Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fe100P03_F_I02
(546 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 79 3e-15
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 71 8e-13
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 70 1e-12
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 69 3e-12
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 3e-12
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 67 8e-12
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 64 5e-11
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 61 7e-10
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 60 9e-10
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 60 9e-10
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 5e-09
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 55 3e-08
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 8e-08
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 52 4e-07
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 51 7e-07
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 50 2e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 48 4e-06
SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 7e-06
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 48 7e-06
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 46 2e-05
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 46 2e-05
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 46 3e-05
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 45 5e-05
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 43 1e-04
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 2e-04
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 41 6e-04
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 41 6e-04
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 40 0.001
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 39 0.002
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 38 0.004
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 37 0.009
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.009
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 36 0.016
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 36 0.022
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 36 0.029
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 35 0.050
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 35 0.050
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 34 0.066
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 34 0.066
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 34 0.087
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 33 0.12
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 33 0.12
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 33 0.20
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 33 0.20
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 33 0.20
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 32 0.27
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.27
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 32 0.35
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.46
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.1
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 30 1.1
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 29 2.5
SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09) 29 2.5
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 29 3.3
SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19) 28 4.3
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 28 4.3
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 78.6 bits (185), Expect = 3e-15
Identities = 38/92 (41%), Positives = 56/92 (60%)
Frame = +3
Query: 261 CDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDT 440
C FK+VLLG VGK+SL LRFV +F+ ++T+GAAF + + IWDT
Sbjct: 20 CQFKLVLLGESAVGKSSLVLRFVKGQFHEY--QESTIGAAFLTQTVCLDDTTVKFEIWDT 77
Query: 441 AGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
AG E Y + +YY GA AAI+ Y+ ++ +++
Sbjct: 78 AGQERYHSLAPMYYRGAQAAIVVYDITNQDTF 109
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 70.5 bits (165), Expect = 8e-13
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK+VLLG VGKTSL R F +NT+G C+K ++ K ++ +WDTAG
