Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fe100P03_F_I01
         (641 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_1071 - 8755157-8755510                                           51   9e-07
06_01_1072 - 8756386-8756706                                           44   8e-05
01_01_0530 - 3877337-3877396,3877709-3877837,3877954-3878221,387...    30   1.4  
03_05_0897 - 28605324-28605928,28606725-28606899                       28   5.5  
12_01_0444 - 3502460-3502522,3502737-3502741,3502987-3503051,350...    27   9.6  

>06_01_1071 - 8755157-8755510
          Length = 117

 Score = 50.8 bits (116), Expect = 9e-07
 Identities = 29/72 (40%), Positives = 40/72 (55%)
 Frame = +2

Query: 263 RALDFEVFGRVQGVFFRKYTKEQADKLGLRGXCKNRGHRTVLGHMQGTLDKIEVMMHWLK 442
           +A+   V GRVQGV FR +T E A+ LGL G  +NR   TV   + G   K++ M+    
Sbjct: 26  KAVRVVVKGRVQGVGFRDWTAETAESLGLAGWVRNRRDGTVEALLSGDPAKVDEMVSRHL 85

Query: 443 TTGSPSSKIDKV 478
             GSP+S +  V
Sbjct: 86  PVGSPASAVTAV 97


>06_01_1072 - 8756386-8756706
          Length = 106

 Score = 44.4 bits (100), Expect = 8e-05
 Identities = 24/56 (42%), Positives = 33/56 (58%)
 Frame = +2

Query: 263 RALDFEVFGRVQGVFFRKYTKEQADKLGLRGXCKNRGHRTVLGHMQGTLDKIEVMM 430
           +A+   V GRVQGVFFR +T E A  LGL G  +NR   TV   + G   +++ M+
Sbjct: 15  KAVRVVVKGRVQGVFFRDWTVETARALGLAGWVRNRRDGTVEALLSGDPARVDEMV 70


>01_01_0530 -
           3877337-3877396,3877709-3877837,3877954-3878221,
           3878385-3878776,3879003-3879119,3879209-3879304,
           3879775-3879948,3880077-3880243,3880800-3880965,
           3881040-3881178,3881767-3881901,3882157-3882161
          Length = 615

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 257 MFRALDFEVFGRVQGVFFRKYTKEQADKLGLRGXCKNRG-HRTVLGHMQGTLDK 415
           M RA   E++G++QGVF     ++    L L G C ++  +R+ +     ++DK
Sbjct: 309 MNRASSLEIYGKMQGVFIEMDCEKNMPLLVLYGKCSSKSTYRSKIVLQTDSVDK 362


>03_05_0897 - 28605324-28605928,28606725-28606899
          Length = 259

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/62 (29%), Positives = 27/62 (43%)
 Frame = -3

Query: 399 CICPKTVL*PLFLXQPRSPSLSACSLVYFRKKTP*TRPNTSKSRARNIVAMIGLQLTQHS 220
           C CPK VL    + QP++ S+      + R+     R   S    R  V   GL+  +H+
Sbjct: 89  CCCPKLVLKRGTMFQPKNTSMKRTRTKFARRVNSLLRHLCSPPTLRKFVVKFGLR-RKHT 147

Query: 219 RH 214
            H
Sbjct: 148 CH 149


>12_01_0444 -
           3502460-3502522,3502737-3502741,3502987-3503051,
           3503301-3503369,3503487-3503579,3503667-3503770,
           3503926-3504006,3504096-3504167,3504227-3504231,
           3505788-3505865,3506849-3506978,3507216-3507406,
           3507528-3507588,3507916-3508025,3508155-3508239
          Length = 403

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 15/38 (39%), Positives = 20/38 (52%)
 Frame = +3

Query: 513 PMIISVLLKTIKIANRFNISVLLVGIPEVNVICSTHDW 626
           P+I S++L  +K  N  N  V    IPE  +  STH W
Sbjct: 47  PIIGSMVLYILKKDNLINKLVQDAEIPEPPLFTSTHSW 84


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,834,707
Number of Sequences: 37544
Number of extensions: 234671
Number of successful extensions: 460
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1584867848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)