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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I02
         (546 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||...    69   3e-13
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||...    69   5e-13
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr...    68   1e-12
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr...    67   1e-12
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||...    66   2e-12
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||...    66   3e-12
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||...    60   3e-10
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|...    58   8e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch...    48   1e-06
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p...    46   3e-06
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom...    46   5e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p...    45   6e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po...    45   6e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb...    44   1e-05
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch...    41   1e-04
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch...    41   1e-04
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p...    38   0.001
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar...    33   0.027
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma...    27   1.4  
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ...    25   9.6  

>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 203

 Score = 69.3 bits (162), Expect = 3e-13
 Identities = 33/90 (36%), Positives = 50/90 (55%)
 Frame = +3

Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
           FK++L+G   VGK+ L LRF +  +     Y +T+G  F  +    + K   + IWDTAG
Sbjct: 9   FKLLLIGDSGVGKSCLLLRFADDTYTES--YISTIGVDFKIRTFELEGKTVKLQIWDTAG 66

Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
            E +  +T  YY GAH  II Y+ +  +S+
Sbjct: 67  QERFRTITSSYYRGAHGIIIVYDVTDQDSF 96


>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 214

 Score = 68.9 bits (161), Expect = 5e-13
 Identities = 35/90 (38%), Positives = 49/90 (54%)
 Frame = +3

Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
           FK VL+G   VGK++L +RF    FN E   ++T+G  F  + +    K     IWDTAG
Sbjct: 11  FKTVLIGDSGVGKSNLLMRFTRNEFNIES--KSTIGVEFATRNIVLDNKKIKAQIWDTAG 68

Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
            E Y  +T  YY GA  A+I Y+ +   S+
Sbjct: 69  QERYRAITSAYYRGAVGALIVYDITKQSSF 98


>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 201

 Score = 67.7 bits (158), Expect = 1e-12
 Identities = 34/90 (37%), Positives = 52/90 (57%)
 Frame = +3

Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
           FK+V LG + VGKTSL  RF+  +F+    YQ T+G  F +K M  + +   + +WDTAG
Sbjct: 12  FKLVFLGEQSVGKTSLITRFMYDQFDNT--YQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69

Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
            E +  +   Y   +  AII Y+ ++H S+
Sbjct: 70  QERFRSLIPSYIRDSSVAIIVYDITNHNSF 99


>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 208

 Score = 67.3 bits (157), Expect = 1e-12
 Identities = 34/93 (36%), Positives = 54/93 (58%)
 Frame = +3

Query: 258 RCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWD 437
           R   K+V+LG   VGKT L  +FVN +F+ E  Y+ T+GA F  K +    K  ++ +WD
Sbjct: 6   RVFLKVVILGDSGVGKTCLMNQFVNQKFSRE--YKATIGADFLTKDVVVDDKLVTLQLWD 63

Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
           TAG E ++ +   +Y GA   +I Y  ++ +S+
Sbjct: 64  TAGQERFQSLGMAFYRGADCCVIVYNVNNSKSF 96


>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 205

 Score = 66.5 bits (155), Expect = 2e-12
 Identities = 30/92 (32%), Positives = 56/92 (60%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           K+++LG   VGKTS+  ++VN +F+ +  Y+ T+GA F  K +    K  ++ +WDTAG 
Sbjct: 10  KVIILGESGVGKTSIMNQYVNRKFSKD--YKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
           E ++ +   +Y GA   ++ Y+ ++ +S+  L
Sbjct: 68  ERFQSLGVAFYRGADCCVLVYDVNNSKSFETL 99


>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 211

 Score = 66.1 bits (154), Expect = 3e-12
 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMR-SKXKDYSIGIWDTAG 446
           K+VLLG   VGK+SL LRFV  +F+     ++T+GAAF  + +   +     + IWDTAG
Sbjct: 16  KLVLLGDSAVGKSSLVLRFVKDQFDDY--RESTIGAAFLTQTLPIDENTSVKLEIWDTAG 73