Sbjct: 12 FKVVLLGEAGVGKTSLFYRLKENHFTPG--RRNTIGIDSCSKFVKIGEKQVTLSVWDTAG 69
Query: 447 SEXYEXMTRIYYXGAHAAIICY 512
E + +T+ YY GAHA I+ +
Sbjct: 70 VERFRTVTKNYYRGAHACILMF 91
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 69.7 bits (163), Expect = 1e-12
Identities = 33/93 (35%), Positives = 52/93 (55%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK++L+G VGK+SL LRF + F+ Y +T+G F + + K + IWDTAG
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNT--YISTIGVDFKIRTLTVDGKTIKLQIWDTAG 66
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E + +T YY AH ++ Y+ + E++ L
Sbjct: 67 QERFRTLTTAYYRSAHGIVLIYDVNESETFLHL 99
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 68.9 bits (161), Expect = 3e-12
Identities = 32/90 (35%), Positives = 53/90 (58%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
+KIVL+G VGK+SL RF F+ E ++T+G F ++++ + K +WDTAG
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIES--KSTIGVEFATRSIQVEGKIIKAQVWDTAG 70
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E Y +T YY GA A++ Y+ + +++
Sbjct: 71 QERYRAITSAYYRGAVGAVLVYDLTKQKTF 100
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 68.9 bits (161), Expect = 3e-12
Identities = 34/92 (36%), Positives = 52/92 (56%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
KI+++G VGK+SL LRF + F+ +I T+G F K + + + IWDTAG
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGA--TIGVDFKVKTLTVEGNKAKLAIWDTAGQ 67
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E + +T YY GA I+ Y+ +S E++ L
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDTNSRETFDKL 99
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 67.3 bits (157), Expect = 8e-12
Identities = 33/90 (36%), Positives = 51/90 (56%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK++++G+ VGKTS R+ + F + + +TVG F K + K + IWDTAG
Sbjct: 22 FKLLIIGNSAVGKTSFLFRYADDSFTSA--FVSTVGIDFKVKTVFRNDKRVKLQIWDTAG 79
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E Y +T YY GA I+ Y+ ++ ES+
Sbjct: 80 QERYRTITTAYYRGAMGFILMYDITNEESF 109
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 64.5 bits (150), Expect = 5e-11
Identities = 32/93 (34%), Positives = 53/93 (56%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK+++LG +VGK+SL RF + FNA++ T+G F K + +WDTAG
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLC--TTIGVDFFIHDFDLDGKKVKLQLWDTAG 68
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E Y ++R ++ GA A++ ++ S ES+ +
Sbjct: 69 EEKYRALSRSFFRGADGALLVFDVSVKESFDSI 101
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 60.9 bits (141), Expect = 7e-10
Identities = 30/90 (33%), Positives = 49/90 (54%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FKIVL G VGK+S LR RF++ + +T+G F K + K Y++ +WDTAG
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSAL--NSTLGVDFQMKTLVVDGKTYALQLWDTAG 500
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E + + + Y+ A ++ Y+ + S+
Sbjct: 501 QERFRSIAKSYFRKADGVLLLYDVTCETSF 530
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 60.5 bits (140), Expect = 9e-10
Identities = 33/94 (35%), Positives = 50/94 (53%), Gaps = 1/94 (1%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQN-TVGAAFCAKAMRSKXKDYSIGIWDTA 443
FKI+L+G +VGKT L +F F P Q T+G F K + + + IWDTA
Sbjct: 8 FKIILVGDANVGKTCLVRQFTKGYFP---PNQGPTIGVDFTIKTVDVDGEKVKLQIWDTA 64
Query: 444 GSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
G E + +T+ YY A I+ Y+ ++ +S+ L
Sbjct: 65 GQERFRSITQSYYHNADGVIVTYDITNKKSFESL 98
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 60.5 bits (140), Expect = 9e-10
Identities = 31/93 (33%), Positives = 49/93 (52%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK+V +G VGK+S RF C + + T+G F K M + +I +WDTAG
Sbjct: 897 FKVVFIGDSGVGKSSFLHRF--CHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAG 954
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E + +T+ Y+ A +I Y+ ++ S+T L
Sbjct: 955 QERFRSITKQYFRKADGILIFYDVTAESSFTNL 987
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 58.0 bits (134), Expect = 5e-09
Identities = 32/89 (35%), Positives = 49/89 (55%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
KIV LG + VGK+SL RF+ F E YQ T+G F K + + + IWDTAG
