Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_I02
(546 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 69 3e-13
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 69 5e-13
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 68 1e-12
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 67 1e-12
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 66 2e-12
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 66 3e-12
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 60 3e-10
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 58 8e-10
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 48 1e-06
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 46 3e-06
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 46 5e-06
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 45 6e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 45 6e-06
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 44 1e-05
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 41 1e-04
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 41 1e-04
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 38 0.001
SPAC22F3.05c |alp41||ADP-ribosylation factor Alp41|Schizosacchar... 33 0.027
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 1.4
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 25 9.6
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 69.3 bits (162), Expect = 3e-13
Identities = 33/90 (36%), Positives = 50/90 (55%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK++L+G VGK+ L LRF + + Y +T+G F + + K + IWDTAG
Sbjct: 9 FKLLLIGDSGVGKSCLLLRFADDTYTES--YISTIGVDFKIRTFELEGKTVKLQIWDTAG 66
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E + +T YY GAH II Y+ + +S+
Sbjct: 67 QERFRTITSSYYRGAHGIIIVYDVTDQDSF 96
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 68.9 bits (161), Expect = 5e-13
Identities = 35/90 (38%), Positives = 49/90 (54%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK VL+G VGK++L +RF FN E ++T+G F + + K IWDTAG
Sbjct: 11 FKTVLIGDSGVGKSNLLMRFTRNEFNIES--KSTIGVEFATRNIVLDNKKIKAQIWDTAG 68
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E Y +T YY GA A+I Y+ + S+
Sbjct: 69 QERYRAITSAYYRGAVGALIVYDITKQSSF 98
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 67.7 bits (158), Expect = 1e-12
Identities = 34/90 (37%), Positives = 52/90 (57%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK+V LG + VGKTSL RF+ +F+ YQ T+G F +K M + + + +WDTAG
Sbjct: 12 FKLVFLGEQSVGKTSLITRFMYDQFDNT--YQATIGIDFLSKTMYLEDRTVRLQLWDTAG 69
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E + + Y + AII Y+ ++H S+
Sbjct: 70 QERFRSLIPSYIRDSSVAIIVYDITNHNSF 99
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 67.3 bits (157), Expect = 1e-12
Identities = 34/93 (36%), Positives = 54/93 (58%)
Frame = +3
Query: 258 RCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWD 437
R K+V+LG VGKT L +FVN +F+ E Y+ T+GA F K + K ++ +WD
Sbjct: 6 RVFLKVVILGDSGVGKTCLMNQFVNQKFSRE--YKATIGADFLTKDVVVDDKLVTLQLWD 63
Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
TAG E ++ + +Y GA +I Y ++ +S+
Sbjct: 64 TAGQERFQSLGMAFYRGADCCVIVYNVNNSKSF 96
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 66.5 bits (155), Expect = 2e-12
Identities = 30/92 (32%), Positives = 56/92 (60%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+++LG VGKTS+ ++VN +F+ + Y+ T+GA F K + K ++ +WDTAG
Sbjct: 10 KVIILGESGVGKTSIMNQYVNRKFSKD--YKATIGADFLTKEVLVDDKVVTLQLWDTAGQ 67
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E ++ + +Y GA ++ Y+ ++ +S+ L
Sbjct: 68 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETL 99
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 66.1 bits (154), Expect = 3e-12
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMR-SKXKDYSIGIWDTAG 446
K+VLLG VGK+SL LRFV +F+ ++T+GAAF + + + + IWDTAG
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDY--RESTIGAAFLTQTLPIDENTSVKLEIWDTAG 73
Query: 447 SEXYEXMTRIYYXGAHAAIICYE 515
E Y+ + +YY A+ AI+ Y+
Sbjct: 74 QERYKSLAPMYYRNANCAIVVYD 96
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 59.7 bits (138), Expect = 3e-10
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 4/96 (4%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAK----AMRSKXKDYSIGIWD 437
KIVL G GK+ L RFV +++ ++ + TVG F ++ M ++ K + IWD
Sbjct: 11 KIVLAGPSGTGKSCLLQRFVKNQWDDQVSH--TVGIDFASRIISVGMGNQQKRIKLQIWD 68
Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
TAG E + + R YY GA A++ Y+ ++ +S+ L
Sbjct: 69 TAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEEL 104
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 58.0 bits (134), Expect = 8e-10
Identities = 31/99 (31%), Positives = 49/99 (49%)
Frame = +3
Query: 240 LKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDY 419
+ TK K++L+G VGK+ L LRF F + T+G F + + K
Sbjct: 1 MSTKSYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPS--FITTIGIDFKIRTIELDGKRI 58
Query: 420 SIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
+ IWDTAG E + +T YY GA ++ Y+ + +S+
Sbjct: 59 KLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSF 97