Query: 447 SEXYEXMTRIYYXGAHAAIICYE 515
            E Y+ +  +YY  A+ AI+ Y+
Sbjct: 74  QERYKSLAPMYYRNANCAIVVYD 96


>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 234

 Score = 59.7 bits (138), Expect = 3e-10
 Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAK----AMRSKXKDYSIGIWD 437
           KIVL G    GK+ L  RFV  +++ ++ +  TVG  F ++     M ++ K   + IWD
Sbjct: 11  KIVLAGPSGTGKSCLLQRFVKNQWDDQVSH--TVGIDFASRIISVGMGNQQKRIKLQIWD 68

Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
           TAG E +  + R YY GA  A++ Y+ ++ +S+  L
Sbjct: 69  TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL 104


>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 200

 Score = 58.0 bits (134), Expect = 8e-10
 Identities = 31/99 (31%), Positives = 49/99 (49%)
 Frame = +3

Query: 240 LKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDY 419
           + TK      K++L+G   VGK+ L LRF    F     +  T+G  F  + +    K  
Sbjct: 1   MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPS--FITTIGIDFKIRTIELDGKRI 58

Query: 420 SIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
            + IWDTAG E +  +T  YY GA   ++ Y+ +  +S+
Sbjct: 59  KLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSF 97


>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 185

 Score = 47.6 bits (108), Expect = 1e-06
 Identities = 27/89 (30%), Positives = 48/89 (53%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           +I +LGS  VGK+SL +++V   F     Y  T+   F +K ++ K ++++  I DTAG 
Sbjct: 8   RIAVLGSRSVGKSSLTVQYVENHFVES--YYPTIENTF-SKNIKYKGQEFATEIIDTAGQ 64

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
           + Y  +   +  G H  ++ Y  +S  S+
Sbjct: 65  DEYSILNSKHSIGIHGYVLVYSITSKSSF 93


>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 200

 Score = 46.4 bits (105), Expect = 3e-06
 Identities = 27/88 (30%), Positives = 44/88 (50%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           K+V++G    GKT L + F    F  E+ Y  TV   + A  +    +   + +WDTAG 
Sbjct: 8   KLVIVGDGACGKTCLLIVFSKGTF-PEV-YVPTVFENYVAD-VEVDGRHIELALWDTAGQ 64

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
           E Y+ +  + Y  +H  +IC+   + ES
Sbjct: 65  EDYDRLRPLSYPDSHVVLICFSVDAPES 92


>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 202

 Score = 45.6 bits (103), Expect = 5e-06
 Identities = 27/88 (30%), Positives = 44/88 (50%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           K+V++G    GKT L + F    F  E+ Y  TV   + A  +    +   + +WDTAG 
Sbjct: 8   KLVIVGDGACGKTCLLIVFSKGTF-PEV-YVPTVFENYVAD-VEVDGRHVELALWDTAGQ 64

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
           E Y+ +  + Y  +H  +IC+   S +S
Sbjct: 65  EDYDRLRPLSYPDSHVILICFAVDSPDS 92


>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 192

 Score = 45.2 bits (102), Expect = 6e-06
 Identities = 25/89 (28%), Positives = 46/89 (51%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           K V++G   VGKT L + +   +F ++  Y  TV   +    M    + Y++G++DTAG 
Sbjct: 5   KCVVVGDGAVGKTCLLISYTTNKFPSD--YVPTVFDNYAVTVMIGD-EPYTLGLFDTAGQ 61

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
           E Y+ +  + Y      ++C+  +S  S+
Sbjct: 62  EDYDRLRPLSYPQTDVFLVCFSVTSPASF 90


>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 205

 Score = 45.2 bits (102), Expect = 6e-06
 Identities = 27/88 (30%), Positives = 39/88 (44%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           KIV+LG    GKTSL   F    F     Y+ T+   +             + +WDTAG 
Sbjct: 15  KIVILGDGAAGKTSLLNVFTKGYFPQV--YEPTIFENYIHDIFVD-GNSIELSLWDTAGQ 71

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
           E Y+ +  + Y   H  +IC+   S +S
Sbjct: 72  EEYDQLRSLSYSDTHVIMICFAVDSRDS 99