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIF--EEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQ 222
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
E + + Y + AA+I ++ +++ S+
Sbjct: 223 ERFRCLIHSYIRDSEAALIVFDITNYTSF 251
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 55.2 bits (127), Expect = 3e-08
Identities = 24/61 (39%), Positives = 36/61 (59%)
Frame = +3
Query: 363 NTVGAAFCAKAMRSKXKDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTX 542
+T+G F +K + K + IWDTAG E + +TR YY GA A++ Y+ SS E++
Sbjct: 126 HTIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNS 185
Query: 543 L 545
L
Sbjct: 186 L 186
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 54.0 bits (124), Expect = 8e-08
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
Frame = +3
Query: 264 DFKIVLLGSEHVGKTSLXLRFVNCRFNAEIP-YQNTVGAAFCAKAMR-SKXKDYSIGIWD 437
+FK++++G GK S R+VN N P Y+ T+G F K ++ ++ + IW
Sbjct: 18 NFKVLVVGDILTGKQSFVKRYVN---NIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWL 74
Query: 438 TAGSEXYEXMTRIYYXGAHAAIICYE 515
AG E + MTR+YY GA A ++ ++
Sbjct: 75 IAGQERFSSMTRVYYKGADACVVLFD 100
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 54.0 bits (124), Expect = 8e-08
Identities = 27/83 (32%), Positives = 47/83 (56%)
Frame = +3
Query: 297 VGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGSEXYEXMTRI 476
VGK+SL RFV +F+ + + T+G F K ++ + Y++ IWDTAG E ++ +
Sbjct: 222 VGKSSLMNRFVCGKFDTQSFH--TIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRTP 279
Query: 477 YYXGAHAAIICYEPSSHESWTXL 545
+Y G+ ++ Y +S+T L
Sbjct: 280 FYRGSDLCLLVYAVDDAKSFTNL 302
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 1/84 (1%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FKI+++G +VGKT L R +F + T+G F K++ + + +WDTAG
Sbjct: 47 FKIIIIGDSNVGKTCLAYRLCTGKFPERT--ETTIGVDFWEKSLELNGEFVKLQLWDTAG 104
Query: 447 SEXY-EXMTRIYYXGAHAAIICYE 515
E + + M YY +A + Y+
Sbjct: 105 QERFRKSMVCHYYRNVNAVVFMYD 128
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 52.8 bits (121), Expect = 2e-07
Identities = 22/60 (36%), Positives = 33/60 (55%)
Frame = +3
Query: 357 YQNTVGAAFCAKAMRSKXKDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
Y +T+G F + + K + IWDTAG E + +T YY GAH I+ Y+ + ES+
Sbjct: 58 YISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESF 117
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 51.6 bits (118), Expect = 4e-07
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXK-DYSIGIWDTA 443
F+I+L+G VGK+SL +F +F TVG F + + K + IWDTA
Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENS--DPTVGVDFHVRVLELKGDVRIKLQIWDTA 71
Query: 444 GSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
G E + +T YY +I Y+ ++ +S+
Sbjct: 72 GQERFRSITYSYYRNTVGCLIIYDITNRDSF 102
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 50.8 bits (116), Expect = 7e-07
Identities = 30/82 (36%), Positives = 45/82 (54%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
F++V+LGS VGKTSL RF++ F+ + Y TVG + SK + + I DTAG
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQ--YTPTVGDLYEKSVTLSKDFNAFLEIMDTAG 165
Query: 447 SEXYEXMTRIYYXGAHAAIICY 512
S + M ++ A A ++ Y
Sbjct: 166 SYPFPAMKKLTIQNADAFVLVY 187
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 50.0 bits (114), Expect = 1e-06
Identities = 27/93 (29%), Positives = 46/93 (49%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
FK++++G VGKTSL RF F +TVG + + + WDTAG
Sbjct: 12 FKVLVVGDPGVGKTSLIRRFTKGYFCDNS--SSTVGVDVGTRVLDIHGDRVKLQCWDTAG 69
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E + +T+ YY A A I+ ++ ++ ++ +
Sbjct: 70 QEKFRGITQSYYRNADAVILVFDITNRGTFASI 102
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 49.6 bits (113), Expect = 2e-06
Identities = 31/93 (33%), Positives = 46/93 (49%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
F IV G+ VGKTSL LRF+ FN + Y T+ F K + + Y + I DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDD--YSPTI-EDFFIKHVFFNNETYELQIIDTSG 85
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
+ + M ++ A ++ Y ES+T L
Sbjct: 86 TYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKL 118
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 48.4 bits (110), Expect = 4e-06
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +3
Query: 357 YQNTVGAAFCAKAMRSKXKDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
