKICNYLFL-----LLI*NHGVN*NSNSMFETNFYQT*QRAFVFVYFVSMY 7
           II   +DI+I  Y+       LLI  + +N N       ++    Q  FVF YF+ ++
Sbjct: 97  IIITILDIEILGYVNKAKFGKLLINLYTINYNFKESERNDYVSLLQLVFVFCYFIYLF 154


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 22.2 bits (45), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 159 NQSVDIKICNYLFLLL 112
           N  ++I +CN +FLLL
Sbjct: 663 NFDIEIALCNGIFLLL 678


>AM292323-1|CAL23135.2|  587|Tribolium castaneum gustatory receptor
           candidate 2 protein.
          Length = 587

 Score = 20.6 bits (41), Expect = 9.3
 Identities = 5/10 (50%), Positives = 9/10 (90%)
 Frame = -3

Query: 49  VTKSICICLF 20
           +T+ +C+CLF
Sbjct: 328 ITRIVCLCLF 337


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,236
Number of Sequences: 336
Number of extensions: 1855
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13411456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)