>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 200

 Score = 44.4 bits (100), Expect = 1e-05
 Identities = 29/88 (32%), Positives = 42/88 (47%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           K+V++G    GKTSL   F    F  E  Y  TV   + +   R   K   + +WDTAG 
Sbjct: 10  KLVVVGDGACGKTSLLSVFTLGYFPTE--YVPTVFENYVSDC-RVDGKSVQLALWDTAGQ 66

Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
           E YE +  + Y  AH  ++ +   S +S
Sbjct: 67  EEYERLRPMSYAKAHIILVGFAIDSPDS 94


>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 216

 Score = 41.1 bits (92), Expect = 1e-04
 Identities = 25/86 (29%), Positives = 37/86 (43%)
 Frame = +3

Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
           FK+VL+G    GKT+   R +   F  E  Y  T+G         +   +    +WDTAG
Sbjct: 10  FKLVLVGDGGTGKTTFVKRHLTGEF--EKKYIATLGVEVHPLHFHTNFGEICFNVWDTAG 67

Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSS 524
            E    +   YY      II ++ +S
Sbjct: 68  QEKLGGLRDGYYIQGQCGIIMFDVTS 93


>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 198

 Score = 40.7 bits (91), Expect = 1e-04
 Identities = 22/84 (26%), Positives = 39/84 (46%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
           K+ ++G   +GKTSL + +V   F+ E     T+G  F  K +  +  + +  IWD  G 
Sbjct: 12  KVGMIGDSSIGKTSLMVTYVQGSFDEE--STQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69

Query: 450 EXYEXMTRIYYXGAHAAIICYEPS 521
             +  M  +    A A +  ++ S
Sbjct: 70  REFVNMLPMVCNDAVAILFMFDLS 93


>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 203

 Score = 37.9 bits (84), Expect = 0.001
 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = +3

Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRS-KXKDYSIGIWDTAG 446
           K+V++G    GKT L + F +  F     Y  TV   +          K   + +WDTAG
Sbjct: 16  KLVVVGDGGCGKTCLLIVFSSGTFPER--YVPTVFENYITDITYGPNSKVIELALWDTAG 73

Query: 447 SEXYEXMTRIYYXGAHAAIICY 512
            E Y+ +  + Y  ++  ++C+
Sbjct: 74  QEEYDRLRPLSYPNSNVILLCF 95


>SPAC22F3.05c |alp41||ADP-ribosylation factor
           Alp41|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 186

 Score = 33.1 bits (72), Expect = 0.027
 Identities = 20/90 (22%), Positives = 40/90 (44%)
 Frame = +3

Query: 234 IVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXK 413
           I+ + K+   + +++LLG ++ GKT++    + C  N ++   N V   F  +    + +
Sbjct: 6   ILRQQKLKEREVRVLLLGLDNAGKTTI----LKCLLNEDV---NEVSPTFGFQIRTLEVE 58

Query: 414 DYSIGIWDTAGSEXYEXMTRIYYXGAHAAI 503
                IWD  G +      + Y+    A I
Sbjct: 59  GLRFTIWDIGGQKTLRNFWKNYFESTEAII 88


>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
           3|||Manual
          Length = 630

 Score = 27.5 bits (58), Expect = 1.4
 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
 Frame = +3

Query: 210 SLFYINRRIVLKTKMSRCDFKIVL---LGSEHVGKTSLXLRFVNCRFNAEIPYQNTV 371
           +L  + +R+    K+S+ D  + L   +GS+  GKT+L   F+N   N   P  NTV
Sbjct: 400 ALKVMRKRVSQNRKVSKYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTP--NTV 454


>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 3655

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -1

Query: 216  IDYVK*NTMWKLXD*ILIINQSVDIKICNYL 124
            I Y+     W L   + II +S   +ICNYL
Sbjct: 2178 ISYLGDQRRWFLSALVQIIEKSSSYEICNYL 2208


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,798,838
Number of Sequences: 5004
Number of extensions: 29777
Number of successful extensions: 95
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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