Y T+G F + + + + IWDTAG E + +T YY G H I+ Y+ +S +++
Sbjct: 6 YITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTF 65
>SB_37124| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 60
Score = 48.0 bits (109), Expect = 5e-06
Identities = 22/49 (44%), Positives = 34/49 (69%)
Frame = +3
Query: 219 YINRRIVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQN 365
Y++ +++ +K+ D K+VLLG E+ GKTSL R+++ RFN PYQN
Sbjct: 15 YVHSAVIMGSKV---DVKVVLLGKEYSGKTSLVERYLHHRFNDNCPYQN 60
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/95 (28%), Positives = 48/95 (50%)
Frame = +3
Query: 252 MSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGI 431
M+ + K+V++G VGK++ + F E Y TV + + M K Y++G+
Sbjct: 1 MNYQNVKLVVVGDGGVGKSAFLITATTNAFPGE--YIPTVFDNYSSNIMLD-GKAYNVGL 57
Query: 432 WDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
WDTAG E Y+ + + Y ++C++ S S+
Sbjct: 58 WDTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSF 92
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 47.6 bits (108), Expect = 7e-06
Identities = 27/85 (31%), Positives = 45/85 (52%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
KI ++G VGK+SL ++FV +F Y T+ F K ++ K +++ + + DTAG
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDS--YDPTIENTF-TKNIKYKGQEFFLELVDTAGQ 64
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSS 524
+ Y + Y G H I+ Y +S
Sbjct: 65 DEYSIFPQSYSMGIHGYILVYAVTS 89
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/82 (31%), Positives = 36/82 (43%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
+KI L G VGKTS+ R F E + + F K I +WDT G
Sbjct: 9 YKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHIDQCFIPLVCICNKK-LKIHLWDTLG 67
Query: 447 SEXYEXMTRIYYXGAHAAIICY 512
E YE +TR +Y + ++ Y
Sbjct: 68 MEEYESLTRNHYSNSKVVLVVY 89
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/91 (30%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K V++G VGKT L + + +F +E Y TV + M + Y++G++DTAG
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSE--YVPTVFDNYAVTVMIG-GEPYTLGLFDTAGQ 61
Query: 450 EXYEXMTRIYYXGAHAAIICY---EPSSHES 533
E Y+ + + Y ++C+ PSS E+
Sbjct: 62 EDYDRLRPLSYPQTDVFLVCFSVVSPSSFEN 92
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDT 440
FK+VL+G VGK++L RF FN E ++T+G F ++++ K IWDT
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLE--SKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 44.8 bits (101), Expect = 5e-05
Identities = 23/83 (27%), Positives = 44/83 (53%)
Frame = +3
Query: 273 IVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGSE 452
++L+G GKT+L +V +FN + Y+ TV + + A+ + + +WDT+G E
Sbjct: 235 VILVGDSECGKTALLNAYVRNQFNEK--YEATVFNSL-STAVEVDGERIELTLWDTSGHE 291
Query: 453 XYEXMTRIYYXGAHAAIICYEPS 521
Y+ + + Y +IC++ S
Sbjct: 292 DYDHVRPLSYNNVDIVLICFDIS 314
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 43.2 bits (97), Expect = 1e-04
Identities = 26/94 (27%), Positives = 48/94 (51%)
Frame = +3
Query: 264 DFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTA 443
++K+V+LGS VGK++L ++FV +F + Y T+ F K + + I DTA
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQFVEK--YDPTI-EDFYRKEIEVDNNPSILEILDTA 59
Query: 444 GSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
G+E + M +Y ++ Y + +++ L
Sbjct: 60 GTEQFASMRDLYIKNGQGFLLVYSLINRQTFADL 93
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 42.3 bits (95), Expect = 2e-04
Identities = 26/88 (29%), Positives = 43/88 (48%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+V++G GKT L + F +F E+ Y TV + A + K + +WDTAG
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQF-PEV-YVPTVFENYVAD-IEVDGKQVELALWDTAGQ 5987
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHES 533
E Y+ + + Y ++C+ S +S
Sbjct: 5988 EDYDRLRPLSYPDTDVILMCFSIDSPDS 6015
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 41.1 bits (92), Expect = 6e-04
Identities = 16/35 (45%), Positives = 22/35 (62%)
Frame = +3
Query: 411 KDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYE 515
K Y IWDTAG E ++ + +YY A AAI+ Y+
Sbjct: 7 KAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYD 41
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 41.1 bits (92), Expect = 6e-04
