BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fe100P03_F_I02 (546 letters) Database: spombe 5004 sequences; 2,362,478 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 69 3e-13 SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 69 5e-13 SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 68 1e-12 SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 67 1e-12 SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 66 2e-12 SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 66 3e-12 SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 60 3e-10 SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 58 8e-10 SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 48 1e-06 SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 46 3e-06 SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 46 5e-06 SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 45 6e-06 SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 45 6e-06 SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 44 1e-05 SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 41 1e-04 SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 41 1e-04 SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 38 0.001 SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 33 0.027 SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.4 SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.6 >SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2|||Manual Length = 203 Score = 69.3 bits (162), Expect = 3e-13 Identities = 33/90 (36%), Positives = 50/90 (55%) Frame = +3 Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446 FK++L+G VGK+ L LRF + + Y +T+G F + + K + IWDTAG Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTES--YISTIGVDFKIRTFELEGKTVKLQIWDTAG 66 Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536 E + +T YY GAH II Y+ + +S+ Sbjct: 67 QERFRTITSSYYRGAHGIIIVYDVTDQDSF 96 >SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1|||Manual Length = 214 Score = 68.9 bits (161), Expect = 5e-13 Identities = 35/90 (38%), Positives = 49/90 (54%) Frame = +3 Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446 FK VL+G VGK++L +RF FN E ++T+G F + + K IWDTAG Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIES--KSTIGVEFATRNIVLDNKKIKAQIWDTAG 68 Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536 E Y +T YY GA A+I Y+ + S+ Sbjct: 69 QERYRAITSAYYRGAVGALIVYDITKQSSF 98 >SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr 1|||Manual Length = 201 Score = 67.7 bits (158), Expect = 1e-12 Identities = 34/90 (37%), Positives = 52/90 (57%) Frame = +3 Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446 FK+V LG + VGKTSL RF+ +F+ YQ T+G F +K M + + + +WDTAG Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNT--YQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69 Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536 E + + Y + AII Y+ ++H S+ Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSF 99 >SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr 1|||Manual Length = 208 Score = 67.3 bits (157), Expect = 1e-12 Identities = 34/93 (36%), Positives = 54/93 (58%) Frame = +3 Query: 258 RCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWD 437 R K+V+LG VGKT L +FVN +F+ E Y+ T+GA F K + K ++ +WD Sbjct: 6 RVFLKVVILGDSGVGKTCLMNQFVNQKFSRE--YKATIGADFLTKDVVVDDKLVTLQLWD 63 Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536 TAG E ++ + +Y GA +I Y ++ +S+ Sbjct: 64 TAGQERFQSLGMAFYRGADCCVIVYNVNNSKSF 96 >SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2|||Manual Length = 205 Score = 66.5 bits (155), Expect = 2e-12 Identities = 30/92 (32%), Positives = 56/92 (60%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 K+++LG VGKTS+ ++VN +F+ + Y+ T+GA F K + K ++ +WDTAG Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKD--YKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545 E ++ + +Y GA ++ Y+ ++ +S+ L Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETL 99 >SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||Manual Length = 211 Score = 66.1 bits (154), Expect = 3e-12 Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMR-SKXKDYSIGIWDTAG 446 K+VLLG VGK+SL LRFV +F+ ++T+GAAF + + + + IWDTAG Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDY--RESTIGAAFLTQTLPIDENTSVKLEIWDTAG 73 Query: 447 SEXYEXMTRIYYXGAHAAIICYE 515 E Y+ + +YY A+ AI+ Y+ Sbjct: 74 QERYKSLAPMYYRNANCAIVVYD 96 >SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1|||Manual Length = 234 Score = 59.7 bits (138), Expect = 3e-10 Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAK----AMRSKXKDYSIGIWD 437 KIVL G GK+ L RFV +++ ++ + TVG F ++ M ++ K + IWD Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSH--TVGIDFASRIISVGMGNQQKRIKLQIWD 68 Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545 TAG E + + R YY GA A++ Y+ ++ +S+ L Sbjct: 69 TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL 104 >SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 58.0 bits (134), Expect = 8e-10 Identities = 31/99 (31%), Positives = 49/99 (49%) Frame = +3 Query: 240 LKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDY 419 + TK K++L+G VGK+ L LRF F + T+G F + + K Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPS--FITTIGIDFKIRTIELDGKRI 58 Query: 420 SIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536 + IWDTAG E + +T YY GA ++ Y+ + +S+ Sbjct: 59 KLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSF 97 >SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr 2|||Manual Length = 185 Score = 47.6 bits (108), Expect = 1e-06 Identities = 27/89 (30%), Positives = 48/89 (53%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 +I +LGS VGK+SL +++V F Y T+ F +K ++ K ++++ I DTAG Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVES--YYPTIENTF-SKNIKYKGQEFATEIIDTAGQ 64 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536 + Y + + G H ++ Y +S S+ Sbjct: 65 DEYSILNSKHSIGIHGYVLVYSITSKSSF 