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 47.6 bits (108), Expect = 1e-06
Identities = 27/89 (30%), Positives = 48/89 (53%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
+I +LGS VGK+SL +++V F Y T+ F +K ++ K ++++ I DTAG
Sbjct: 8 RIAVLGSRSVGKSSLTVQYVENHFVES--YYPTIENTF-SKNIKYKGQEFATEIIDTAGQ 64
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
+ Y + + G H ++ Y +S S+
Sbjct: 65 DEYSILNSKHSIGIHGYVLVYSITSKSSF 93
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 46.4 bits (105), Expect = 3e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+V++G GKT L + F F E+ Y TV + A + + + +WDTAG
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTF-PEV-YVPTVFENYVAD-VEVDGRHIELALWDTAGQ 64
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
E Y+ + + Y +H +IC+ + ES
Sbjct: 65 EDYDRLRPLSYPDSHVVLICFSVDAPES 92
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 45.6 bits (103), Expect = 5e-06
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+V++G GKT L + F F E+ Y TV + A + + + +WDTAG
Sbjct: 8 KLVIVGDGACGKTCLLIVFSKGTF-PEV-YVPTVFENYVAD-VEVDGRHVELALWDTAGQ 64
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
E Y+ + + Y +H +IC+ S +S
Sbjct: 65 EDYDRLRPLSYPDSHVILICFAVDSPDS 92
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 45.2 bits (102), Expect = 6e-06
Identities = 25/89 (28%), Positives = 46/89 (51%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K V++G VGKT L + + +F ++ Y TV + M + Y++G++DTAG
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSD--YVPTVFDNYAVTVMIGD-EPYTLGLFDTAGQ 61
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E Y+ + + Y ++C+ +S S+
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVTSPASF 90
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 45.2 bits (102), Expect = 6e-06
Identities = 27/88 (30%), Positives = 39/88 (44%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
KIV+LG GKTSL F F Y+ T+ + + +WDTAG
Sbjct: 15 KIVILGDGAAGKTSLLNVFTKGYFPQV--YEPTIFENYIHDIFVD-GNSIELSLWDTAGQ 71
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
E Y+ + + Y H +IC+ S +S
Sbjct: 72 EEYDQLRSLSYSDTHVIMICFAVDSRDS 99
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 44.4 bits (100), Expect = 1e-05
Identities = 29/88 (32%), Positives = 42/88 (47%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+V++G GKTSL F F E Y TV + + R K + +WDTAG
Sbjct: 10 KLVVVGDGACGKTSLLSVFTLGYFPTE--YVPTVFENYVSDC-RVDGKSVQLALWDTAGQ 66
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
E YE + + Y AH ++ + S +S
Sbjct: 67 EEYERLRPMSYAKAHIILVGFAIDSPDS 94
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 41.1 bits (92), Expect = 1e-04
Identities = 25/86 (29%), Positives = 37/86 (43%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK+VL+G GKT+ R + F E Y T+G + + +WDTAG
Sbjct: 10 FKLVLVGDGGTGKTTFVKRHLTGEF--EKKYIATLGVEVHPLHFHTNFGEICFNVWDTAG 67
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSS 524
E + YY II ++ +S
Sbjct: 68 QEKLGGLRDGYYIQGQCGIIMFDVTS 93
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 40.7 bits (91), Expect = 1e-04
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+ ++G +GKTSL + +V F+ E T+G F K + + + + IWD G
Sbjct: 12 KVGMIGDSSIGKTSLMVTYVQGSFDEE--STQTLGVNFMEKTISIRNTEITFSIWDLGGQ 69
Query: 450 EXYEXMTRIYYXGAHAAIICYEPS 521
+ M + A A + ++ S
Sbjct: 70 REFVNMLPMVCNDAVAILFMFDLS 93
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 37.9 bits (84), Expect = 0.001
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRS-KXKDYSIGIWDTAG 446
K+V++G GKT L + F + F Y TV + K + +WDTAG
Sbjct: 16 KLVVVGDGGCGKTCLLIVFSSGTFPER--YVPTVFENYITDITYGPNSKVIELALWDTAG 73
Query: 447 SEXYEXMTRIYYXGAHAAIICY 512
E Y+ + + Y ++ ++C+
Sbjct: 74 QEEYDRLRPLSYPNSNVILLCF 95
>SPAC22F3.05c |alp41||ADP-ribosylation factor
Alp41|Schizosaccharomyces pombe|chr 1|||Manual
Length = 186
Score = 33.1 bits (72), Expect = 0.027
Identities = 20/90 (22%), Positives = 40/90 (44%)
Frame = +3
Query: 234 IVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXK 413
I+ + K+ + +++LLG ++ GKT++ + C N ++ N V F + + +
Sbjct: 6 ILRQQKLKEREVRVLLLGLDNAGKTTI----LKCLLNEDV---NEVSPTFGFQIRTLEVE 58
Query: 414 DYSIGIWDTAGSEXYEXMTRIYYXGAHAAI 503
IWD G + + Y+ A I
Sbjct: 59 GLRFTIWDIGGQKTLRNFWKNYFESTEAII 88
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.5 bits (58), Expect = 1.4
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Frame = +3
Query: 210 SLFYINRRIVLKTKMSRCDFKIVL---LGSEHVGKTSLXLRFVNCRFNAEIPYQNTV 371
+L + +R+ K+S+ D + L +GS+ GKT+L F+N N P NTV
Sbjct: 400 ALKVMRKRVSQNRKVSKYDRNVFLCFVVGSKSCGKTALLSSFINNNTNRLTP--NTV 454
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.6 bits (51), Expect = 9.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 216 IDYVK*NTMWKLXD*ILIINQSVDIKICNYL 124
I Y+ W L + II +S +ICNYL
Sbjct: 2178 ISYLGDQRRWFLSALVQIIEKSSSYEICNYL 2208
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,798,838
Number of Sequences: 5004
Number of extensions: 29777
Number of successful extensions: 95
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 225926624
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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