Identities = 23/89 (25%), Positives = 46/89 (51%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+VL G +VGKTS +N N E+ T A + + + + + +WDT G+
Sbjct: 8 KVVLTGDNNVGKTSF---LINLTQN-ELEGTPTAFANY-ELGLEVGSQKFLLDLWDTEGT 62
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
Y+ + + Y G+ ++C++ S+ +++
Sbjct: 63 TEYDRLRPLTYQGSDIILLCFDISNRQTF 91
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 39.9 bits (89), Expect = 0.001
Identities = 15/45 (33%), Positives = 27/45 (60%)
Frame = +3
Query: 411 KDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
K + IWDTAG E + +T YY GA ++ Y+ ++ +S++ +
Sbjct: 3 KKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNI 47
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 39.5 bits (88), Expect = 0.002
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 11/103 (10%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAM-----------RSKXKD 416
K + LG VGKTSL ++ + FN + T+G F K + ++ +
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPR--FVPTIGIDFREKRVVHHPLNPDGERSTRGQR 165
Query: 417 YSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
+ +WDTAG E + +T ++ A ++ ++ + +S+ +
Sbjct: 166 IHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNI 208
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 39.1 bits (87), Expect = 0.002
Identities = 29/91 (31%), Positives = 45/91 (49%)
Frame = +3
Query: 264 DFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTA 443
D+KI +LG+ VGKTSL F +F+ + + TV F ++ YS I DTA
Sbjct: 12 DYKISILGAGGVGKTSLLKTFFGHKFSEK--HVPTVDDYF-IHSVNMDGVYYSTCIVDTA 68
Query: 444 GSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
G+ + M R+ A I+ + +S S+
Sbjct: 69 GTYAFPVMRRLAIHTCQAFIVVFAINSESSF 99
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 38.3 bits (85), Expect = 0.004
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +3
Query: 411 KDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYE 515
+D + IWDTAG E + +T+ YY + II Y+
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYD 127
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 37.1 bits (82), Expect = 0.009
Identities = 20/59 (33%), Positives = 31/59 (52%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTA 443
FKIVL+G VGK++L R+ F+ + + T+G + + + K IWDTA
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEFH--LGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 37.1 bits (82), Expect = 0.009
Identities = 25/89 (28%), Positives = 45/89 (50%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+V++G + VGK++L +RF+ RF E Y +T+ + + A + +I + DTAG
Sbjct: 863 KVVIIGEDGVGKSALTVRFLTKRFIGE--YDDTLESTYRQDA-EVAGEVVAIELTDTAGE 919
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESW 536
+ R G ++ Y +S S+
Sbjct: 920 NSPAKLERCLEIG-EVFVVLYSITSRHSF 947
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 37.1 bits (82), Expect = 0.009
Identities = 26/97 (26%), Positives = 44/97 (45%), Gaps = 5/97 (5%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKX-----KDYSIGIW 434
+I ++G VGKTSL + C + T+G K K K + + W
Sbjct: 8 RIAVVGDSGVGKTSLV--HLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFW 65
Query: 435 DTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
D GS +E I+Y G + I+ ++ ++ +S+T L
Sbjct: 66 DIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNL 102
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 36.3 bits (80), Expect = 0.016
Identities = 21/59 (35%), Positives = 35/59 (59%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
++V+LG + VGK++L +RF+ RF E Y T+ + ++ +D S+ I DTAG
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRFIGE--YDQTLESTH-RHILQIDNEDVSLDISDTAG 73
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 35.9 bits (79), Expect = 0.022
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 1/102 (0%)
Frame = +3
Query: 234 IVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRF-NAEIPYQNTVGAAFCAKAMRSKX 410
+VL+ K + K V++G VGKTSL + ++ F N+ +P T + +K
Sbjct: 10 LVLERKKEQ--LKCVIVGDGGVGKTSLLVSYMMDGFPNSYVP---TAFDTYHVTVEVNK- 63
Query: 411 KDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESW 536
K I DTAG E ++ + + Y A I+C+ S S+
Sbjct: 64 KLCMIEFCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSF 105
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 35.5 bits (78), Expect = 0.029