93 >SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 46.4 bits (105), Expect = 3e-06 Identities = 27/88 (30%), Positives = 44/88 (50%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 K+V++G GKT L + F F E+ Y TV + A + + + +WDTAG Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTF-PEV-YVPTVFENYVAD-VEVDGRHIELALWDTAGQ 64 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533 E Y+ + + Y +H +IC+ + ES Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPES 92 >SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pombe|chr 1|||Manual Length = 202 Score = 45.6 bits (103), Expect = 5e-06 Identities = 27/88 (30%), Positives = 44/88 (50%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 K+V++G GKT L + F F E+ Y TV + A + + + +WDTAG Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTF-PEV-YVPTVFENYVAD-VEVDGRHVELALWDTAGQ 64 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533 E Y+ + + Y +H +IC+ S +S Sbjct: 65 EDYDRLRPLSYPDSHVILICFAVDSPDS 92 >SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces pombe|chr 1|||Manual Length = 192 Score = 45.2 bits (102), Expect = 6e-06 Identities = 25/89 (28%), Positives = 46/89 (51%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 K V++G VGKT L + + +F ++ Y TV + M + Y++G++DTAG Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSD--YVPTVFDNYAVTVMIGD-EPYTLGLFDTAGQ 61 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536 E Y+ + + Y ++C+ +S S+ Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVTSPASF 90 >SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces pombe|chr 1|||Manual Length = 205 Score = 45.2 bits (102), Expect = 6e-06 Identities = 27/88 (30%), Positives = 39/88 (44%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 KIV+LG GKTSL F F Y+ T+ + + +WDTAG Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQV--YEPTIFENYIHDIFVD-GNSIELSLWDTAGQ 71 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533 E Y+ + + Y H +IC+ S +S Sbjct: 72 EEYDQLRSLSYSDTHVIMICFAVDSRDS 99 >SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pombe|chr 1|||Manual Length = 200 Score = 44.4 bits (100), Expect = 1e-05 Identities = 29/88 (32%), Positives = 42/88 (47%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 K+V++G GKTSL F F E Y TV + + R K + +WDTAG Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTE--YVPTVFENYVSDC-RVDGKSVQLALWDTAGQ 66 Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533 E YE + + Y AH ++ + S +S Sbjct: 67 EEYERLRPMSYAKAHIILVGFAIDSPDS 94 >SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr 2|||Manual Length = 216 Score = 41.1 bits (92), Expect = 1e-04 Identities = 25/86 (29%), Positives = 37/86 (43%) Frame = +3 Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446 FK+VL+G GKT+ R + F E Y T+G + + +WDTAG Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEF--EKKYIATLGVEVHPLHFHTNFGEICFNVWDTAG 67 Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSS 524 E + YY II ++ +S Sbjct: 68 QEKLGGLRDGYYIQGQCGIIMFDVTS 93 >SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr 1|||Manual Length = 198 Score = 40.7 bits (91), Expect = 1e-04 Identities = 22/84 (26%), Positives = 39/84 (46%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449 K+ ++G +GKTSL + +V F+ E T+G F K + + + + IWD G Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEE--STQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69 Query: 450 EXYEXMTRIYYXGAHAAIICYEPS 521 + M + A A + ++ S Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLS 93 >SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces pombe|chr 1|||Manual Length = 203 Score = 37.9 bits (84), Expect = 0.001 Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%) Frame = +3 Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRS-KXKDYSIGIWDTAG 446 K+V++G GKT L + F + F Y TV + K + +WDTAG Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPER--YVPTVFENYITDITYGPNSKVIELALWDTAG 73 Query: 447 SEXYEXMTRIYYXGAHAAIICY 512 E Y+ + + Y ++ ++C+ Sbjct: 74 QEEYDRLRPLSYPNSNVILLCF 95 >SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosaccharomyces pombe|chr 1|||Manual Length = 186 Score = 33.1 bits (72), Expect = 0.027 Identities = 20/90 (22%), Positives = 40/90 (44%) Frame = +3 Query: 234 IVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXK 413 I+ + K+ + +++LLG ++ GKT++ + C N ++ N V F + + + Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTI----LKCLLNEDV---NEVSPTFGFQIRTLEVE 58 Query: 414 DYSIGIWDTAGSEXYEXMTRIYYXGAHAAI 503 IWD G + + Y+ A I Sbjct: 59 GLRFTIWDIGGQKTLRNFWKNYFESTEAII 88 >SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Manual Length = 630 Score = 27.5 bits (58), Expect = 1.4 Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%) Frame = +3 Query: 210 SLFYINRRIVLKTKMSRCDFKIVL---LGSEHVGKTSLXLRFVNCRFNAEIPYQNTV 371 +L + +R+ K+S+ D + L +GS+ GKT+L F+N N P NTV Sbjct: 400 ALKVMRKRVSQNRKVSKYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTP--NTV 454 >SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces pombe|chr 1|||Manual Length = 3655 Score = 24.6 bits (51), Expect = 9.6 Identities = 12/31 (38%), Positives = 16/31 (51%) Frame = -1 Query: 216 IDYVK*NTMWKLXD*ILIINQSVDIKICNYL 124 I Y+ W L + II +S +ICNYL Sbjct: 2178 ISYLGDQRRWFLSALVQIIEKSSSYEICNYL 2208 Database: spombe Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 2,362,478 Number of sequences in database: 5004 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 1,798,838 Number of Sequences: 5004 Number of extensions: 29777 Number of successful extensions: 95 Number of sequences better than 10.0: 20 Number of HSP's better than 10.0 without gapping: 78 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 83 length of database: 2,362,478 effective HSP length: 69 effective length of database: 2,017,202 effective search space used: 225926624 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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