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = +3
Query: 432 WDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
W+ AG E + +T YY GAH +I Y+ + ES+ L
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNL 410
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 34.7 bits (76), Expect = 0.050
Identities = 22/85 (25%), Positives = 35/85 (41%)
Frame = +3
Query: 282 LGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGSEXYE 461
+G GKT+ R + F E Y T+G + +WDTAG E +
Sbjct: 38 VGDGGTGKTTFVKRHLTGEF--EKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFG 95
Query: 462 XMTRIYYXGAHAAIICYEPSSHESW 536
+ YY AII ++ +S ++
Sbjct: 96 GLRDGYYIQGQCAIIMFDVTSRVTY 120
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 34.7 bits (76), Expect = 0.050
Identities = 27/93 (29%), Positives = 41/93 (44%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAG 446
F++ ++GS VGK+S+ +R++ F EI Y C K Y I + DTAG
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFT-EIDY--------CGKL-------YDIEVVDTAG 2642
Query: 447 SEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
E Y A ++ + +S SW L
Sbjct: 2643 QEEYTSFRDSSLATGDAFLVLFAINSASSWNEL 2675
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 34.3 bits (75), Expect = 0.066
Identities = 23/100 (23%), Positives = 47/100 (47%)
Frame = +3
Query: 222 INRRIVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMR 401
+++ I L ++ +IV+LG + GKT++ + + IP T+G F + ++
Sbjct: 5 LSKVITLFSEFGNRQVRIVMLGLDAAGKTTILYKLKLKETVSTIP---TIG--FNVETLQ 59
Query: 402 SKXKDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPS 521
K+ ++ IWD G + + R Y+ G + + S
Sbjct: 60 -PTKNVTLTIWDVGGQDKIRPLWRHYFQGTEGLLFVVDSS 98
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 34.3 bits (75), Expect = 0.066
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 423 IGIWDTAGSEXYEXMTRIYYXGAHAAIICY 512
I +WDT G E YE +TR +Y + ++ Y
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVY 30
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 33.9 bits (74), Expect = 0.087
Identities = 19/84 (22%), Positives = 35/84 (41%)
Frame = +3
Query: 264 DFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTA 443
+FK +++G+ VGK+ L + N F+ + + K + I DTA
Sbjct: 350 EFKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTA 409
Query: 444 GSEXYEXMTRIYYXGAHAAIICYE 515
G E Y + Y+ G + ++
Sbjct: 410 GQERYFSILPAYFRGVQGVFLVFD 433
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 33.5 bits (73), Expect = 0.12
Identities = 22/59 (37%), Positives = 33/59 (55%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTA 443
++I LLG E VGKT+L +RF+ RF E Y T+ + K++ ++ I DTA
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRFLGE--YDPTIEDKY-RKSINIDDVTVTLEILDTA 61
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 33.5 bits (73), Expect = 0.12
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +3
Query: 429 IWDTAGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
IWDTAG E ++ + +Y GA ++ ++ + S+ L
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTL 39
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/84 (23%), Positives = 38/84 (45%)
Frame = +3
Query: 279 LLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGSEXY 458
++G ++ GKT++ R + +P T+G F + + K+ S +WD G +
Sbjct: 1 MIGLDNAGKTTILYRLKLEEVVSTVP---TLG--FNVETVT--YKNISFTVWDIGGQDKI 53
Query: 459 EXMTRIYYXGAHAAIICYEPSSHE 530
+ R+YY G I + + E
Sbjct: 54 RALWRVYYQGCQGIIFVVDSADRE 77
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 32.7 bits (71), Expect = 0.20
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = +3
Query: 435 DTAGSEXYEXMTRIYYXGAHAAIICYEPSSHES 533
DTAG E Y ++ Y GA AAI+ Y+ + S
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESS 310
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 32.7 bits (71), Expect = 0.20
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 2/107 (1%)
Frame = +3
Query: 210 SLFYIN-RRIVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTV-GAAF 383
++F ++ RR K+ R F +V+LG + GKTS+ R N Y NTV AF
Sbjct: 3 NMFVVSFRRFRPMLKLKR-PFHVVMLGLDKSGKTSILYR------NKFREYVNTVPTTAF 55
Query: 384 CAKAMRSKXKDYSIGIWDTAGSEXYEXMTRIYYXGAHAAIICYEPSS 524
+ +R K +WD G E + + Y A I + +S
Sbjct: 56 NVETIR-PFKGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTS 101
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 32.3 bits (70), Expect = 0.27
Identities = 18/50 (36%), Positives = 29/50 (58%)
Frame = +3
Query: 225 NRRIVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVG 374
NRR L + ++V+LG + VGK++L +R + RF E Y +T+G
Sbjct: 3 NRRKSLDPNDNVRSLRVVVLGQDGVGKSALTVRLLTKRFIGE--YDSTLG 50
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/92 (21%), Positives = 45/92 (48%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+V +G ++VGKTS + N + ++ + +K M K Y++ + DT G+
Sbjct: 11 KVVFVGDKNVGKTSFL--YAATTHNFPTGFIASIFDGY-SKTMEIDGKRYTVLLCDTPGT 67
Query: 450 EXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
+ ++ A ++C++ ++ ES+ +
Sbjct: 68 MHPRIPPQHWFQYASVFLLCFDIANRESFANI 99
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 31.9 bits (69), Expect = 0.35
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVG 374
+ +V+LG+ VGKT+L +RFV RF E Y T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNE--YDPTLG 358
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 31.5 bits (68), Expect = 0.46
Identities = 10/24 (41%), Positives = 17/24 (70%)
Frame = +3
Query: 411 KDYSIGIWDTAGSEXYEXMTRIYY 482
+D + +WDTAG E ++ +T+ YY
Sbjct: 32 EDIRLMLWDTAGQEEFDAITKAYY 55
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +3
Query: 252 MSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVG 374
MS FK++++G VGKTS R+V+ N Y+ T+G
Sbjct: 18 MSEILFKVLIVGDATVGKTSFVQRYVH--GNTRREYKPTIG 56
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 30.3 bits (65), Expect = 1.1
Identities = 13/26 (50%), Positives = 18/26 (69%)
Frame = +3
Query: 264 DFKIVLLGSEHVGKTSLXLRFVNCRF 341
D+ +VLLG VGK++L +RF RF
Sbjct: 127 DYSLVLLGQAGVGKSALLVRFCTGRF 152
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/26 (46%), Positives = 21/26 (80%)
Frame = +3
Query: 264 DFKIVLLGSEHVGKTSLXLRFVNCRF 341
++K+V+LGS VGK++L ++FV +F
Sbjct: 3 EYKVVVLGSGGVGKSALTVQFVTGQF 28
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 29.1 bits (62), Expect = 2.5
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFN 344
FK++L+G VGKT + RF + FN
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFN 35
>SB_6133| Best HMM Match : ABC_tran (HMM E-Value=9e-09)
Length = 562
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = -3
Query: 472 LVIXSYXSLPAVSQMPIL*SFXFDRIALAQNAAPTVF 362
LVI + +PAV + + SF F+ AQ PTVF
Sbjct: 22 LVIAALLYIPAVILLAYICSFAFNNWETAQQVLPTVF 58
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTV 371
FK++++G VGKTSL R+V+ F+ + Y+ TV
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFS--VHYRATV 704
>SB_10598| Best HMM Match : LRR_1 (HMM E-Value=4.4e-19)
Length = 811
Score = 28.3 bits (60), Expect = 4.3
Identities = 20/76 (26%), Positives = 31/76 (40%)
Frame = +3
Query: 270 KIVLLGSEHVGKTSLXLRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDTAGS 449
K+VLLG GKTS V C + TVG + + + + + D AG
Sbjct: 262 KLVLLGESGAGKTSCAHGLVECEAINQTLNDGTVGVVI--RNWQVEPDGLEVQVVDCAGQ 319
Query: 450 EXYEXMTRIYYXGAHA 497
Y+ +T ++ A
Sbjct: 320 RRYQ-LTHPFFLSEEA 334
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 28.3 bits (60), Expect = 4.3
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 228 RRIVLKTKMSRCDFKIVLLGSEHVGKTSLXLRFVNCRFNAE 350
R+ +L+ K+ +I+L+G + GKTSL + RF+ +
Sbjct: 349 RKALLEGKVQVYRGRIMLIGQDRAGKTSLKKSLLGLRFDPQ 389
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 27.9 bits (59), Expect = 5.7
Identities = 21/95 (22%), Positives = 40/95 (42%), Gaps = 2/95 (2%)
Frame = +3
Query: 267 FKIVLLGSEHVGKTSLX--LRFVNCRFNAEIPYQNTVGAAFCAKAMRSKXKDYSIGIWDT 440
+K+VL+G VGK+ + L + + Y+ T G + + + + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGH---ASYFTASNSCHLYLLDT 70
Query: 441 AGSEXYEXMTRIYYXGAHAAIICYEPSSHESWTXL 545
+G E Y +T+IY + + + S + L
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSL 105
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,969,592
Number of Sequences: 59808
Number of extensions: 202951
Number of successful extensions: 330
Number of sequences better than 10.0: 65
Number of HSP's better than 10.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 308
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1252112599
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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